Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 MIR153-2-201ENST00000385225 87 ntBASIC0.65□□□□□ -2.31
FOXF1Q12946 RNA5SP323-201ENST00000391094 133 ntBASIC0.65□□□□□ -2.31
FOXF1Q12946 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.65□□□□□ -2.31
FOXF1Q12946 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.65□□□□□ -2.31
FOXF1Q12946 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.65□□□□□ -2.31
FOXF1Q12946 AC117454.1-201ENST00000491120 168 ntBASIC0.65□□□□□ -2.31
FOXF1Q12946 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.65□□□□□ -2.31
FOXF1Q12946 RNU7-99P-201ENST00000516271 62 ntBASIC0.65□□□□□ -2.31
FOXF1Q12946 SNORA31.10-201ENST00000516482 106 ntBASIC0.65□□□□□ -2.31
FOXF1Q12946 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.65□□□□□ -2.31
FOXF1Q12946 CYP3A137P-201ENST00000562436 69 ntBASIC0.65□□□□□ -2.31
FOXF1Q12946 AC006362.1-201ENST00000567392 174 ntBASIC0.65□□□□□ -2.31
FOXF1Q12946 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.65□□□□□ -2.31
FOXF1Q12946 MIR4661-201ENST00000582720 75 ntBASIC0.65□□□□□ -2.31
FOXF1Q12946 PIGPP4-201ENST00000584447 307 ntBASIC0.65□□□□□ -2.31
FOXF1Q12946 AL929325.1-201ENST00000603096 117 ntBASIC0.65□□□□□ -2.31
FOXF1Q12946 AL513534.2-201ENST00000603836 250 ntBASIC0.65□□□□□ -2.31
FOXF1Q12946 AC022217.4-201ENST00000604389 163 ntBASIC0.65□□□□□ -2.31
FOXF1Q12946 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.65□□□□□ -2.31
FOXF1Q12946 AC124864.2-201ENST00000624736 186 ntBASIC0.65□□□□□ -2.31
FOXF1Q12946 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
FOXF1Q12946 Y_RNA.135-201ENST00000363439 95 ntBASIC0.64□□□□□ -2.31
FOXF1Q12946 Y_RNA.359-201ENST00000365498 102 ntBASIC0.64□□□□□ -2.31
FOXF1Q12946 RNA5SP259-201ENST00000365541 109 ntBASIC0.64□□□□□ -2.31
FOXF1Q12946 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.64□□□□□ -2.31
FOXF1Q12946 RNU6-259P-201ENST00000383999 107 ntBASIC0.64□□□□□ -2.31
FOXF1Q12946 SNORD116-9-201ENST00000384000 95 ntBASIC0.64□□□□□ -2.31
FOXF1Q12946 SNORD116-3-201ENST00000384287 95 ntBASIC0.64□□□□□ -2.31
FOXF1Q12946 SNORD116-7-201ENST00000384404 95 ntBASIC0.64□□□□□ -2.31
FOXF1Q12946 SNORD116-5-201ENST00000384462 95 ntBASIC0.64□□□□□ -2.31
FOXF1Q12946 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
FOXF1Q12946 RNA5SP109-201ENST00000391010 116 ntBASIC0.64□□□□□ -2.31
FOXF1Q12946 RNA5SP467-201ENST00000391274 118 ntBASIC0.64□□□□□ -2.31
FOXF1Q12946 POLR2J4-204ENST00000418424 324 ntBASIC0.64□□□□□ -2.31
FOXF1Q12946 ZNF885P-201ENST00000420174 1098 ntBASIC0.64□□□□□ -2.31
FOXF1Q12946 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.64□□□□□ -2.31
FOXF1Q12946 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.64□□□□□ -2.31
FOXF1Q12946 RAB28P5-201ENST00000427490 651 ntBASIC0.64□□□□□ -2.31
FOXF1Q12946 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.64□□□□□ -2.31
FOXF1Q12946 AL606517.2-201ENST00000442855 241 ntBASIC0.64□□□□□ -2.31
FOXF1Q12946 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.64□□□□□ -2.31
FOXF1Q12946 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.64□□□□□ -2.31
FOXF1Q12946 MTCO2P30-201ENST00000503662 364 ntBASIC0.64□□□□□ -2.31
FOXF1Q12946 Y_RNA.688-201ENST00000516565 95 ntBASIC0.64□□□□□ -2.31
FOXF1Q12946 RNU6-1332P-201ENST00000516666 104 ntBASIC0.64□□□□□ -2.31
FOXF1Q12946 RNU6-58P-201ENST00000517143 103 ntBASIC0.64□□□□□ -2.31
FOXF1Q12946 CYCSP23-201ENST00000519781 313 ntBASIC0.64□□□□□ -2.31
FOXF1Q12946 AL137100.2-201ENST00000555786 315 ntBASIC0.64□□□□□ -2.31
FOXF1Q12946 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.64□□□□□ -2.31
FOXF1Q12946 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.64□□□□□ -2.31
FOXF1Q12946 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.64□□□□□ -2.31
FOXF1Q12946 RN7SKP299-201ENST00000606679 301 ntBASIC0.64□□□□□ -2.31
FOXF1Q12946 DISC2.1-201ENST00000612827 205 ntBASIC0.64□□□□□ -2.31
FOXF1Q12946 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.64□□□□□ -2.31
FOXF1Q12946 AC106800.4-201ENST00000614905 153 ntBASIC0.64□□□□□ -2.31
FOXF1Q12946 U6.73-201ENST00000619194 103 ntBASIC0.64□□□□□ -2.31
FOXF1Q12946 MIR8054-201ENST00000620877 86 ntBASIC0.64□□□□□ -2.31
FOXF1Q12946 MIR6863-201ENST00000636112 90 ntBASIC0.64□□□□□ -2.31
FOXF1Q12946 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.64□□□□□ -2.31
FOXF1Q12946 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
FOXF1Q12946 AC068700.1-201ENST00000565862 3754 ntBASIC0.63□□□□□ -2.31
FOXF1Q12946 Y_RNA.212-201ENST00000364177 102 ntBASIC0.63□□□□□ -2.31
FOXF1Q12946 Y_RNA.238-201ENST00000364441 102 ntBASIC0.63□□□□□ -2.31
FOXF1Q12946 Y_RNA.319-201ENST00000365138 92 ntBASIC0.63□□□□□ -2.31
FOXF1Q12946 RNU6-17P-201ENST00000384245 107 ntBASIC0.63□□□□□ -2.31
FOXF1Q12946 RNU6-18P-201ENST00000384527 107 ntBASIC0.63□□□□□ -2.31
FOXF1Q12946 MIR19B1-201ENST00000384829 87 ntBASIC0.63□□□□□ -2.31
FOXF1Q12946 MIR508-201ENST00000384857 115 ntBASIC0.63□□□□□ -2.31
FOXF1Q12946 SNORD12-201ENST00000391002 90 ntBASIC0.63□□□□□ -2.31
FOXF1Q12946 MRPL42P3-201ENST00000401492 326 ntBASIC0.63□□□□□ -2.31
FOXF1Q12946 AL034345.1-201ENST00000407768 123 ntBASIC0.63□□□□□ -2.31
FOXF1Q12946 RNU6-1054P-201ENST00000411293 104 ntBASIC0.63□□□□□ -2.31
FOXF1Q12946 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.63□□□□□ -2.31
FOXF1Q12946 AL353572.1-201ENST00000442490 417 ntBASIC0.63□□□□□ -2.31
FOXF1Q12946 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.63□□□□□ -2.31
FOXF1Q12946 Y_RNA.665-201ENST00000516177 98 ntBASIC0.63□□□□□ -2.31
FOXF1Q12946 RNU6-165P-201ENST00000517170 99 ntBASIC0.63□□□□□ -2.31
FOXF1Q12946 AC027288.2-201ENST00000553028 243 ntBASIC0.63□□□□□ -2.31
FOXF1Q12946 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.63□□□□□ -2.31
FOXF1Q12946 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.63□□□□□ -2.31
FOXF1Q12946 MIR4653-201ENST00000585107 83 ntBASIC0.63□□□□□ -2.31
FOXF1Q12946 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.63□□□□□ -2.31
FOXF1Q12946 AC010620.1-201ENST00000601088 1102 ntBASIC0.63□□□□□ -2.31
FOXF1Q12946 AL162413.1-201ENST00000603198 110 ntBASIC0.63□□□□□ -2.31
FOXF1Q12946 MIR6835-201ENST00000621552 64 ntBASIC0.63□□□□□ -2.31
FOXF1Q12946 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.63□□□□□ -2.31
FOXF1Q12946 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.63□□□□□ -2.31
FOXF1Q12946 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.63□□□□□ -2.31
FOXF1Q12946 MTND4P12-201ENST00000498999 1377 ntBASIC0.62□□□□□ -2.31
FOXF1Q12946 HSBP1P2-201ENST00000299671 229 ntBASIC0.62□□□□□ -2.31
FOXF1Q12946 RNU6-280P-201ENST00000364145 104 ntBASIC0.62□□□□□ -2.31
FOXF1Q12946 RNU6-596P-201ENST00000365395 98 ntBASIC0.62□□□□□ -2.31
FOXF1Q12946 Y_RNA.372-201ENST00000365599 102 ntBASIC0.62□□□□□ -2.31
FOXF1Q12946 Y_RNA.530-201ENST00000384587 101 ntBASIC0.62□□□□□ -2.31
FOXF1Q12946 MIR487A-201ENST00000385009 80 ntBASIC0.62□□□□□ -2.31
FOXF1Q12946 MIR653-201ENST00000385279 96 ntBASIC0.62□□□□□ -2.31
FOXF1Q12946 SNORA12.1-201ENST00000390873 148 ntBASIC0.62□□□□□ -2.31
FOXF1Q12946 RNU6-159P-201ENST00000391080 106 ntBASIC0.62□□□□□ -2.31
FOXF1Q12946 RNU6-908P-201ENST00000410160 94 ntBASIC0.62□□□□□ -2.31
FOXF1Q12946 RNU2-66P-201ENST00000410650 161 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms