Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
CACNA1SQ13698 Y_RNA.201-201ENST00000364052 96 ntBASIC0.64□□□□□ -2.31
CACNA1SQ13698 RNU6-1329P-201ENST00000365664 107 ntBASIC0.64□□□□□ -2.31
CACNA1SQ13698 RNU6-877P-201ENST00000383868 107 ntBASIC0.64□□□□□ -2.31
CACNA1SQ13698 MIR562-201ENST00000384894 95 ntBASIC0.64□□□□□ -2.31
CACNA1SQ13698 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
CACNA1SQ13698 RNU6-910P-201ENST00000390844 107 ntBASIC0.64□□□□□ -2.31
CACNA1SQ13698 RNU2-66P-201ENST00000410650 161 ntBASIC0.64□□□□□ -2.31
CACNA1SQ13698 AL663109.1-201ENST00000411498 844 ntBASIC0.64□□□□□ -2.31
CACNA1SQ13698 AC004866.1-201ENST00000411748 78 ntBASIC0.64□□□□□ -2.31
CACNA1SQ13698 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.64□□□□□ -2.31
CACNA1SQ13698 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.64□□□□□ -2.31
CACNA1SQ13698 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.64□□□□□ -2.31
CACNA1SQ13698 MTCO3P8-201ENST00000453691 755 ntBASIC0.64□□□□□ -2.31
CACNA1SQ13698 MTCO2P18-201ENST00000457151 658 ntBASIC0.64□□□□□ -2.31
CACNA1SQ13698 AC090049.2-201ENST00000550377 109 ntBASIC0.64□□□□□ -2.31
CACNA1SQ13698 TPRKBP2-201ENST00000565969 475 ntBASIC0.64□□□□□ -2.31
CACNA1SQ13698 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.64□□□□□ -2.31
CACNA1SQ13698 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.64□□□□□ -2.31
CACNA1SQ13698 AC119751.7-201ENST00000600494 245 ntBASIC0.64□□□□□ -2.31
CACNA1SQ13698 AL359075.3-201ENST00000613288 217 ntBASIC0.64□□□□□ -2.31
CACNA1SQ13698 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.64□□□□□ -2.31
CACNA1SQ13698 MIR6863-201ENST00000636112 90 ntBASIC0.64□□□□□ -2.31
CACNA1SQ13698 ZNF204P-201ENST00000416749 2397 ntBASIC0.64□□□□□ -2.31
CACNA1SQ13698 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
CACNA1SQ13698 RNU4-21P-201ENST00000362802 126 ntBASIC0.63□□□□□ -2.31
CACNA1SQ13698 Y_RNA.151-201ENST00000363566 112 ntBASIC0.63□□□□□ -2.31
CACNA1SQ13698 RNY3P9-201ENST00000384727 106 ntBASIC0.63□□□□□ -2.31
CACNA1SQ13698 AL356776.1-201ENST00000406574 447 ntBASIC0.63□□□□□ -2.31
CACNA1SQ13698 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.63□□□□□ -2.31
CACNA1SQ13698 AL353572.1-201ENST00000442490 417 ntBASIC0.63□□□□□ -2.31
CACNA1SQ13698 AC016717.1-201ENST00000448918 286 ntBASIC0.63□□□□□ -2.31
CACNA1SQ13698 HSPE1P13-201ENST00000451143 297 ntBASIC0.63□□□□□ -2.31
CACNA1SQ13698 AC048334.1-201ENST00000477975 159 ntBASIC0.63□□□□□ -2.31
CACNA1SQ13698 RPL39P5-202ENST00000512505 151 ntBASIC0.63□□□□□ -2.31
CACNA1SQ13698 AC074133.1-201ENST00000515696 183 ntBASIC0.63□□□□□ -2.31
CACNA1SQ13698 SNORA25.14-201ENST00000516481 132 ntBASIC0.63□□□□□ -2.31
CACNA1SQ13698 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
CACNA1SQ13698 SUB1P2-201ENST00000556401 297 ntBASIC0.63□□□□□ -2.31
CACNA1SQ13698 AC026470.2-201ENST00000561492 181 ntBASIC0.63□□□□□ -2.31
CACNA1SQ13698 MIR4742-201ENST00000581069 85 ntBASIC0.63□□□□□ -2.31
CACNA1SQ13698 MIR4760-201ENST00000585040 80 ntBASIC0.63□□□□□ -2.31
CACNA1SQ13698 AC146944.4-201ENST00000602697 718 ntBASIC0.63□□□□□ -2.31
CACNA1SQ13698 AL929325.1-201ENST00000603096 117 ntBASIC0.63□□□□□ -2.31
CACNA1SQ13698 AL390123.1-201ENST00000603216 237 ntBASIC0.63□□□□□ -2.31
CACNA1SQ13698 7SK.7-201ENST00000603504 247 ntBASIC0.63□□□□□ -2.31
CACNA1SQ13698 RMST_3.1-201ENST00000611651 109 ntBASIC0.63□□□□□ -2.31
CACNA1SQ13698 uc_338.34-201ENST00000617467 174 ntBASIC0.63□□□□□ -2.31
CACNA1SQ13698 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.63□□□□□ -2.31
CACNA1SQ13698 U6.108-201ENST00000637764 58 ntBASIC0.63□□□□□ -2.31
CACNA1SQ13698 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.63□□□□□ -2.31
CACNA1SQ13698 Y_RNA.77-201ENST00000362962 107 ntBASIC0.63□□□□□ -2.31
CACNA1SQ13698 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC0.63□□□□□ -2.31
CACNA1SQ13698 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.63□□□□□ -2.31
CACNA1SQ13698 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.63□□□□□ -2.31
CACNA1SQ13698 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.63□□□□□ -2.31
CACNA1SQ13698 USP9YP29-201ENST00000445112 563 ntBASIC0.63□□□□□ -2.31
CACNA1SQ13698 AC073415.1-201ENST00000449240 153 ntBASIC0.63□□□□□ -2.31
CACNA1SQ13698 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.63□□□□□ -2.31
CACNA1SQ13698 AC145350.1-201ENST00000567426 208 ntBASIC0.63□□□□□ -2.31
CACNA1SQ13698 AC023932.2-201ENST00000603176 175 ntBASIC0.63□□□□□ -2.31
CACNA1SQ13698 AC009248.2-201ENST00000619826 254 ntBASIC0.63□□□□□ -2.31
CACNA1SQ13698 Y_RNA.458-201ENST00000384240 102 ntBASIC0.62□□□□□ -2.31
CACNA1SQ13698 RNU6-440P-201ENST00000390882 105 ntBASIC0.62□□□□□ -2.31
CACNA1SQ13698 RNU6-1186P-201ENST00000410429 97 ntBASIC0.62□□□□□ -2.31
CACNA1SQ13698 RNA5SP494-201ENST00000410653 129 ntBASIC0.62□□□□□ -2.31
CACNA1SQ13698 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.62□□□□□ -2.31
CACNA1SQ13698 AC245047.3-201ENST00000429428 127 ntBASIC0.62□□□□□ -2.31
CACNA1SQ13698 HMGN2P34-201ENST00000437647 269 ntBASIC0.62□□□□□ -2.31
CACNA1SQ13698 AC105758.1-201ENST00000506038 399 ntBASIC0.62□□□□□ -2.31
CACNA1SQ13698 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
CACNA1SQ13698 RNU6-612P-201ENST00000516909 102 ntBASIC0.62□□□□□ -2.31
CACNA1SQ13698 AC007834.2-201ENST00000536310 343 ntBASIC0.62□□□□□ -2.31
CACNA1SQ13698 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.62□□□□□ -2.31
CACNA1SQ13698 AC068790.6-201ENST00000602558 258 ntBASIC0.62□□□□□ -2.31
CACNA1SQ13698 AC022217.4-201ENST00000604389 163 ntBASIC0.62□□□□□ -2.31
CACNA1SQ13698 AC068137.3-201ENST00000639191 341 ntBASIC0.62□□□□□ -2.31
CACNA1SQ13698 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
CACNA1SQ13698 RNU6-833P-201ENST00000363486 107 ntBASIC0.61□□□□□ -2.31
CACNA1SQ13698 Y_RNA.378-201ENST00000365652 113 ntBASIC0.61□□□□□ -2.31
CACNA1SQ13698 RNU6-325P-201ENST00000411132 105 ntBASIC0.61□□□□□ -2.31
CACNA1SQ13698 RNU2-64P-201ENST00000411315 191 ntBASIC0.61□□□□□ -2.31
CACNA1SQ13698 AL606490.4-201ENST00000423117 127 ntBASIC0.61□□□□□ -2.31
CACNA1SQ13698 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.61□□□□□ -2.31
CACNA1SQ13698 AL359672.1-201ENST00000442302 409 ntBASIC0.61□□□□□ -2.31
CACNA1SQ13698 RNU6-1208P-201ENST00000459588 107 ntBASIC0.61□□□□□ -2.31
CACNA1SQ13698 AC091874.1-201ENST00000511402 339 ntBASIC0.61□□□□□ -2.31
CACNA1SQ13698 RNU11-2P-201ENST00000516898 142 ntBASIC0.61□□□□□ -2.31
CACNA1SQ13698 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.61□□□□□ -2.31
CACNA1SQ13698 AC004817.2-201ENST00000561794 651 ntBASIC0.61□□□□□ -2.31
CACNA1SQ13698 AL162413.1-201ENST00000603198 110 ntBASIC0.61□□□□□ -2.31
CACNA1SQ13698 AL158063.1-201ENST00000615349 536 ntBASIC0.61□□□□□ -2.31
CACNA1SQ13698 AL513423.1-201ENST00000621695 132 ntBASIC0.61□□□□□ -2.31
CACNA1SQ13698 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.61□□□□□ -2.31
CACNA1SQ13698 SNORD114-7-201ENST00000362520 77 ntBASIC0.61□□□□□ -2.31
CACNA1SQ13698 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.61□□□□□ -2.31
CACNA1SQ13698 AL590002.1-201ENST00000406554 418 ntBASIC0.61□□□□□ -2.31
CACNA1SQ13698 C1DP4-201ENST00000455429 424 ntBASIC0.61□□□□□ -2.31
CACNA1SQ13698 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.61□□□□□ -2.31
CACNA1SQ13698 RNU7-180P-201ENST00000459240 63 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms