Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 AC010531.2-201ENST00000465012 153 ntBASIC2.11□□□□□ -2.07
USP41Q3LFD5 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.11□□□□□ -2.07
USP41Q3LFD5 RNU6-107P-201ENST00000516643 102 ntBASIC2.11□□□□□ -2.07
USP41Q3LFD5 RNU4-77P-201ENST00000516692 156 ntBASIC2.11□□□□□ -2.07
USP41Q3LFD5 RNU6-1153P-201ENST00000516760 105 ntBASIC2.11□□□□□ -2.07
USP41Q3LFD5 RN7SKP295-201ENST00000517264 153 ntBASIC2.11□□□□□ -2.07
USP41Q3LFD5 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.11□□□□□ -2.07
USP41Q3LFD5 VN1R91P-201ENST00000594377 169 ntBASIC2.11□□□□□ -2.07
USP41Q3LFD5 AC022140.2-201ENST00000623500 188 ntBASIC2.11□□□□□ -2.07
USP41Q3LFD5 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.1□□□□□ -2.07
USP41Q3LFD5 Y_RNA.80-201ENST00000362996 102 ntBASIC2.1□□□□□ -2.07
USP41Q3LFD5 RNU6-926P-201ENST00000384075 107 ntBASIC2.1□□□□□ -2.07
USP41Q3LFD5 RNU6-1145P-201ENST00000384246 107 ntBASIC2.1□□□□□ -2.07
USP41Q3LFD5 Y_RNA.485-201ENST00000384395 102 ntBASIC2.1□□□□□ -2.07
USP41Q3LFD5 MIR29C-201ENST00000385231 88 ntBASIC2.1□□□□□ -2.07
USP41Q3LFD5 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
USP41Q3LFD5 SNORA40.19-201ENST00000390846 128 ntBASIC2.1□□□□□ -2.07
USP41Q3LFD5 SNORA40.18-201ENST00000391200 128 ntBASIC2.1□□□□□ -2.07
USP41Q3LFD5 HMGN2P39-201ENST00000398005 273 ntBASIC2.1□□□□□ -2.07
USP41Q3LFD5 AL354751.2-201ENST00000415471 210 ntBASIC2.1□□□□□ -2.07
USP41Q3LFD5 AL445685.2-201ENST00000422551 342 ntBASIC2.1□□□□□ -2.07
USP41Q3LFD5 BX510359.4-201ENST00000423750 193 ntBASIC2.1□□□□□ -2.07
USP41Q3LFD5 AC025033.1-201ENST00000463883 194 ntBASIC2.1□□□□□ -2.07
USP41Q3LFD5 RN7SKP49-201ENST00000516675 260 ntBASIC2.1□□□□□ -2.07
USP41Q3LFD5 AP005660.1-201ENST00000522972 293 ntBASIC2.1□□□□□ -2.07
USP41Q3LFD5 HSBP1P1-201ENST00000555205 166 ntBASIC2.1□□□□□ -2.07
USP41Q3LFD5 AC110588.1-201ENST00000559699 137 ntBASIC2.1□□□□□ -2.07
USP41Q3LFD5 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.1□□□□□ -2.07
USP41Q3LFD5 AL590240.4-201ENST00000616908 390 ntBASIC2.1□□□□□ -2.07
USP41Q3LFD5 AC008873.1-201ENST00000625051 138 ntBASIC2.1□□□□□ -2.07
USP41Q3LFD5 AC134503.1-201ENST00000633048 54 ntBASIC2.1□□□□□ -2.07
USP41Q3LFD5 AL606534.2-204ENST00000635008 178 ntBASIC2.1□□□□□ -2.07
USP41Q3LFD5 LINC02555-201ENST00000563933 1951 ntBASIC2.1□□□□□ -2.07
USP41Q3LFD5 MIR340-201ENST00000362125 95 ntBASIC2.09□□□□□ -2.07
USP41Q3LFD5 Y_RNA.128-201ENST00000363391 112 ntBASIC2.09□□□□□ -2.07
USP41Q3LFD5 SNORD114-6-201ENST00000364393 72 ntBASIC2.09□□□□□ -2.07
USP41Q3LFD5 MIR518A2-201ENST00000384966 87 ntBASIC2.09□□□□□ -2.07
USP41Q3LFD5 MIR548B-201ENST00000385247 97 ntBASIC2.09□□□□□ -2.07
USP41Q3LFD5 SNORD12B-201ENST00000410433 91 ntBASIC2.09□□□□□ -2.07
USP41Q3LFD5 CYCSP49-201ENST00000420810 319 ntBASIC2.09□□□□□ -2.07
USP41Q3LFD5 PMCHL1-202ENST00000423102 261 ntBASIC2.09□□□□□ -2.07
USP41Q3LFD5 AL160004.2-201ENST00000432935 350 ntBASIC2.09□□□□□ -2.07
USP41Q3LFD5 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.09□□□□□ -2.07
USP41Q3LFD5 MTCO1P44-201ENST00000441935 243 ntBASIC2.09□□□□□ -2.07
USP41Q3LFD5 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.09□□□□□ -2.07
USP41Q3LFD5 RNU7-57P-201ENST00000459540 60 ntBASIC2.09□□□□□ -2.07
USP41Q3LFD5 RPS27P21-201ENST00000486977 252 ntBASIC2.09□□□□□ -2.07
USP41Q3LFD5 RNU6-948P-201ENST00000516374 107 ntBASIC2.09□□□□□ -2.07
USP41Q3LFD5 AL442163.3-201ENST00000554110 156 ntBASIC2.09□□□□□ -2.07
USP41Q3LFD5 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.09□□□□□ -2.07
USP41Q3LFD5 MIR4529-201ENST00000578110 78 ntBASIC2.09□□□□□ -2.07
USP41Q3LFD5 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.09□□□□□ -2.07
USP41Q3LFD5 MIR5089-201ENST00000580047 84 ntBASIC2.09□□□□□ -2.07
USP41Q3LFD5 MIR3935-201ENST00000583472 104 ntBASIC2.09□□□□□ -2.07
USP41Q3LFD5 AC078899.2-201ENST00000595282 212 ntBASIC2.09□□□□□ -2.07
USP41Q3LFD5 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.09□□□□□ -2.07
USP41Q3LFD5 AL357075.2-201ENST00000614906 189 ntBASIC2.09□□□□□ -2.07
USP41Q3LFD5 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
USP41Q3LFD5 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.08□□□□□ -2.08
USP41Q3LFD5 RNU6-23P-201ENST00000363283 107 ntBASIC2.08□□□□□ -2.08
USP41Q3LFD5 RNU6-708P-201ENST00000384217 107 ntBASIC2.08□□□□□ -2.08
USP41Q3LFD5 RNU6-975P-201ENST00000384296 105 ntBASIC2.08□□□□□ -2.08
USP41Q3LFD5 MIR548P-201ENST00000408336 84 ntBASIC2.08□□□□□ -2.08
USP41Q3LFD5 RNU6-57P-201ENST00000411348 103 ntBASIC2.08□□□□□ -2.08
USP41Q3LFD5 MTCO3P19-201ENST00000415864 321 ntBASIC2.08□□□□□ -2.08
USP41Q3LFD5 MCFD2P1-201ENST00000417812 300 ntBASIC2.08□□□□□ -2.08
USP41Q3LFD5 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.08□□□□□ -2.08
USP41Q3LFD5 AL603825.1-201ENST00000438481 80 ntBASIC2.08□□□□□ -2.08
USP41Q3LFD5 MTND4P19-201ENST00000446659 478 ntBASIC2.08□□□□□ -2.08
USP41Q3LFD5 AL021397.1-201ENST00000451806 248 ntBASIC2.08□□□□□ -2.08
USP41Q3LFD5 RNU2-19P-201ENST00000517288 84 ntBASIC2.08□□□□□ -2.08
USP41Q3LFD5 CYCSP23-201ENST00000519781 313 ntBASIC2.08□□□□□ -2.08
USP41Q3LFD5 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.08□□□□□ -2.08
USP41Q3LFD5 AC087441.2-201ENST00000529141 262 ntBASIC2.08□□□□□ -2.08
USP41Q3LFD5 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
USP41Q3LFD5 AK6P2-201ENST00000549020 471 ntBASIC2.08□□□□□ -2.08
USP41Q3LFD5 MIR5188-201ENST00000583467 113 ntBASIC2.08□□□□□ -2.08
USP41Q3LFD5 SNORD58B-201ENST00000607313 66 ntBASIC2.08□□□□□ -2.08
USP41Q3LFD5 AC083806.3-201ENST00000614016 455 ntBASIC2.08□□□□□ -2.08
USP41Q3LFD5 uc_338.20-201ENST00000621563 178 ntBASIC2.08□□□□□ -2.08
USP41Q3LFD5 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.08□□□□□ -2.08
USP41Q3LFD5 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.07□□□□□ -2.08
USP41Q3LFD5 RNU1-58P-201ENST00000362413 163 ntBASIC2.07□□□□□ -2.08
USP41Q3LFD5 Y_RNA.28-201ENST00000362554 111 ntBASIC2.07□□□□□ -2.08
USP41Q3LFD5 U3.8-201ENST00000363675 217 ntBASIC2.07□□□□□ -2.08
USP41Q3LFD5 RNA5SP493-201ENST00000364115 91 ntBASIC2.07□□□□□ -2.08
USP41Q3LFD5 RNU11-3P-201ENST00000391111 133 ntBASIC2.07□□□□□ -2.08
USP41Q3LFD5 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.07□□□□□ -2.08
USP41Q3LFD5 MTND1P14-201ENST00000427400 950 ntBASIC2.07□□□□□ -2.08
USP41Q3LFD5 PCNPP5-201ENST00000452246 481 ntBASIC2.07□□□□□ -2.08
USP41Q3LFD5 AC055731.1-201ENST00000474387 401 ntBASIC2.07□□□□□ -2.08
USP41Q3LFD5 RNU6-911P-201ENST00000516523 104 ntBASIC2.07□□□□□ -2.08
USP41Q3LFD5 AC023442.1-201ENST00000531247 422 ntBASIC2.07□□□□□ -2.08
USP41Q3LFD5 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.07□□□□□ -2.08
USP41Q3LFD5 AC044792.1-201ENST00000593294 196 ntBASIC2.07□□□□□ -2.08
USP41Q3LFD5 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.07□□□□□ -2.08
USP41Q3LFD5 AL138825.1-201ENST00000618587 192 ntBASIC2.07□□□□□ -2.08
USP41Q3LFD5 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.07□□□□□ -2.08
USP41Q3LFD5 Y_RNA.216-201ENST00000364205 93 ntBASIC2.06□□□□□ -2.08
USP41Q3LFD5 RNY3P4-201ENST00000384428 101 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms