Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 RNU6-541P-201ENST00000384709 110 ntBASIC1.16□□□□□ -2.22
RFX4Q33E94 RNU6-331P-201ENST00000384724 107 ntBASIC1.16□□□□□ -2.22
RFX4Q33E94 MIR194-1-201ENST00000384892 85 ntBASIC1.16□□□□□ -2.22
RFX4Q33E94 RNA5SP213-201ENST00000391031 106 ntBASIC1.16□□□□□ -2.22
RFX4Q33E94 MIR548K-201ENST00000408406 116 ntBASIC1.16□□□□□ -2.22
RFX4Q33E94 MIR548F5-201ENST00000408421 86 ntBASIC1.16□□□□□ -2.22
RFX4Q33E94 MIR1267-201ENST00000408723 78 ntBASIC1.16□□□□□ -2.22
RFX4Q33E94 EBAG9P1-201ENST00000418955 543 ntBASIC1.16□□□□□ -2.22
RFX4Q33E94 EIF1P1-201ENST00000421436 341 ntBASIC1.16□□□□□ -2.22
RFX4Q33E94 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.16□□□□□ -2.22
RFX4Q33E94 HMGN1P13-201ENST00000505795 138 ntBASIC1.16□□□□□ -2.22
RFX4Q33E94 RNU7-175P-201ENST00000515915 61 ntBASIC1.16□□□□□ -2.22
RFX4Q33E94 RNU6-1198P-201ENST00000516904 67 ntBASIC1.16□□□□□ -2.22
RFX4Q33E94 AC134698.4-201ENST00000523451 826 ntBASIC1.16□□□□□ -2.22
RFX4Q33E94 AC090821.2-201ENST00000523552 176 ntBASIC1.16□□□□□ -2.22
RFX4Q33E94 FRG2DP-202ENST00000566967 323 ntBASIC1.16□□□□□ -2.22
RFX4Q33E94 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.16□□□□□ -2.22
RFX4Q33E94 AC060780.3-201ENST00000589464 80 ntBASIC1.16□□□□□ -2.22
RFX4Q33E94 AC018462.2-201ENST00000605375 395 ntBASIC1.16□□□□□ -2.22
RFX4Q33E94 AC005014.2-201ENST00000607795 599 ntBASIC1.16□□□□□ -2.22
RFX4Q33E94 AL512598.1-201ENST00000610158 273 ntBASIC1.16□□□□□ -2.22
RFX4Q33E94 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.16□□□□□ -2.22
RFX4Q33E94 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
RFX4Q33E94 AC027514.1-201ENST00000588561 1603 ntBASIC1.15□□□□□ -2.22
RFX4Q33E94 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
RFX4Q33E94 Y_RNA.339-201ENST00000365325 102 ntBASIC1.15□□□□□ -2.23
RFX4Q33E94 RNU6-793P-201ENST00000384233 104 ntBASIC1.15□□□□□ -2.23
RFX4Q33E94 RNA5SP109-201ENST00000391010 116 ntBASIC1.15□□□□□ -2.23
RFX4Q33E94 MIR1185-2-201ENST00000408687 86 ntBASIC1.15□□□□□ -2.23
RFX4Q33E94 FCF1P9-201ENST00000412546 282 ntBASIC1.15□□□□□ -2.23
RFX4Q33E94 AC005002.2-201ENST00000438228 269 ntBASIC1.15□□□□□ -2.23
RFX4Q33E94 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.15□□□□□ -2.23
RFX4Q33E94 RPS27P1-201ENST00000450552 247 ntBASIC1.15□□□□□ -2.23
RFX4Q33E94 RN7SKP210-201ENST00000459176 261 ntBASIC1.15□□□□□ -2.23
RFX4Q33E94 RPL36AP21-201ENST00000490372 323 ntBASIC1.15□□□□□ -2.23
RFX4Q33E94 AL163195.1-201ENST00000496941 348 ntBASIC1.15□□□□□ -2.23
RFX4Q33E94 Y_RNA.670-201ENST00000516255 105 ntBASIC1.15□□□□□ -2.23
RFX4Q33E94 RNU6-358P-201ENST00000516564 75 ntBASIC1.15□□□□□ -2.23
RFX4Q33E94 RNA5SP481-201ENST00000516814 122 ntBASIC1.15□□□□□ -2.23
RFX4Q33E94 RNU7-128P-201ENST00000517247 62 ntBASIC1.15□□□□□ -2.23
RFX4Q33E94 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.15□□□□□ -2.23
RFX4Q33E94 AC005668.1-201ENST00000571142 476 ntBASIC1.15□□□□□ -2.23
RFX4Q33E94 MIR5695-201ENST00000579717 85 ntBASIC1.15□□□□□ -2.23
RFX4Q33E94 BNIP3P10-201ENST00000605360 577 ntBASIC1.15□□□□□ -2.23
RFX4Q33E94 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.15□□□□□ -2.23
RFX4Q33E94 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.15□□□□□ -2.23
RFX4Q33E94 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.14□□□□□ -2.23
RFX4Q33E94 RNU6-874P-201ENST00000362390 105 ntBASIC1.14□□□□□ -2.23
RFX4Q33E94 U3.8-201ENST00000363675 217 ntBASIC1.14□□□□□ -2.23
RFX4Q33E94 RNA5SP99-201ENST00000364020 114 ntBASIC1.14□□□□□ -2.23
RFX4Q33E94 RNU6-1240P-201ENST00000365155 104 ntBASIC1.14□□□□□ -2.23
RFX4Q33E94 SNORA17.3-201ENST00000391159 129 ntBASIC1.14□□□□□ -2.23
RFX4Q33E94 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
RFX4Q33E94 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.14□□□□□ -2.23
RFX4Q33E94 MIR1285-1-201ENST00000408593 84 ntBASIC1.14□□□□□ -2.23
RFX4Q33E94 Y_RNA.594-201ENST00000410373 140 ntBASIC1.14□□□□□ -2.23
RFX4Q33E94 MTND3P8-201ENST00000412909 339 ntBASIC1.14□□□□□ -2.23
RFX4Q33E94 AL139396.1-201ENST00000421137 167 ntBASIC1.14□□□□□ -2.23
RFX4Q33E94 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.14□□□□□ -2.23
RFX4Q33E94 RPS3AP52-201ENST00000435639 297 ntBASIC1.14□□□□□ -2.23
RFX4Q33E94 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.14□□□□□ -2.23
RFX4Q33E94 NDUFB4P10-201ENST00000452541 359 ntBASIC1.14□□□□□ -2.23
RFX4Q33E94 RPS29P29-201ENST00000456396 171 ntBASIC1.14□□□□□ -2.23
RFX4Q33E94 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.14□□□□□ -2.23
RFX4Q33E94 snoU13.27-201ENST00000459278 104 ntBASIC1.14□□□□□ -2.23
RFX4Q33E94 RPS26P55-201ENST00000471178 356 ntBASIC1.14□□□□□ -2.23
RFX4Q33E94 AC093303.1-201ENST00000514549 295 ntBASIC1.14□□□□□ -2.23
RFX4Q33E94 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.14□□□□□ -2.23
RFX4Q33E94 MIR5701-3-201ENST00000578890 82 ntBASIC1.14□□□□□ -2.23
RFX4Q33E94 MIR5701-1-201ENST00000585138 82 ntBASIC1.14□□□□□ -2.23
RFX4Q33E94 AL050343.2-201ENST00000607338 280 ntBASIC1.14□□□□□ -2.23
RFX4Q33E94 MIR5701-2-201ENST00000615634 82 ntBASIC1.14□□□□□ -2.23
RFX4Q33E94 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.14□□□□□ -2.23
RFX4Q33E94 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.13□□□□□ -2.23
RFX4Q33E94 ICE2P2-201ENST00000483823 2787 ntBASIC1.13□□□□□ -2.23
RFX4Q33E94 Y_RNA.106-201ENST00000363189 100 ntBASIC1.13□□□□□ -2.23
RFX4Q33E94 Y_RNA.179-201ENST00000363844 90 ntBASIC1.13□□□□□ -2.23
RFX4Q33E94 RNU6-280P-201ENST00000364145 104 ntBASIC1.13□□□□□ -2.23
RFX4Q33E94 SNORD1A-201ENST00000364968 72 ntBASIC1.13□□□□□ -2.23
RFX4Q33E94 SNORA72.2-201ENST00000365028 127 ntBASIC1.13□□□□□ -2.23
RFX4Q33E94 RNU6-281P-201ENST00000384212 103 ntBASIC1.13□□□□□ -2.23
RFX4Q33E94 Y_RNA.490-201ENST00000384413 102 ntBASIC1.13□□□□□ -2.23
RFX4Q33E94 SNORA40.6-201ENST00000391153 128 ntBASIC1.13□□□□□ -2.23
RFX4Q33E94 RNU6-192P-201ENST00000391253 100 ntBASIC1.13□□□□□ -2.23
RFX4Q33E94 MIR1253-201ENST00000408273 105 ntBASIC1.13□□□□□ -2.23
RFX4Q33E94 AL591704.2-201ENST00000421658 181 ntBASIC1.13□□□□□ -2.23
RFX4Q33E94 RPS27P16-201ENST00000425758 201 ntBASIC1.13□□□□□ -2.23
RFX4Q33E94 FTH1P12-201ENST00000432137 551 ntBASIC1.13□□□□□ -2.23
RFX4Q33E94 AC069257.2-201ENST00000441819 155 ntBASIC1.13□□□□□ -2.23
RFX4Q33E94 RPS29P28-201ENST00000446439 141 ntBASIC1.13□□□□□ -2.23
RFX4Q33E94 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.13□□□□□ -2.23
RFX4Q33E94 FGF7P6-202ENST00000451282 293 ntBASIC1.13□□□□□ -2.23
RFX4Q33E94 AC004223.1-201ENST00000479840 271 ntBASIC1.13□□□□□ -2.23
RFX4Q33E94 AC018710.1-201ENST00000506509 158 ntBASIC1.13□□□□□ -2.23
RFX4Q33E94 AC103851.1-201ENST00000506833 274 ntBASIC1.13□□□□□ -2.23
RFX4Q33E94 RNU6-1146P-201ENST00000516282 102 ntBASIC1.13□□□□□ -2.23
RFX4Q33E94 RNU6-1016P-201ENST00000516689 94 ntBASIC1.13□□□□□ -2.23
RFX4Q33E94 AC091144.1-201ENST00000519573 138 ntBASIC1.13□□□□□ -2.23
RFX4Q33E94 DNAJC19P9-201ENST00000555084 351 ntBASIC1.13□□□□□ -2.23
RFX4Q33E94 AC015688.6-201ENST00000577737 104 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms