Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 AC005332.6-201ENST00000613178 446 ntBASIC-1.73□□□□□ -2.69
TFF3Q07654 RNU6-223P-201ENST00000362830 107 ntBASIC-1.74□□□□□ -2.69
TFF3Q07654 RNU5E-10P-201ENST00000363506 118 ntBASIC-1.74□□□□□ -2.69
TFF3Q07654 RNU6-1078P-201ENST00000364522 103 ntBASIC-1.74□□□□□ -2.69
TFF3Q07654 Y_RNA.287-201ENST00000364853 94 ntBASIC-1.74□□□□□ -2.69
TFF3Q07654 MT-TY-201ENST00000387409 66 ntBASIC-1.74□□□□□ -2.69
TFF3Q07654 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.74□□□□□ -2.69
TFF3Q07654 RNY4P36-201ENST00000391116 96 ntBASIC-1.74□□□□□ -2.69
TFF3Q07654 MIR1185-2-201ENST00000408687 86 ntBASIC-1.74□□□□□ -2.69
TFF3Q07654 AC016831.2-201ENST00000417179 352 ntBASIC-1.74□□□□□ -2.69
TFF3Q07654 AC106883.1-201ENST00000418805 562 ntBASIC-1.74□□□□□ -2.69
TFF3Q07654 AC140658.3-201ENST00000567603 271 ntBASIC-1.74□□□□□ -2.69
TFF3Q07654 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-1.74□□□□□ -2.69
TFF3Q07654 AC134878.1-201ENST00000619901 243 ntBASIC-1.74□□□□□ -2.69
TFF3Q07654 MIR377-201ENST00000362145 69 ntBASIC-1.75□□□□□ -2.69
TFF3Q07654 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.75□□□□□ -2.69
TFF3Q07654 Y_RNA.533-201ENST00000384596 114 ntBASIC-1.75□□□□□ -2.69
TFF3Q07654 MIR526A1-201ENST00000384897 85 ntBASIC-1.75□□□□□ -2.69
TFF3Q07654 U8.16-201ENST00000391279 133 ntBASIC-1.75□□□□□ -2.69
TFF3Q07654 AL355143.1-201ENST00000407101 841 ntBASIC-1.75□□□□□ -2.69
TFF3Q07654 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC-1.75□□□□□ -2.69
TFF3Q07654 CALM2P4-201ENST00000430810 426 ntBASIC-1.75□□□□□ -2.69
TFF3Q07654 RNU1-142P-201ENST00000516682 145 ntBASIC-1.75□□□□□ -2.69
TFF3Q07654 RNU6-1098P-201ENST00000516772 96 ntBASIC-1.75□□□□□ -2.69
TFF3Q07654 MIR4752-201ENST00000579672 72 ntBASIC-1.75□□□□□ -2.69
TFF3Q07654 MIR5706-201ENST00000579841 80 ntBASIC-1.75□□□□□ -2.69
TFF3Q07654 AC138207.3-201ENST00000585289 166 ntBASIC-1.75□□□□□ -2.69
TFF3Q07654 AC008608.1-201ENST00000603910 127 ntBASIC-1.75□□□□□ -2.69
TFF3Q07654 SNORD115-42-201ENST00000364273 82 ntBASIC-1.76□□□□□ -2.69
TFF3Q07654 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.76□□□□□ -2.69
TFF3Q07654 Y_RNA.548-201ENST00000384656 105 ntBASIC-1.76□□□□□ -2.69
TFF3Q07654 MTND3P20-201ENST00000407663 186 ntBASIC-1.76□□□□□ -2.69
TFF3Q07654 RNU6-705P-201ENST00000410601 104 ntBASIC-1.76□□□□□ -2.69
TFF3Q07654 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-1.76□□□□□ -2.69
TFF3Q07654 AC113347.3-201ENST00000509113 148 ntBASIC-1.76□□□□□ -2.69
TFF3Q07654 RNU6-469P-201ENST00000516253 101 ntBASIC-1.76□□□□□ -2.69
TFF3Q07654 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.76□□□□□ -2.69
TFF3Q07654 MIR2115-201ENST00000516657 100 ntBASIC-1.76□□□□□ -2.69
TFF3Q07654 DEFB130C-202ENST00000530001 230 ntBASIC-1.76□□□□□ -2.69
TFF3Q07654 AL117336.2-201ENST00000602435 335 ntBASIC-1.76□□□□□ -2.69
TFF3Q07654 AC020891.4-201ENST00000605745 93 ntBASIC-1.76□□□□□ -2.69
TFF3Q07654 RNU6-428P-201ENST00000362942 107 ntBASIC-1.77□□□□□ -2.69
TFF3Q07654 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.77□□□□□ -2.69
TFF3Q07654 RNU6-417P-201ENST00000384712 107 ntBASIC-1.77□□□□□ -2.69
TFF3Q07654 SNORA26.5-201ENST00000391215 123 ntBASIC-1.77□□□□□ -2.69
TFF3Q07654 NDUFA5P7-201ENST00000452914 242 ntBASIC-1.77□□□□□ -2.69
TFF3Q07654 AL122001.1-201ENST00000457027 370 ntBASIC-1.77□□□□□ -2.69
TFF3Q07654 RPS29P27-201ENST00000463711 170 ntBASIC-1.77□□□□□ -2.69
TFF3Q07654 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC-1.77□□□□□ -2.69
TFF3Q07654 SNORA31.3-201ENST00000516029 96 ntBASIC-1.77□□□□□ -2.69
TFF3Q07654 RPL17P51-201ENST00000605218 238 ntBASIC-1.77□□□□□ -2.69
TFF3Q07654 RNU6-1026P-201ENST00000384465 108 ntBASIC-1.78□□□□□ -2.69
TFF3Q07654 MTCYBP2-201ENST00000407745 171 ntBASIC-1.78□□□□□ -2.69
TFF3Q07654 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-1.78□□□□□ -2.69
TFF3Q07654 MTND1P4-201ENST00000435196 415 ntBASIC-1.78□□□□□ -2.69
TFF3Q07654 SNORA13-201ENST00000458790 133 ntBASIC-1.78□□□□□ -2.69
TFF3Q07654 AC022447.4-201ENST00000504053 364 ntBASIC-1.78□□□□□ -2.69
TFF3Q07654 AC107027.2-201ENST00000512197 115 ntBASIC-1.78□□□□□ -2.69
TFF3Q07654 RNU7-12P-201ENST00000516030 62 ntBASIC-1.78□□□□□ -2.69
TFF3Q07654 AC115990.1-201ENST00000526957 301 ntBASIC-1.78□□□□□ -2.69
TFF3Q07654 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-1.78□□□□□ -2.69
TFF3Q07654 AC092104.1-201ENST00000497346 1441 ntBASIC-1.78□□□□□ -2.69
TFF3Q07654 RNU4-56P-201ENST00000364700 142 ntBASIC-1.79□□□□□ -2.7
TFF3Q07654 Y_RNA.480-201ENST00000384364 102 ntBASIC-1.79□□□□□ -2.7
TFF3Q07654 SNORD116-20-201ENST00000384529 92 ntBASIC-1.79□□□□□ -2.7
TFF3Q07654 MIR204-201ENST00000385200 110 ntBASIC-1.79□□□□□ -2.7
TFF3Q07654 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-1.79□□□□□ -2.7
TFF3Q07654 SUMO1P3-201ENST00000439961 304 ntBASIC-1.79□□□□□ -2.7
TFF3Q07654 AC079382.1-201ENST00000493346 557 ntBASIC-1.79□□□□□ -2.7
TFF3Q07654 RNU5F-4P-201ENST00000516581 114 ntBASIC-1.79□□□□□ -2.7
TFF3Q07654 RNU4-18P-201ENST00000516751 149 ntBASIC-1.79□□□□□ -2.7
TFF3Q07654 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.8□□□□□ -2.7
TFF3Q07654 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-1.8□□□□□ -2.7
TFF3Q07654 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-1.8□□□□□ -2.7
TFF3Q07654 MTATP6P26-201ENST00000445926 662 ntBASIC-1.8□□□□□ -2.7
TFF3Q07654 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-1.8□□□□□ -2.7
TFF3Q07654 AC093809.1-201ENST00000509155 340 ntBASIC-1.8□□□□□ -2.7
TFF3Q07654 RNU6-448P-201ENST00000517052 107 ntBASIC-1.8□□□□□ -2.7
TFF3Q07654 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC-1.8□□□□□ -2.7
TFF3Q07654 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-1.8□□□□□ -2.7
TFF3Q07654 AC090615.1-201ENST00000577519 154 ntBASIC-1.8□□□□□ -2.7
TFF3Q07654 AC110760.3-201ENST00000598794 467 ntBASIC-1.8□□□□□ -2.7
TFF3Q07654 RNU6-502P-201ENST00000362419 108 ntBASIC-1.81□□□□□ -2.7
TFF3Q07654 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.81□□□□□ -2.7
TFF3Q07654 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.81□□□□□ -2.7
TFF3Q07654 RNU6-119P-201ENST00000364882 107 ntBASIC-1.81□□□□□ -2.7
TFF3Q07654 Y_RNA.311-201ENST00000365068 96 ntBASIC-1.81□□□□□ -2.7
TFF3Q07654 MIR520C-201ENST00000385005 87 ntBASIC-1.81□□□□□ -2.7
TFF3Q07654 MTND1P21-201ENST00000412991 285 ntBASIC-1.81□□□□□ -2.7
TFF3Q07654 MTCYBP39-201ENST00000437562 491 ntBASIC-1.81□□□□□ -2.7
TFF3Q07654 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-1.81□□□□□ -2.7
TFF3Q07654 SCARNA18B-201ENST00000458806 135 ntBASIC-1.81□□□□□ -2.7
TFF3Q07654 RNU7-102P-201ENST00000458948 62 ntBASIC-1.81□□□□□ -2.7
TFF3Q07654 RNU6-732P-201ENST00000516033 103 ntBASIC-1.81□□□□□ -2.7
TFF3Q07654 RNA5SP47-201ENST00000517230 109 ntBASIC-1.81□□□□□ -2.7
TFF3Q07654 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC-1.81□□□□□ -2.7
TFF3Q07654 MTND2P38-201ENST00000522536 667 ntBASIC-1.81□□□□□ -2.7
TFF3Q07654 AL020997.3-201ENST00000602843 359 ntBASIC-1.81□□□□□ -2.7
TFF3Q07654 AL354696.1-201ENST00000614652 497 ntBASIC-1.81□□□□□ -2.7
TFF3Q07654 AL162376.1-201ENST00000624117 175 ntBASIC-1.81□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms