Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 SNORD115-38-201ENST00000365037 82 ntBASIC0.65□□□□□ -2.31
ZNF404Q494X3 MIR100-201ENST00000385259 80 ntBASIC0.65□□□□□ -2.31
ZNF404Q494X3 SNORD41-201ENST00000386967 70 ntBASIC0.65□□□□□ -2.31
ZNF404Q494X3 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.65□□□□□ -2.31
ZNF404Q494X3 RNU4-55P-201ENST00000410731 137 ntBASIC0.65□□□□□ -2.31
ZNF404Q494X3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.65□□□□□ -2.31
ZNF404Q494X3 STAG3L5P-204ENST00000443759 179 ntBASIC0.65□□□□□ -2.31
ZNF404Q494X3 NDUFB4P10-201ENST00000452541 359 ntBASIC0.65□□□□□ -2.31
ZNF404Q494X3 RNU6-956P-201ENST00000458868 103 ntBASIC0.65□□□□□ -2.31
ZNF404Q494X3 AC091885.1-201ENST00000506658 268 ntBASIC0.65□□□□□ -2.31
ZNF404Q494X3 PDCD5P2-201ENST00000507570 312 ntBASIC0.65□□□□□ -2.31
ZNF404Q494X3 RN7SKP298-201ENST00000515950 94 ntBASIC0.65□□□□□ -2.31
ZNF404Q494X3 SNORA25.14-201ENST00000516481 132 ntBASIC0.65□□□□□ -2.31
ZNF404Q494X3 FRG2DP-202ENST00000566967 323 ntBASIC0.65□□□□□ -2.31
ZNF404Q494X3 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.65□□□□□ -2.31
ZNF404Q494X3 AL133215.3-201ENST00000609801 448 ntBASIC0.65□□□□□ -2.31
ZNF404Q494X3 AC017083.3-201ENST00000609955 700 ntBASIC0.65□□□□□ -2.31
ZNF404Q494X3 AC023510.2-201ENST00000622162 746 ntBASIC0.65□□□□□ -2.31
ZNF404Q494X3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.65□□□□□ -2.31
ZNF404Q494X3 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
ZNF404Q494X3 HSBP1P2-201ENST00000299671 229 ntBASIC0.64□□□□□ -2.31
ZNF404Q494X3 RNU6-199P-201ENST00000362954 107 ntBASIC0.64□□□□□ -2.31
ZNF404Q494X3 SNORD50.1-201ENST00000362987 71 ntBASIC0.64□□□□□ -2.31
ZNF404Q494X3 MIR32-201ENST00000384965 70 ntBASIC0.64□□□□□ -2.31
ZNF404Q494X3 MIR653-201ENST00000385279 96 ntBASIC0.64□□□□□ -2.31
ZNF404Q494X3 AL590002.1-201ENST00000406554 418 ntBASIC0.64□□□□□ -2.31
ZNF404Q494X3 RNU2-64P-201ENST00000411315 191 ntBASIC0.64□□□□□ -2.31
ZNF404Q494X3 AC006461.1-201ENST00000412637 326 ntBASIC0.64□□□□□ -2.31
ZNF404Q494X3 AC079354.2-201ENST00000453523 154 ntBASIC0.64□□□□□ -2.31
ZNF404Q494X3 RNU6-261P-201ENST00000459506 102 ntBASIC0.64□□□□□ -2.31
ZNF404Q494X3 RNU6-947P-201ENST00000516264 106 ntBASIC0.64□□□□□ -2.31
ZNF404Q494X3 RNU6-1198P-201ENST00000516904 67 ntBASIC0.64□□□□□ -2.31
ZNF404Q494X3 AL590705.4-201ENST00000532209 134 ntBASIC0.64□□□□□ -2.31
ZNF404Q494X3 CYP3A137P-201ENST00000562436 69 ntBASIC0.64□□□□□ -2.31
ZNF404Q494X3 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.64□□□□□ -2.31
ZNF404Q494X3 MIR151B-201ENST00000584249 96 ntBASIC0.64□□□□□ -2.31
ZNF404Q494X3 AC080078.2-201ENST00000603766 501 ntBASIC0.64□□□□□ -2.31
ZNF404Q494X3 SNORA28-201ENST00000606769 126 ntBASIC0.64□□□□□ -2.31
ZNF404Q494X3 AP001330.5-201ENST00000607176 411 ntBASIC0.64□□□□□ -2.31
ZNF404Q494X3 FAM157A-202ENST00000615155 405 ntBASIC0.64□□□□□ -2.31
ZNF404Q494X3 AC073534.2-201ENST00000620377 381 ntBASIC0.64□□□□□ -2.31
ZNF404Q494X3 Y_RNA.116-201ENST00000363292 103 ntBASIC0.63□□□□□ -2.31
ZNF404Q494X3 SNORD115-32-201ENST00000364079 82 ntBASIC0.63□□□□□ -2.31
ZNF404Q494X3 RNU4-9P-201ENST00000364951 139 ntBASIC0.63□□□□□ -2.31
ZNF404Q494X3 Y_RNA.319-201ENST00000365138 92 ntBASIC0.63□□□□□ -2.31
ZNF404Q494X3 Y_RNA.363-201ENST00000365529 113 ntBASIC0.63□□□□□ -2.31
ZNF404Q494X3 Y_RNA.415-201ENST00000384012 112 ntBASIC0.63□□□□□ -2.31
ZNF404Q494X3 MIR200A-201ENST00000384875 90 ntBASIC0.63□□□□□ -2.31
ZNF404Q494X3 AL451046.2-201ENST00000403074 277 ntBASIC0.63□□□□□ -2.31
ZNF404Q494X3 MIR548J-201ENST00000408833 112 ntBASIC0.63□□□□□ -2.31
ZNF404Q494X3 AC114482.1-201ENST00000418010 247 ntBASIC0.63□□□□□ -2.31
ZNF404Q494X3 AL606490.4-201ENST00000423117 127 ntBASIC0.63□□□□□ -2.31
ZNF404Q494X3 AL353572.1-201ENST00000442490 417 ntBASIC0.63□□□□□ -2.31
ZNF404Q494X3 AC083798.1-201ENST00000472671 131 ntBASIC0.63□□□□□ -2.31
ZNF404Q494X3 AC091133.4-201ENST00000511142 308 ntBASIC0.63□□□□□ -2.31
ZNF404Q494X3 PSMC1P5-201ENST00000512850 177 ntBASIC0.63□□□□□ -2.31
ZNF404Q494X3 RNU6-197P-201ENST00000516680 100 ntBASIC0.63□□□□□ -2.31
ZNF404Q494X3 RNU6-58P-201ENST00000517143 103 ntBASIC0.63□□□□□ -2.31
ZNF404Q494X3 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.63□□□□□ -2.31
ZNF404Q494X3 AC090049.2-201ENST00000550377 109 ntBASIC0.63□□□□□ -2.31
ZNF404Q494X3 AC026371.1-201ENST00000551867 419 ntBASIC0.63□□□□□ -2.31
ZNF404Q494X3 AL121579.1-201ENST00000555129 305 ntBASIC0.63□□□□□ -2.31
ZNF404Q494X3 AC068790.6-201ENST00000602558 258 ntBASIC0.63□□□□□ -2.31
ZNF404Q494X3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
ZNF404Q494X3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.63□□□□□ -2.31
ZNF404Q494X3 MTND4P12-201ENST00000498999 1377 ntBASIC0.62□□□□□ -2.31
ZNF404Q494X3 RNU6-727P-201ENST00000363592 107 ntBASIC0.62□□□□□ -2.31
ZNF404Q494X3 Y_RNA.167-201ENST00000363735 109 ntBASIC0.62□□□□□ -2.31
ZNF404Q494X3 SNORD113-7-201ENST00000363762 77 ntBASIC0.62□□□□□ -2.31
ZNF404Q494X3 RNU6-873P-201ENST00000363833 107 ntBASIC0.62□□□□□ -2.31
ZNF404Q494X3 SNORA69-201ENST00000383895 132 ntBASIC0.62□□□□□ -2.31
ZNF404Q494X3 RNU6-790P-201ENST00000384479 105 ntBASIC0.62□□□□□ -2.31
ZNF404Q494X3 SNORA80D-201ENST00000384488 135 ntBASIC0.62□□□□□ -2.31
ZNF404Q494X3 MIR153-2-201ENST00000385225 87 ntBASIC0.62□□□□□ -2.31
ZNF404Q494X3 AF228730.1-201ENST00000397972 663 ntBASIC0.62□□□□□ -2.31
ZNF404Q494X3 AL355796.1-201ENST00000406706 323 ntBASIC0.62□□□□□ -2.31
ZNF404Q494X3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.62□□□□□ -2.31
ZNF404Q494X3 MTCO1P20-201ENST00000425366 358 ntBASIC0.62□□□□□ -2.31
ZNF404Q494X3 Z82188.1-201ENST00000436709 154 ntBASIC0.62□□□□□ -2.31
ZNF404Q494X3 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.62□□□□□ -2.31
ZNF404Q494X3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.62□□□□□ -2.31
ZNF404Q494X3 MTND3P16-201ENST00000452205 344 ntBASIC0.62□□□□□ -2.31
ZNF404Q494X3 RPL39P39-201ENST00000455840 151 ntBASIC0.62□□□□□ -2.31
ZNF404Q494X3 RNU6-322P-201ENST00000516010 103 ntBASIC0.62□□□□□ -2.31
ZNF404Q494X3 AC090142.3-201ENST00000519012 385 ntBASIC0.62□□□□□ -2.31
ZNF404Q494X3 AC104383.1-201ENST00000530297 370 ntBASIC0.62□□□□□ -2.31
ZNF404Q494X3 APOOP3-201ENST00000536787 586 ntBASIC0.62□□□□□ -2.31
ZNF404Q494X3 AK6P2-201ENST00000549020 471 ntBASIC0.62□□□□□ -2.31
ZNF404Q494X3 AC004817.2-201ENST00000561794 651 ntBASIC0.62□□□□□ -2.31
ZNF404Q494X3 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.62□□□□□ -2.31
ZNF404Q494X3 MIR4438-201ENST00000585271 93 ntBASIC0.62□□□□□ -2.31
ZNF404Q494X3 AL078603.1-201ENST00000603824 313 ntBASIC0.62□□□□□ -2.31
ZNF404Q494X3 AC006504.8-201ENST00000621046 635 ntBASIC0.62□□□□□ -2.31
ZNF404Q494X3 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.62□□□□□ -2.31
ZNF404Q494X3 AC121333.1-201ENST00000567488 2709 ntBASIC0.62□□□□□ -2.31
ZNF404Q494X3 RNU6-1322P-201ENST00000364309 107 ntBASIC0.61□□□□□ -2.31
ZNF404Q494X3 MIR514A2-201ENST00000385131 88 ntBASIC0.61□□□□□ -2.31
ZNF404Q494X3 MIR514A3-201ENST00000385132 88 ntBASIC0.61□□□□□ -2.31
ZNF404Q494X3 MIR518E-201ENST00000385252 88 ntBASIC0.61□□□□□ -2.31
ZNF404Q494X3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 155.4 ms