Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 AC005840.1-201ENST00000498412 377 ntBASIC3.7□□□□□ -1.82
PRPF40BQ6NWY9 RNA5SP112-201ENST00000515937 99 ntBASIC3.7□□□□□ -1.82
PRPF40BQ6NWY9 RN7SKP164-201ENST00000516138 266 ntBASIC3.7□□□□□ -1.82
PRPF40BQ6NWY9 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.7□□□□□ -1.82
PRPF40BQ6NWY9 AC103810.1-201ENST00000579873 453 ntBASIC3.7□□□□□ -1.82
PRPF40BQ6NWY9 U6.115-201ENST00000636045 103 ntBASIC3.7□□□□□ -1.82
PRPF40BQ6NWY9 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
PRPF40BQ6NWY9 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
PRPF40BQ6NWY9 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
PRPF40BQ6NWY9 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PRPF40BQ6NWY9 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
PRPF40BQ6NWY9 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
PRPF40BQ6NWY9 RNU6-899P-201ENST00000363947 107 ntBASIC3.69□□□□□ -1.82
PRPF40BQ6NWY9 SNORA67.2-201ENST00000384300 149 ntBASIC3.69□□□□□ -1.82
PRPF40BQ6NWY9 MIR548B-201ENST00000385247 97 ntBASIC3.69□□□□□ -1.82
PRPF40BQ6NWY9 MIR591-201ENST00000385290 95 ntBASIC3.69□□□□□ -1.82
PRPF40BQ6NWY9 RNU6-381P-201ENST00000391259 108 ntBASIC3.69□□□□□ -1.82
PRPF40BQ6NWY9 AC074290.1-201ENST00000448883 135 ntBASIC3.69□□□□□ -1.82
PRPF40BQ6NWY9 AC146507.2-201ENST00000460608 476 ntBASIC3.69□□□□□ -1.82
PRPF40BQ6NWY9 RN7SL20P-201ENST00000488827 297 ntBASIC3.69□□□□□ -1.82
PRPF40BQ6NWY9 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.69□□□□□ -1.82
PRPF40BQ6NWY9 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.69□□□□□ -1.82
PRPF40BQ6NWY9 AC245166.1-201ENST00000521012 253 ntBASIC3.69□□□□□ -1.82
PRPF40BQ6NWY9 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.69□□□□□ -1.82
PRPF40BQ6NWY9 AC091544.4-201ENST00000555268 342 ntBASIC3.69□□□□□ -1.82
PRPF40BQ6NWY9 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.69□□□□□ -1.82
PRPF40BQ6NWY9 AC091895.1-201ENST00000624494 256 ntBASIC3.69□□□□□ -1.82
PRPF40BQ6NWY9 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
PRPF40BQ6NWY9 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PRPF40BQ6NWY9 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PRPF40BQ6NWY9 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.69□□□□□ -1.82
PRPF40BQ6NWY9 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.69□□□□□ -1.82
PRPF40BQ6NWY9 RNU6-1048P-201ENST00000364054 107 ntBASIC3.68□□□□□ -1.82
PRPF40BQ6NWY9 RNU4-84P-201ENST00000364200 139 ntBASIC3.68□□□□□ -1.82
PRPF40BQ6NWY9 RNA5SP139-201ENST00000364340 117 ntBASIC3.68□□□□□ -1.82
PRPF40BQ6NWY9 RNU6-275P-201ENST00000364910 107 ntBASIC3.68□□□□□ -1.82
PRPF40BQ6NWY9 Y_RNA.488-201ENST00000384403 102 ntBASIC3.68□□□□□ -1.82
PRPF40BQ6NWY9 SNORA46-201ENST00000384762 135 ntBASIC3.68□□□□□ -1.82
PRPF40BQ6NWY9 MIR586-201ENST00000385035 97 ntBASIC3.68□□□□□ -1.82
PRPF40BQ6NWY9 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.68□□□□□ -1.82
PRPF40BQ6NWY9 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.68□□□□□ -1.82
PRPF40BQ6NWY9 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.68□□□□□ -1.82
PRPF40BQ6NWY9 AC021269.2-201ENST00000532318 330 ntBASIC3.68□□□□□ -1.82
PRPF40BQ6NWY9 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.68□□□□□ -1.82
PRPF40BQ6NWY9 AC079600.2-201ENST00000550076 130 ntBASIC3.68□□□□□ -1.82
PRPF40BQ6NWY9 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.68□□□□□ -1.82
PRPF40BQ6NWY9 AC069294.1-201ENST00000608397 350 ntBASIC3.68□□□□□ -1.82
PRPF40BQ6NWY9 Y_RNA.802-201ENST00000614892 130 ntBASIC3.68□□□□□ -1.82
PRPF40BQ6NWY9 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PRPF40BQ6NWY9 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
PRPF40BQ6NWY9 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PRPF40BQ6NWY9 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRPF40BQ6NWY9 RNU6-103P-201ENST00000363686 107 ntBASIC3.67□□□□□ -1.82
PRPF40BQ6NWY9 RNU4-10P-201ENST00000364383 140 ntBASIC3.67□□□□□ -1.82
PRPF40BQ6NWY9 Y_RNA.368-201ENST00000365547 113 ntBASIC3.67□□□□□ -1.82
PRPF40BQ6NWY9 Y_RNA.400-201ENST00000383963 111 ntBASIC3.67□□□□□ -1.82
PRPF40BQ6NWY9 RNU6-1083P-201ENST00000384022 107 ntBASIC3.67□□□□□ -1.82
PRPF40BQ6NWY9 Y_RNA.456-201ENST00000384232 111 ntBASIC3.67□□□□□ -1.82
PRPF40BQ6NWY9 RNU6-851P-201ENST00000384565 107 ntBASIC3.67□□□□□ -1.82
PRPF40BQ6NWY9 AC087499.2-201ENST00000432861 149 ntBASIC3.67□□□□□ -1.82
PRPF40BQ6NWY9 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.67□□□□□ -1.82
PRPF40BQ6NWY9 RNU6-1098P-201ENST00000516772 96 ntBASIC3.67□□□□□ -1.82
PRPF40BQ6NWY9 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.67□□□□□ -1.82
PRPF40BQ6NWY9 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.67□□□□□ -1.82
PRPF40BQ6NWY9 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRPF40BQ6NWY9 AC091152.2-201ENST00000591628 2569 ntBASIC3.66□□□□□ -1.82
PRPF40BQ6NWY9 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.66□□□□□ -1.82
PRPF40BQ6NWY9 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PRPF40BQ6NWY9 RNU6-1205P-201ENST00000363625 106 ntBASIC3.66□□□□□ -1.82
PRPF40BQ6NWY9 Y_RNA.497-201ENST00000384447 98 ntBASIC3.66□□□□□ -1.82
PRPF40BQ6NWY9 AL355497.1-201ENST00000406262 551 ntBASIC3.66□□□□□ -1.82
PRPF40BQ6NWY9 AC009414.1-201ENST00000427200 443 ntBASIC3.66□□□□□ -1.82
PRPF40BQ6NWY9 CR769767.1-201ENST00000436337 346 ntBASIC3.66□□□□□ -1.82
PRPF40BQ6NWY9 EEF1B2P7-201ENST00000451177 676 ntBASIC3.66□□□□□ -1.82
PRPF40BQ6NWY9 RN7SL75P-201ENST00000461926 281 ntBASIC3.66□□□□□ -1.82
PRPF40BQ6NWY9 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.66□□□□□ -1.82
PRPF40BQ6NWY9 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.66□□□□□ -1.82
PRPF40BQ6NWY9 MIR3684-201ENST00000579779 74 ntBASIC3.66□□□□□ -1.82
PRPF40BQ6NWY9 MIR4744-201ENST00000581563 82 ntBASIC3.66□□□□□ -1.82
PRPF40BQ6NWY9 AC110079.1-202ENST00000635213 138 ntBASIC3.66□□□□□ -1.82
PRPF40BQ6NWY9 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
PRPF40BQ6NWY9 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
PRPF40BQ6NWY9 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PRPF40BQ6NWY9 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
PRPF40BQ6NWY9 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
PRPF40BQ6NWY9 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.65□□□□□ -1.82
PRPF40BQ6NWY9 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PRPF40BQ6NWY9 RNU6-486P-201ENST00000363116 107 ntBASIC3.65□□□□□ -1.83
PRPF40BQ6NWY9 SNORD32B-201ENST00000364460 84 ntBASIC3.65□□□□□ -1.83
PRPF40BQ6NWY9 RNU1-101P-201ENST00000391171 127 ntBASIC3.65□□□□□ -1.83
PRPF40BQ6NWY9 RPL21P3-201ENST00000395517 478 ntBASIC3.65□□□□□ -1.83
PRPF40BQ6NWY9 EBAG9P1-201ENST00000418955 543 ntBASIC3.65□□□□□ -1.83
PRPF40BQ6NWY9 AL121890.1-201ENST00000435457 205 ntBASIC3.65□□□□□ -1.83
PRPF40BQ6NWY9 UQCRHP3-201ENST00000451503 251 ntBASIC3.65□□□□□ -1.83
PRPF40BQ6NWY9 AC114982.1-201ENST00000469402 321 ntBASIC3.65□□□□□ -1.83
PRPF40BQ6NWY9 MIR4753-201ENST00000585119 83 ntBASIC3.65□□□□□ -1.83
PRPF40BQ6NWY9 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.65□□□□□ -1.83
PRPF40BQ6NWY9 UCA1.1-201ENST00000620952 75 ntBASIC3.65□□□□□ -1.83
PRPF40BQ6NWY9 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.65□□□□□ -1.83
PRPF40BQ6NWY9 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms