Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 RNU6-20P-201ENST00000384106 107 ntBASIC2.19□□□□□ -2.06
RUNDC3AQ59EK9 RNU6-1160P-201ENST00000384546 104 ntBASIC2.19□□□□□ -2.06
RUNDC3AQ59EK9 MIR606-201ENST00000384851 96 ntBASIC2.19□□□□□ -2.06
RUNDC3AQ59EK9 MIR597-201ENST00000384968 97 ntBASIC2.19□□□□□ -2.06
RUNDC3AQ59EK9 AC060773.1-201ENST00000421698 310 ntBASIC2.19□□□□□ -2.06
RUNDC3AQ59EK9 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.19□□□□□ -2.06
RUNDC3AQ59EK9 U8.20-201ENST00000459445 131 ntBASIC2.19□□□□□ -2.06
RUNDC3AQ59EK9 RNU6-764P-201ENST00000516396 105 ntBASIC2.19□□□□□ -2.06
RUNDC3AQ59EK9 AC006504.6-201ENST00000590142 199 ntBASIC2.19□□□□□ -2.06
RUNDC3AQ59EK9 AC006023.1-201ENST00000603944 259 ntBASIC2.19□□□□□ -2.06
RUNDC3AQ59EK9 AC103810.6-201ENST00000606708 136 ntBASIC2.19□□□□□ -2.06
RUNDC3AQ59EK9 AC022513.1-201ENST00000624512 117 ntBASIC2.19□□□□□ -2.06
RUNDC3AQ59EK9 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.19□□□□□ -2.06
RUNDC3AQ59EK9 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
RUNDC3AQ59EK9 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
RUNDC3AQ59EK9 SNORA63.7-201ENST00000365579 123 ntBASIC2.18□□□□□ -2.06
RUNDC3AQ59EK9 RNU4-52P-201ENST00000384209 138 ntBASIC2.18□□□□□ -2.06
RUNDC3AQ59EK9 Y_RNA.510-201ENST00000384511 114 ntBASIC2.18□□□□□ -2.06
RUNDC3AQ59EK9 SNORA40.19-201ENST00000390846 128 ntBASIC2.18□□□□□ -2.06
RUNDC3AQ59EK9 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
RUNDC3AQ59EK9 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.18□□□□□ -2.06
RUNDC3AQ59EK9 RPS15AP28-201ENST00000435088 386 ntBASIC2.18□□□□□ -2.06
RUNDC3AQ59EK9 AC005002.2-201ENST00000438228 269 ntBASIC2.18□□□□□ -2.06
RUNDC3AQ59EK9 RNU6-397P-201ENST00000516226 104 ntBASIC2.18□□□□□ -2.06
RUNDC3AQ59EK9 AC025647.1-201ENST00000517879 253 ntBASIC2.18□□□□□ -2.06
RUNDC3AQ59EK9 Y_RNA.772-201ENST00000606692 102 ntBASIC2.18□□□□□ -2.06
RUNDC3AQ59EK9 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.18□□□□□ -2.06
RUNDC3AQ59EK9 AC006001.4-201ENST00000622243 395 ntBASIC2.18□□□□□ -2.06
RUNDC3AQ59EK9 MIR6766-201ENST00000622641 72 ntBASIC2.18□□□□□ -2.06
RUNDC3AQ59EK9 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RUNDC3AQ59EK9 AL159152.1-201ENST00000635019 2587 ntBASIC2.18□□□□□ -2.06
RUNDC3AQ59EK9 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
RUNDC3AQ59EK9 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.18□□□□□ -2.06
RUNDC3AQ59EK9 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RUNDC3AQ59EK9 RNU6-626P-201ENST00000363354 107 ntBASIC2.17□□□□□ -2.06
RUNDC3AQ59EK9 RNA5SP68-201ENST00000363885 119 ntBASIC2.17□□□□□ -2.06
RUNDC3AQ59EK9 Y_RNA.380-201ENST00000365663 111 ntBASIC2.17□□□□□ -2.06
RUNDC3AQ59EK9 Y_RNA.439-201ENST00000384119 94 ntBASIC2.17□□□□□ -2.06
RUNDC3AQ59EK9 MIR524-201ENST00000385242 87 ntBASIC2.17□□□□□ -2.06
RUNDC3AQ59EK9 SNORD23.1-201ENST00000408212 104 ntBASIC2.17□□□□□ -2.06
RUNDC3AQ59EK9 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
RUNDC3AQ59EK9 HMGN2P3-201ENST00000433603 273 ntBASIC2.17□□□□□ -2.06
RUNDC3AQ59EK9 HMGN2P5-201ENST00000436882 273 ntBASIC2.17□□□□□ -2.06
RUNDC3AQ59EK9 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.17□□□□□ -2.06
RUNDC3AQ59EK9 AL353689.1-201ENST00000438895 199 ntBASIC2.17□□□□□ -2.06
RUNDC3AQ59EK9 RNA5SP148-201ENST00000516527 94 ntBASIC2.17□□□□□ -2.06
RUNDC3AQ59EK9 AP005660.1-201ENST00000522972 293 ntBASIC2.17□□□□□ -2.06
RUNDC3AQ59EK9 MIR4423-201ENST00000580922 80 ntBASIC2.17□□□□□ -2.06
RUNDC3AQ59EK9 MIR5007-201ENST00000583098 95 ntBASIC2.17□□□□□ -2.06
RUNDC3AQ59EK9 AC012640.5-201ENST00000623897 319 ntBASIC2.17□□□□□ -2.06
RUNDC3AQ59EK9 AC091932.3-201ENST00000624223 323 ntBASIC2.17□□□□□ -2.06
RUNDC3AQ59EK9 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
RUNDC3AQ59EK9 RNU6-738P-201ENST00000384531 106 ntBASIC2.16□□□□□ -2.06
RUNDC3AQ59EK9 RNA5SP465-201ENST00000391195 109 ntBASIC2.16□□□□□ -2.06
RUNDC3AQ59EK9 RNA5SP450-201ENST00000411206 102 ntBASIC2.16□□□□□ -2.06
RUNDC3AQ59EK9 AC018634.1-201ENST00000437554 401 ntBASIC2.16□□□□□ -2.06
RUNDC3AQ59EK9 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.16□□□□□ -2.06
RUNDC3AQ59EK9 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.16□□□□□ -2.06
RUNDC3AQ59EK9 AC010655.3-201ENST00000478818 450 ntBASIC2.16□□□□□ -2.06
RUNDC3AQ59EK9 RNU6-966P-201ENST00000516479 104 ntBASIC2.16□□□□□ -2.06
RUNDC3AQ59EK9 AC131281.1-201ENST00000522984 164 ntBASIC2.16□□□□□ -2.06
RUNDC3AQ59EK9 AC021269.2-201ENST00000532318 330 ntBASIC2.16□□□□□ -2.06
RUNDC3AQ59EK9 AC005176.2-201ENST00000596933 147 ntBASIC2.16□□□□□ -2.06
RUNDC3AQ59EK9 AL355297.3-201ENST00000604082 446 ntBASIC2.16□□□□□ -2.06
RUNDC3AQ59EK9 AC046143.2-201ENST00000609789 160 ntBASIC2.16□□□□□ -2.06
RUNDC3AQ59EK9 U2.15-201ENST00000611544 191 ntBASIC2.16□□□□□ -2.06
RUNDC3AQ59EK9 U2.16-201ENST00000613119 191 ntBASIC2.16□□□□□ -2.06
RUNDC3AQ59EK9 U2.12-201ENST00000613778 191 ntBASIC2.16□□□□□ -2.06
RUNDC3AQ59EK9 U2.20-201ENST00000613956 192 ntBASIC2.16□□□□□ -2.06
RUNDC3AQ59EK9 U2.9-201ENST00000615427 191 ntBASIC2.16□□□□□ -2.06
RUNDC3AQ59EK9 MIR6817-201ENST00000615588 66 ntBASIC2.16□□□□□ -2.06
RUNDC3AQ59EK9 AC004467.1-201ENST00000615678 330 ntBASIC2.16□□□□□ -2.06
RUNDC3AQ59EK9 U2.11-201ENST00000616345 191 ntBASIC2.16□□□□□ -2.06
RUNDC3AQ59EK9 U2.2-201ENST00000616535 191 ntBASIC2.16□□□□□ -2.06
RUNDC3AQ59EK9 U2.3-201ENST00000617785 191 ntBASIC2.16□□□□□ -2.06
RUNDC3AQ59EK9 U2.19-201ENST00000618602 191 ntBASIC2.16□□□□□ -2.06
RUNDC3AQ59EK9 RNU2-1-201ENST00000618664 191 ntBASIC2.16□□□□□ -2.06
RUNDC3AQ59EK9 U2.6-201ENST00000619225 191 ntBASIC2.16□□□□□ -2.06
RUNDC3AQ59EK9 U2.5-201ENST00000619465 191 ntBASIC2.16□□□□□ -2.06
RUNDC3AQ59EK9 U2.10-201ENST00000620268 191 ntBASIC2.16□□□□□ -2.06
RUNDC3AQ59EK9 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
RUNDC3AQ59EK9 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
RUNDC3AQ59EK9 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.06
RUNDC3AQ59EK9 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
RUNDC3AQ59EK9 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
RUNDC3AQ59EK9 Y_RNA.101-201ENST00000363154 102 ntBASIC2.15□□□□□ -2.07
RUNDC3AQ59EK9 SNORA16B-201ENST00000364674 135 ntBASIC2.15□□□□□ -2.07
RUNDC3AQ59EK9 Y_RNA.570-201ENST00000384750 101 ntBASIC2.15□□□□□ -2.07
RUNDC3AQ59EK9 RNU11-3P-201ENST00000391111 133 ntBASIC2.15□□□□□ -2.07
RUNDC3AQ59EK9 RNA5SP475-201ENST00000410568 110 ntBASIC2.15□□□□□ -2.07
RUNDC3AQ59EK9 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.07
RUNDC3AQ59EK9 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.15□□□□□ -2.07
RUNDC3AQ59EK9 SNORA59A-201ENST00000459326 152 ntBASIC2.15□□□□□ -2.07
RUNDC3AQ59EK9 AC055731.1-201ENST00000474387 401 ntBASIC2.15□□□□□ -2.07
RUNDC3AQ59EK9 UBE2DNL-203ENST00000474922 222 ntBASIC2.15□□□□□ -2.07
RUNDC3AQ59EK9 AC011406.1-201ENST00000512440 370 ntBASIC2.15□□□□□ -2.07
RUNDC3AQ59EK9 RNU6-1041P-201ENST00000516254 102 ntBASIC2.15□□□□□ -2.07
RUNDC3AQ59EK9 RNU6-1046P-201ENST00000516538 107 ntBASIC2.15□□□□□ -2.07
RUNDC3AQ59EK9 RNU6-897P-201ENST00000517135 105 ntBASIC2.15□□□□□ -2.07
RUNDC3AQ59EK9 RNU2-19P-201ENST00000517288 84 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms