Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SLC44A4Q53GD3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.74□□□□□ -1.97
SLC44A4Q53GD3 ZNF271P-202ENST00000465539 1970 ntBASIC2.74□□□□□ -1.97
SLC44A4Q53GD3 RNA5SP393-201ENST00000363423 117 ntBASIC2.74□□□□□ -1.97
SLC44A4Q53GD3 Y_RNA.200-201ENST00000364018 102 ntBASIC2.74□□□□□ -1.97
SLC44A4Q53GD3 RNY1-201ENST00000364228 113 ntBASIC2.74□□□□□ -1.97
SLC44A4Q53GD3 RNU1-138P-201ENST00000384093 164 ntBASIC2.74□□□□□ -1.97
SLC44A4Q53GD3 RNU6-1145P-201ENST00000384246 107 ntBASIC2.74□□□□□ -1.97
SLC44A4Q53GD3 AL033519.2-201ENST00000403958 392 ntBASIC2.74□□□□□ -1.97
SLC44A4Q53GD3 MIR1298-201ENST00000408783 112 ntBASIC2.74□□□□□ -1.97
SLC44A4Q53GD3 AL139156.1-201ENST00000412785 841 ntBASIC2.74□□□□□ -1.97
SLC44A4Q53GD3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.74□□□□□ -1.97
SLC44A4Q53GD3 Y_RNA.638-201ENST00000459374 113 ntBASIC2.74□□□□□ -1.97
SLC44A4Q53GD3 SEPT14P8-201ENST00000508026 178 ntBASIC2.74□□□□□ -1.97
SLC44A4Q53GD3 RNU6-1098P-201ENST00000516772 96 ntBASIC2.74□□□□□ -1.97
SLC44A4Q53GD3 RNU2-44P-201ENST00000516795 194 ntBASIC2.74□□□□□ -1.97
SLC44A4Q53GD3 RNU7-110P-201ENST00000516891 62 ntBASIC2.74□□□□□ -1.97
SLC44A4Q53GD3 MIR3616-201ENST00000584070 92 ntBASIC2.74□□□□□ -1.97
SLC44A4Q53GD3 AL355297.2-201ENST00000604792 129 ntBASIC2.74□□□□□ -1.97
SLC44A4Q53GD3 AL357075.2-201ENST00000614906 189 ntBASIC2.74□□□□□ -1.97
SLC44A4Q53GD3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.74□□□□□ -1.97
SLC44A4Q53GD3 U2.14-201ENST00000615943 113 ntBASIC2.74□□□□□ -1.97
SLC44A4Q53GD3 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.74□□□□□ -1.97
SLC44A4Q53GD3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SLC44A4Q53GD3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
SLC44A4Q53GD3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
SLC44A4Q53GD3 MIR26A1-201ENST00000362205 77 ntBASIC2.73□□□□□ -1.97
SLC44A4Q53GD3 Y_RNA.29-201ENST00000362570 113 ntBASIC2.73□□□□□ -1.97
SLC44A4Q53GD3 RNU6-743P-201ENST00000364151 106 ntBASIC2.73□□□□□ -1.97
SLC44A4Q53GD3 DEFA7P-201ENST00000382676 285 ntBASIC2.73□□□□□ -1.97
SLC44A4Q53GD3 MIR1294-201ENST00000408503 142 ntBASIC2.73□□□□□ -1.97
SLC44A4Q53GD3 RNU6-651P-201ENST00000411040 105 ntBASIC2.73□□□□□ -1.97
SLC44A4Q53GD3 RNU2-32P-201ENST00000411193 191 ntBASIC2.73□□□□□ -1.97
SLC44A4Q53GD3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.73□□□□□ -1.97
SLC44A4Q53GD3 AC003685.2-201ENST00000422795 395 ntBASIC2.73□□□□□ -1.97
SLC44A4Q53GD3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.73□□□□□ -1.97
SLC44A4Q53GD3 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.73□□□□□ -1.97
SLC44A4Q53GD3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.73□□□□□ -1.97
SLC44A4Q53GD3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.73□□□□□ -1.97
SLC44A4Q53GD3 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.73□□□□□ -1.97
SLC44A4Q53GD3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.73□□□□□ -1.97
SLC44A4Q53GD3 SNRPGP20-201ENST00000604477 205 ntBASIC2.73□□□□□ -1.97
SLC44A4Q53GD3 SNORD113-5-201ENST00000607261 78 ntBASIC2.73□□□□□ -1.97
SLC44A4Q53GD3 AC090115.4-201ENST00000609970 188 ntBASIC2.73□□□□□ -1.97
SLC44A4Q53GD3 AC010999.1-201ENST00000611856 324 ntBASIC2.73□□□□□ -1.97
SLC44A4Q53GD3 MIR1248-201ENST00000629190 106 ntBASIC2.73□□□□□ -1.97
SLC44A4Q53GD3 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.73□□□□□ -1.97
SLC44A4Q53GD3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.73□□□□□ -1.97
SLC44A4Q53GD3 AC131280.1-202ENST00000624067 4211 ntBASIC2.73□□□□□ -1.97
SLC44A4Q53GD3 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
SLC44A4Q53GD3 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.72□□□□□ -1.97
SLC44A4Q53GD3 RNU6-21P-201ENST00000384710 107 ntBASIC2.72□□□□□ -1.97
SLC44A4Q53GD3 MIR592-201ENST00000384959 97 ntBASIC2.72□□□□□ -1.97
SLC44A4Q53GD3 MIR95-201ENST00000385072 81 ntBASIC2.72□□□□□ -1.97
SLC44A4Q53GD3 RNU2-63P-201ENST00000410792 194 ntBASIC2.72□□□□□ -1.97
SLC44A4Q53GD3 RNU5A-5P-201ENST00000411054 116 ntBASIC2.72□□□□□ -1.97
SLC44A4Q53GD3 RNU4-61P-201ENST00000411243 107 ntBASIC2.72□□□□□ -1.97
SLC44A4Q53GD3 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.72□□□□□ -1.97
SLC44A4Q53GD3 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.72□□□□□ -1.97
SLC44A4Q53GD3 Z98742.3-201ENST00000418637 326 ntBASIC2.72□□□□□ -1.97
SLC44A4Q53GD3 RPL23AP3-201ENST00000453844 468 ntBASIC2.72□□□□□ -1.97
SLC44A4Q53GD3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.72□□□□□ -1.97
SLC44A4Q53GD3 SNORA40.9-201ENST00000515895 93 ntBASIC2.72□□□□□ -1.97
SLC44A4Q53GD3 AC109329.2-201ENST00000519658 482 ntBASIC2.72□□□□□ -1.97
SLC44A4Q53GD3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.72□□□□□ -1.97
SLC44A4Q53GD3 MIR4769-201ENST00000584126 77 ntBASIC2.72□□□□□ -1.97
SLC44A4Q53GD3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.72□□□□□ -1.97
SLC44A4Q53GD3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.72□□□□□ -1.97
SLC44A4Q53GD3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.72□□□□□ -1.97
SLC44A4Q53GD3 TCL6_2.1-201ENST00000615162 119 ntBASIC2.72□□□□□ -1.97
SLC44A4Q53GD3 FTX_2.1-201ENST00000618816 94 ntBASIC2.72□□□□□ -1.97
SLC44A4Q53GD3 AC127459.3-201ENST00000624328 466 ntBASIC2.72□□□□□ -1.97
SLC44A4Q53GD3 Y_RNA.44-201ENST00000362676 108 ntBASIC2.71□□□□□ -1.98
SLC44A4Q53GD3 Y_RNA.83-201ENST00000363005 113 ntBASIC2.71□□□□□ -1.98
SLC44A4Q53GD3 Y_RNA.179-201ENST00000363844 90 ntBASIC2.71□□□□□ -1.98
SLC44A4Q53GD3 Y_RNA.199-201ENST00000364014 102 ntBASIC2.71□□□□□ -1.98
SLC44A4Q53GD3 RNU6-1175P-201ENST00000365200 107 ntBASIC2.71□□□□□ -1.98
SLC44A4Q53GD3 Y_RNA.415-201ENST00000384012 112 ntBASIC2.71□□□□□ -1.98
SLC44A4Q53GD3 Y_RNA.569-201ENST00000384749 103 ntBASIC2.71□□□□□ -1.98
SLC44A4Q53GD3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
SLC44A4Q53GD3 CYP2C59P-201ENST00000457790 269 ntBASIC2.71□□□□□ -1.98
SLC44A4Q53GD3 ATP5EP1-201ENST00000510257 156 ntBASIC2.71□□□□□ -1.98
SLC44A4Q53GD3 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.71□□□□□ -1.98
SLC44A4Q53GD3 RNU5F-4P-201ENST00000516581 114 ntBASIC2.71□□□□□ -1.98
SLC44A4Q53GD3 Y_RNA.700-201ENST00000516806 100 ntBASIC2.71□□□□□ -1.98
SLC44A4Q53GD3 RNU2-31P-201ENST00000516954 155 ntBASIC2.71□□□□□ -1.98
SLC44A4Q53GD3 SNORA48.11-201ENST00000517015 89 ntBASIC2.71□□□□□ -1.98
SLC44A4Q53GD3 RNU1-117P-201ENST00000517041 158 ntBASIC2.71□□□□□ -1.98
SLC44A4Q53GD3 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.71□□□□□ -1.98
SLC44A4Q53GD3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
SLC44A4Q53GD3 AC055872.1-201ENST00000570978 278 ntBASIC2.71□□□□□ -1.98
SLC44A4Q53GD3 MIR4423-201ENST00000580922 80 ntBASIC2.71□□□□□ -1.98
SLC44A4Q53GD3 AC008749.1-201ENST00000597650 306 ntBASIC2.71□□□□□ -1.98
SLC44A4Q53GD3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.71□□□□□ -1.98
SLC44A4Q53GD3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
SLC44A4Q53GD3 MTND5P35-201ENST00000557537 1720 ntBASIC2.71□□□□□ -1.98
SLC44A4Q53GD3 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SLC44A4Q53GD3 RNU6-740P-201ENST00000364734 105 ntBASIC2.7□□□□□ -1.98
SLC44A4Q53GD3 RNU6-546P-201ENST00000383991 107 ntBASIC2.7□□□□□ -1.98
SLC44A4Q53GD3 RNU6-245P-201ENST00000384020 107 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 339.4 ms