Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 AL359314.1-201ENST00000616913 261 ntBASIC1.53□□□□□ -2.16
ZNF544Q6NX49 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.53□□□□□ -2.16
ZNF544Q6NX49 MIR1244-3-201ENST00000635744 85 ntBASIC1.53□□□□□ -2.16
ZNF544Q6NX49 MIR1244-2-201ENST00000636449 85 ntBASIC1.53□□□□□ -2.16
ZNF544Q6NX49 MIR1244-4-202ENST00000636813 85 ntBASIC1.53□□□□□ -2.16
ZNF544Q6NX49 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.53□□□□□ -2.17
ZNF544Q6NX49 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
ZNF544Q6NX49 RNU6-222P-201ENST00000362438 107 ntBASIC1.52□□□□□ -2.17
ZNF544Q6NX49 Y_RNA.140-201ENST00000363474 103 ntBASIC1.52□□□□□ -2.17
ZNF544Q6NX49 Y_RNA.419-201ENST00000384041 102 ntBASIC1.52□□□□□ -2.17
ZNF544Q6NX49 Y_RNA.496-201ENST00000384444 101 ntBASIC1.52□□□□□ -2.17
ZNF544Q6NX49 Y_RNA.557-201ENST00000384680 107 ntBASIC1.52□□□□□ -2.17
ZNF544Q6NX49 RNU6-541P-201ENST00000384709 110 ntBASIC1.52□□□□□ -2.17
ZNF544Q6NX49 MIR586-201ENST00000385035 97 ntBASIC1.52□□□□□ -2.17
ZNF544Q6NX49 MIR300-201ENST00000401138 83 ntBASIC1.52□□□□□ -2.17
ZNF544Q6NX49 MIR1262-201ENST00000408276 93 ntBASIC1.52□□□□□ -2.17
ZNF544Q6NX49 RNA5SP504-201ENST00000410676 117 ntBASIC1.52□□□□□ -2.17
ZNF544Q6NX49 AC092423.1-201ENST00000430165 186 ntBASIC1.52□□□□□ -2.17
ZNF544Q6NX49 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.52□□□□□ -2.17
ZNF544Q6NX49 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.52□□□□□ -2.17
ZNF544Q6NX49 UBE2V1P7-201ENST00000446395 340 ntBASIC1.52□□□□□ -2.17
ZNF544Q6NX49 HMGN2P18-201ENST00000450680 270 ntBASIC1.52□□□□□ -2.17
ZNF544Q6NX49 AC007395.1-201ENST00000451333 677 ntBASIC1.52□□□□□ -2.17
ZNF544Q6NX49 NDUFB4P10-201ENST00000452541 359 ntBASIC1.52□□□□□ -2.17
ZNF544Q6NX49 AL137159.1-201ENST00000452808 512 ntBASIC1.52□□□□□ -2.17
ZNF544Q6NX49 MIR2053-201ENST00000459295 91 ntBASIC1.52□□□□□ -2.17
ZNF544Q6NX49 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.52□□□□□ -2.17
ZNF544Q6NX49 RNA5SP490-201ENST00000517141 136 ntBASIC1.52□□□□□ -2.17
ZNF544Q6NX49 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.52□□□□□ -2.17
ZNF544Q6NX49 UBL5P4-201ENST00000562584 236 ntBASIC1.52□□□□□ -2.17
ZNF544Q6NX49 AC026271.5-201ENST00000577873 130 ntBASIC1.52□□□□□ -2.17
ZNF544Q6NX49 AC125232.2-201ENST00000592457 143 ntBASIC1.52□□□□□ -2.17
ZNF544Q6NX49 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.52□□□□□ -2.17
ZNF544Q6NX49 uc_338.22-201ENST00000622722 187 ntBASIC1.52□□□□□ -2.17
ZNF544Q6NX49 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.52□□□□□ -2.17
ZNF544Q6NX49 MTND4P29-201ENST00000503122 1372 ntBASIC1.51□□□□□ -2.17
ZNF544Q6NX49 MIR340-201ENST00000362125 95 ntBASIC1.51□□□□□ -2.17
ZNF544Q6NX49 RNA5SP190-201ENST00000365222 118 ntBASIC1.51□□□□□ -2.17
ZNF544Q6NX49 MIR549A-201ENST00000385268 96 ntBASIC1.51□□□□□ -2.17
ZNF544Q6NX49 AL627390.1-201ENST00000396055 340 ntBASIC1.51□□□□□ -2.17
ZNF544Q6NX49 Y_RNA.592-201ENST00000410274 109 ntBASIC1.51□□□□□ -2.17
ZNF544Q6NX49 AC123900.1-201ENST00000420390 96 ntBASIC1.51□□□□□ -2.17
ZNF544Q6NX49 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.51□□□□□ -2.17
ZNF544Q6NX49 U8.22-201ENST00000459141 133 ntBASIC1.51□□□□□ -2.17
ZNF544Q6NX49 RNU7-14P-201ENST00000459331 62 ntBASIC1.51□□□□□ -2.17
ZNF544Q6NX49 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.51□□□□□ -2.17
ZNF544Q6NX49 AC105758.1-201ENST00000506038 399 ntBASIC1.51□□□□□ -2.17
ZNF544Q6NX49 SNORA25.14-201ENST00000516481 132 ntBASIC1.51□□□□□ -2.17
ZNF544Q6NX49 AC144568.1-201ENST00000520139 137 ntBASIC1.51□□□□□ -2.17
ZNF544Q6NX49 MIR5006-201ENST00000583027 110 ntBASIC1.51□□□□□ -2.17
ZNF544Q6NX49 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.51□□□□□ -2.17
ZNF544Q6NX49 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
ZNF544Q6NX49 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.5□□□□□ -2.17
ZNF544Q6NX49 Y_RNA.358-201ENST00000365491 99 ntBASIC1.5□□□□□ -2.17
ZNF544Q6NX49 Y_RNA.394-201ENST00000383942 103 ntBASIC1.5□□□□□ -2.17
ZNF544Q6NX49 Y_RNA.428-201ENST00000384078 102 ntBASIC1.5□□□□□ -2.17
ZNF544Q6NX49 RNU6-1145P-201ENST00000384246 107 ntBASIC1.5□□□□□ -2.17
ZNF544Q6NX49 SNORD14D-201ENST00000384390 87 ntBASIC1.5□□□□□ -2.17
ZNF544Q6NX49 MIR329-1-201ENST00000385028 80 ntBASIC1.5□□□□□ -2.17
ZNF544Q6NX49 MIR29C-201ENST00000385231 88 ntBASIC1.5□□□□□ -2.17
ZNF544Q6NX49 SNORA40.19-201ENST00000390846 128 ntBASIC1.5□□□□□ -2.17
ZNF544Q6NX49 SNORA69.1-201ENST00000390904 137 ntBASIC1.5□□□□□ -2.17
ZNF544Q6NX49 SNORA67.5-201ENST00000391036 107 ntBASIC1.5□□□□□ -2.17
ZNF544Q6NX49 MIR1283-1-201ENST00000408494 87 ntBASIC1.5□□□□□ -2.17
ZNF544Q6NX49 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.5□□□□□ -2.17
ZNF544Q6NX49 AL603825.1-201ENST00000438481 80 ntBASIC1.5□□□□□ -2.17
ZNF544Q6NX49 MTCO1P44-201ENST00000441935 243 ntBASIC1.5□□□□□ -2.17
ZNF544Q6NX49 AC245102.2-201ENST00000448956 180 ntBASIC1.5□□□□□ -2.17
ZNF544Q6NX49 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.5□□□□□ -2.17
ZNF544Q6NX49 RNU1-131P-201ENST00000458943 161 ntBASIC1.5□□□□□ -2.17
ZNF544Q6NX49 AC091179.3-201ENST00000474761 144 ntBASIC1.5□□□□□ -2.17
ZNF544Q6NX49 HMGN2P9-201ENST00000476875 229 ntBASIC1.5□□□□□ -2.17
ZNF544Q6NX49 RPS29P11-201ENST00000496507 171 ntBASIC1.5□□□□□ -2.17
ZNF544Q6NX49 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.5□□□□□ -2.17
ZNF544Q6NX49 RN7SKP49-201ENST00000516675 260 ntBASIC1.5□□□□□ -2.17
ZNF544Q6NX49 SNORD116.3-201ENST00000517176 78 ntBASIC1.5□□□□□ -2.17
ZNF544Q6NX49 AP000942.3-201ENST00000603702 160 ntBASIC1.5□□□□□ -2.17
ZNF544Q6NX49 SNORD11B-201ENST00000607707 90 ntBASIC1.5□□□□□ -2.17
ZNF544Q6NX49 AC090971.5-201ENST00000621102 293 ntBASIC1.5□□□□□ -2.17
ZNF544Q6NX49 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.5□□□□□ -2.17
ZNF544Q6NX49 AC134503.1-201ENST00000633048 54 ntBASIC1.5□□□□□ -2.17
ZNF544Q6NX49 MIR4272-201ENST00000635924 64 ntBASIC1.5□□□□□ -2.17
ZNF544Q6NX49 AC068205.3-201ENST00000636385 468 ntBASIC1.5□□□□□ -2.17
ZNF544Q6NX49 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
ZNF544Q6NX49 LINC02555-201ENST00000563933 1951 ntBASIC1.49□□□□□ -2.17
ZNF544Q6NX49 RNU6-1164P-201ENST00000364428 107 ntBASIC1.49□□□□□ -2.17
ZNF544Q6NX49 Y_RNA.813-201ENST00000364639 102 ntBASIC1.49□□□□□ -2.17
ZNF544Q6NX49 RNU6-793P-201ENST00000384233 104 ntBASIC1.49□□□□□ -2.17
ZNF544Q6NX49 RNU6-318P-201ENST00000384283 103 ntBASIC1.49□□□□□ -2.17
ZNF544Q6NX49 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.49□□□□□ -2.17
ZNF544Q6NX49 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.49□□□□□ -2.17
ZNF544Q6NX49 AL357134.1-201ENST00000445848 426 ntBASIC1.49□□□□□ -2.17
ZNF544Q6NX49 CHEK2P4-201ENST00000450340 246 ntBASIC1.49□□□□□ -2.17
ZNF544Q6NX49 RNU1-98P-201ENST00000458992 160 ntBASIC1.49□□□□□ -2.17
ZNF544Q6NX49 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.49□□□□□ -2.17
ZNF544Q6NX49 RNU6-475P-201ENST00000516073 104 ntBASIC1.49□□□□□ -2.17
ZNF544Q6NX49 RNU6-970P-201ENST00000516312 107 ntBASIC1.49□□□□□ -2.17
ZNF544Q6NX49 Y_RNA.683-201ENST00000516508 93 ntBASIC1.49□□□□□ -2.17
ZNF544Q6NX49 RNU2-34P-201ENST00000516534 121 ntBASIC1.49□□□□□ -2.17
ZNF544Q6NX49 AC091144.1-201ENST00000519573 138 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms