Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CTC1Q2NKJ3 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CTC1Q2NKJ3 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CTC1Q2NKJ3 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
CTC1Q2NKJ3 AF117829.1-206ENST00000621883 3802 ntBASIC4.17□□□□□ -1.74
CTC1Q2NKJ3 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CTC1Q2NKJ3 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CTC1Q2NKJ3 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.17□□□□□ -1.74
CTC1Q2NKJ3 Y_RNA.40-201ENST00000362645 93 ntBASIC4.17□□□□□ -1.74
CTC1Q2NKJ3 RNU6-529P-201ENST00000363383 104 ntBASIC4.17□□□□□ -1.74
CTC1Q2NKJ3 Y_RNA.190-201ENST00000363964 101 ntBASIC4.17□□□□□ -1.74
CTC1Q2NKJ3 RNU6-418P-201ENST00000384035 107 ntBASIC4.17□□□□□ -1.74
CTC1Q2NKJ3 SNORD116-22-201ENST00000384430 92 ntBASIC4.17□□□□□ -1.74
CTC1Q2NKJ3 RNU2-37P-201ENST00000410695 177 ntBASIC4.17□□□□□ -1.74
CTC1Q2NKJ3 AC018634.1-201ENST00000437554 401 ntBASIC4.17□□□□□ -1.74
CTC1Q2NKJ3 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.17□□□□□ -1.74
CTC1Q2NKJ3 RNA5SP310-201ENST00000459084 116 ntBASIC4.17□□□□□ -1.74
CTC1Q2NKJ3 PPIAP15-201ENST00000479662 484 ntBASIC4.17□□□□□ -1.74
CTC1Q2NKJ3 RNA5SP20-201ENST00000515976 84 ntBASIC4.17□□□□□ -1.74
CTC1Q2NKJ3 HSPE1P18-201ENST00000517602 280 ntBASIC4.17□□□□□ -1.74
CTC1Q2NKJ3 AC021739.1-201ENST00000559631 174 ntBASIC4.17□□□□□ -1.74
CTC1Q2NKJ3 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.17□□□□□ -1.74
CTC1Q2NKJ3 AL049781.1-201ENST00000623195 3585 ntBASIC4.17□□□□□ -1.74
CTC1Q2NKJ3 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CTC1Q2NKJ3 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CTC1Q2NKJ3 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CTC1Q2NKJ3 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
CTC1Q2NKJ3 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.16□□□□□ -1.74
CTC1Q2NKJ3 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.16□□□□□ -1.74
CTC1Q2NKJ3 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CTC1Q2NKJ3 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.16□□□□□ -1.74
CTC1Q2NKJ3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.16□□□□□ -1.74
CTC1Q2NKJ3 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CTC1Q2NKJ3 RNU1-72P-201ENST00000362976 153 ntBASIC4.16□□□□□ -1.74
CTC1Q2NKJ3 RNU1-133P-201ENST00000364867 167 ntBASIC4.16□□□□□ -1.74
CTC1Q2NKJ3 RNA5SP97-201ENST00000365006 84 ntBASIC4.16□□□□□ -1.74
CTC1Q2NKJ3 RNU6-690P-201ENST00000365242 106 ntBASIC4.16□□□□□ -1.74
CTC1Q2NKJ3 SNORD14D-201ENST00000384390 87 ntBASIC4.16□□□□□ -1.74
CTC1Q2NKJ3 RNA5SP354-201ENST00000391247 136 ntBASIC4.16□□□□□ -1.74
CTC1Q2NKJ3 HSPE1P26-201ENST00000405341 275 ntBASIC4.16□□□□□ -1.74
CTC1Q2NKJ3 SNORD65B-201ENST00000459126 73 ntBASIC4.16□□□□□ -1.74
CTC1Q2NKJ3 AC104619.4-201ENST00000510773 249 ntBASIC4.16□□□□□ -1.74
CTC1Q2NKJ3 RNU6-126P-201ENST00000516685 103 ntBASIC4.16□□□□□ -1.74
CTC1Q2NKJ3 RNU7-143P-201ENST00000516781 65 ntBASIC4.16□□□□□ -1.74
CTC1Q2NKJ3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.16□□□□□ -1.74
CTC1Q2NKJ3 MIR548Z-201ENST00000584743 97 ntBASIC4.16□□□□□ -1.74
CTC1Q2NKJ3 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.16□□□□□ -1.74
CTC1Q2NKJ3 FAM35CP-201ENST00000554755 2470 ntBASIC4.16□□□□□ -1.74
CTC1Q2NKJ3 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CTC1Q2NKJ3 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CTC1Q2NKJ3 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CTC1Q2NKJ3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.16□□□□□ -1.74
CTC1Q2NKJ3 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.15□□□□□ -1.74
CTC1Q2NKJ3 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
CTC1Q2NKJ3 AC017071.1-201ENST00000564407 2204 ntBASIC4.15□□□□□ -1.74
CTC1Q2NKJ3 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CTC1Q2NKJ3 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
CTC1Q2NKJ3 RNU6-1099P-201ENST00000363533 107 ntBASIC4.15□□□□□ -1.75
CTC1Q2NKJ3 SNORD61-201ENST00000384252 73 ntBASIC4.15□□□□□ -1.75
CTC1Q2NKJ3 RNU6-1104P-201ENST00000384723 104 ntBASIC4.15□□□□□ -1.75
CTC1Q2NKJ3 AL031121.1-201ENST00000406553 254 ntBASIC4.15□□□□□ -1.75
CTC1Q2NKJ3 BTF3P4-201ENST00000418852 495 ntBASIC4.15□□□□□ -1.75
CTC1Q2NKJ3 AC109329.2-201ENST00000519658 482 ntBASIC4.15□□□□□ -1.75
CTC1Q2NKJ3 AC022523.2-201ENST00000561045 150 ntBASIC4.15□□□□□ -1.75
CTC1Q2NKJ3 MIR5187-201ENST00000583479 76 ntBASIC4.15□□□□□ -1.75
CTC1Q2NKJ3 MIR6076-201ENST00000617521 113 ntBASIC4.15□□□□□ -1.75
CTC1Q2NKJ3 MIR7702-201ENST00000621931 59 ntBASIC4.15□□□□□ -1.75
CTC1Q2NKJ3 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CTC1Q2NKJ3 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
CTC1Q2NKJ3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CTC1Q2NKJ3 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.14□□□□□ -1.75
CTC1Q2NKJ3 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.14□□□□□ -1.75
CTC1Q2NKJ3 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.14□□□□□ -1.75
CTC1Q2NKJ3 RNA5SP399-201ENST00000364003 117 ntBASIC4.14□□□□□ -1.75
CTC1Q2NKJ3 RNU6-219P-201ENST00000364728 107 ntBASIC4.14□□□□□ -1.75
CTC1Q2NKJ3 Y_RNA.426-201ENST00000384068 113 ntBASIC4.14□□□□□ -1.75
CTC1Q2NKJ3 MIR586-201ENST00000385035 97 ntBASIC4.14□□□□□ -1.75
CTC1Q2NKJ3 AL138878.1-201ENST00000405131 347 ntBASIC4.14□□□□□ -1.75
CTC1Q2NKJ3 AC245102.2-201ENST00000448956 180 ntBASIC4.14□□□□□ -1.75
CTC1Q2NKJ3 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.14□□□□□ -1.75
CTC1Q2NKJ3 SNRPGP3-201ENST00000469405 227 ntBASIC4.14□□□□□ -1.75
CTC1Q2NKJ3 AC107934.2-201ENST00000518653 310 ntBASIC4.14□□□□□ -1.75
CTC1Q2NKJ3 AC110741.2-201ENST00000605278 268 ntBASIC4.14□□□□□ -1.75
CTC1Q2NKJ3 MIR486-1-201ENST00000612171 68 ntBASIC4.14□□□□□ -1.75
CTC1Q2NKJ3 MIR3651-201ENST00000630427 90 ntBASIC4.14□□□□□ -1.75
CTC1Q2NKJ3 AC007496.3-201ENST00000624987 3443 ntBASIC4.14□□□□□ -1.75
CTC1Q2NKJ3 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CTC1Q2NKJ3 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.14□□□□□ -1.75
CTC1Q2NKJ3 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.14□□□□□ -1.75
CTC1Q2NKJ3 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CTC1Q2NKJ3 RNU6-170P-201ENST00000362832 104 ntBASIC4.13□□□□□ -1.75
CTC1Q2NKJ3 SNORA33-201ENST00000363664 130 ntBASIC4.13□□□□□ -1.75
CTC1Q2NKJ3 Y_RNA.298-201ENST00000364960 107 ntBASIC4.13□□□□□ -1.75
CTC1Q2NKJ3 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CTC1Q2NKJ3 SNORD77.3-201ENST00000391113 65 ntBASIC4.13□□□□□ -1.75
CTC1Q2NKJ3 SNORA12-201ENST00000391162 147 ntBASIC4.13□□□□□ -1.75
CTC1Q2NKJ3 MIR1912-201ENST00000410389 80 ntBASIC4.13□□□□□ -1.75
CTC1Q2NKJ3 AL139247.1-201ENST00000422768 325 ntBASIC4.13□□□□□ -1.75
CTC1Q2NKJ3 AC004941.2-201ENST00000427009 228 ntBASIC4.13□□□□□ -1.75
CTC1Q2NKJ3 HMGN2P9-201ENST00000476875 229 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms