Protein–RNA interactions for Protein: Q01064

PDE1B, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B, humanhuman

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1BQ01064 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.12□□□□□ -2.07
PDE1BQ01064 AC091144.1-201ENST00000519573 138 ntBASIC2.12□□□□□ -2.07
PDE1BQ01064 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.12□□□□□ -2.07
PDE1BQ01064 NDUFA5P6-201ENST00000542110 379 ntBASIC2.12□□□□□ -2.07
PDE1BQ01064 AC022202.1-201ENST00000613515 211 ntBASIC2.12□□□□□ -2.07
PDE1BQ01064 AC011476.5-201ENST00000615594 130 ntBASIC2.12□□□□□ -2.07
PDE1BQ01064 AL138825.1-201ENST00000618587 192 ntBASIC2.12□□□□□ -2.07
PDE1BQ01064 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.12□□□□□ -2.07
PDE1BQ01064 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.11□□□□□ -2.07
PDE1BQ01064 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
PDE1BQ01064 AC117470.1-201ENST00000381974 330 ntBASIC2.11□□□□□ -2.07
PDE1BQ01064 RNU6-926P-201ENST00000384075 107 ntBASIC2.11□□□□□ -2.07
PDE1BQ01064 Y_RNA.458-201ENST00000384240 102 ntBASIC2.11□□□□□ -2.07
PDE1BQ01064 ELOCP21-201ENST00000412558 336 ntBASIC2.11□□□□□ -2.07
PDE1BQ01064 PCNPP5-201ENST00000452246 481 ntBASIC2.11□□□□□ -2.07
PDE1BQ01064 U8.20-201ENST00000459445 131 ntBASIC2.11□□□□□ -2.07
PDE1BQ01064 Y_RNA.683-201ENST00000516508 93 ntBASIC2.11□□□□□ -2.07
PDE1BQ01064 AC034114.1-201ENST00000520293 285 ntBASIC2.11□□□□□ -2.07
PDE1BQ01064 AC233702.2-202ENST00000562547 291 ntBASIC2.11□□□□□ -2.07
PDE1BQ01064 AC006504.6-201ENST00000590142 199 ntBASIC2.11□□□□□ -2.07
PDE1BQ01064 AC124312.5-201ENST00000604451 268 ntBASIC2.11□□□□□ -2.07
PDE1BQ01064 AL021879.1-201ENST00000611756 288 ntBASIC2.11□□□□□ -2.07
PDE1BQ01064 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.11□□□□□ -2.07
PDE1BQ01064 MIR219B-201ENST00000637023 88 ntBASIC2.11□□□□□ -2.07
PDE1BQ01064 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
PDE1BQ01064 AC092881.1-201ENST00000638218 2733 ntBASIC2.11□□□□□ -2.07
PDE1BQ01064 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.1□□□□□ -2.07
PDE1BQ01064 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.1□□□□□ -2.07
PDE1BQ01064 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
PDE1BQ01064 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.1□□□□□ -2.07
PDE1BQ01064 Y_RNA.162-201ENST00000363683 102 ntBASIC2.1□□□□□ -2.07
PDE1BQ01064 SNORD31B-201ENST00000364977 69 ntBASIC2.1□□□□□ -2.07
PDE1BQ01064 Y_RNA.455-201ENST00000384230 98 ntBASIC2.1□□□□□ -2.07
PDE1BQ01064 RNU6-130P-201ENST00000411112 103 ntBASIC2.1□□□□□ -2.07
PDE1BQ01064 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.1□□□□□ -2.07
PDE1BQ01064 RPL26P26-201ENST00000480251 434 ntBASIC2.1□□□□□ -2.07
PDE1BQ01064 AC093259.1-201ENST00000509755 300 ntBASIC2.1□□□□□ -2.07
PDE1BQ01064 SNORA4.4-201ENST00000515921 135 ntBASIC2.1□□□□□ -2.07
PDE1BQ01064 RNU6-991P-201ENST00000516168 107 ntBASIC2.1□□□□□ -2.07
PDE1BQ01064 RNU1-117P-201ENST00000517041 158 ntBASIC2.1□□□□□ -2.07
PDE1BQ01064 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.1□□□□□ -2.07
PDE1BQ01064 AC022616.4-201ENST00000522985 181 ntBASIC2.1□□□□□ -2.07
PDE1BQ01064 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.1□□□□□ -2.07
PDE1BQ01064 AC113195.1-201ENST00000579952 141 ntBASIC2.1□□□□□ -2.07
PDE1BQ01064 MIR4659A-201ENST00000580269 81 ntBASIC2.1□□□□□ -2.07
PDE1BQ01064 AC008749.1-201ENST00000597650 306 ntBASIC2.1□□□□□ -2.07
PDE1BQ01064 AL360085.1-201ENST00000604713 532 ntBASIC2.1□□□□□ -2.07
PDE1BQ01064 AC025754.2-201ENST00000606491 432 ntBASIC2.1□□□□□ -2.07
PDE1BQ01064 PART1_1.1-201ENST00000611761 217 ntBASIC2.1□□□□□ -2.07
PDE1BQ01064 AC240442.1-201ENST00000616055 283 ntBASIC2.1□□□□□ -2.07
PDE1BQ01064 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
PDE1BQ01064 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
PDE1BQ01064 SNORD114-1-201ENST00000362705 72 ntBASIC2.09□□□□□ -2.07
PDE1BQ01064 Y_RNA.153-201ENST00000363615 91 ntBASIC2.09□□□□□ -2.07
PDE1BQ01064 RNU5F-3P-201ENST00000363767 117 ntBASIC2.09□□□□□ -2.07
PDE1BQ01064 RNU6-961P-201ENST00000363893 105 ntBASIC2.09□□□□□ -2.07
PDE1BQ01064 MIR1262-201ENST00000408276 93 ntBASIC2.09□□□□□ -2.07
PDE1BQ01064 MIR1252-201ENST00000408861 65 ntBASIC2.09□□□□□ -2.07
PDE1BQ01064 RNU6-101P-201ENST00000410323 104 ntBASIC2.09□□□□□ -2.07
PDE1BQ01064 Y_RNA.595-201ENST00000410403 105 ntBASIC2.09□□□□□ -2.07
PDE1BQ01064 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.09□□□□□ -2.07
PDE1BQ01064 PRELID3BP1-201ENST00000457142 540 ntBASIC2.09□□□□□ -2.07
PDE1BQ01064 AC055731.1-201ENST00000474387 401 ntBASIC2.09□□□□□ -2.07
PDE1BQ01064 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.09□□□□□ -2.07
PDE1BQ01064 SNORA40.9-201ENST00000515895 93 ntBASIC2.09□□□□□ -2.07
PDE1BQ01064 RNU6-764P-201ENST00000516396 105 ntBASIC2.09□□□□□ -2.07
PDE1BQ01064 Y_RNA.715-201ENST00000517082 110 ntBASIC2.09□□□□□ -2.07
PDE1BQ01064 RNA5SP490-201ENST00000517141 136 ntBASIC2.09□□□□□ -2.07
PDE1BQ01064 Y_RNA.721-201ENST00000517207 102 ntBASIC2.09□□□□□ -2.07
PDE1BQ01064 SNORA31.25-201ENST00000517242 134 ntBASIC2.09□□□□□ -2.07
PDE1BQ01064 MIR3935-201ENST00000583472 104 ntBASIC2.09□□□□□ -2.07
PDE1BQ01064 RPS29P30-201ENST00000600975 111 ntBASIC2.09□□□□□ -2.07
PDE1BQ01064 SNORD11B-201ENST00000607707 90 ntBASIC2.09□□□□□ -2.07
PDE1BQ01064 AC010205.1-201ENST00000616668 449 ntBASIC2.09□□□□□ -2.07
PDE1BQ01064 AL078596.1-201ENST00000624856 447 ntBASIC2.09□□□□□ -2.07
PDE1BQ01064 AC068205.3-201ENST00000636385 468 ntBASIC2.09□□□□□ -2.07
PDE1BQ01064 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
PDE1BQ01064 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
PDE1BQ01064 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
PDE1BQ01064 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
PDE1BQ01064 MIR340-201ENST00000362125 95 ntBASIC2.08□□□□□ -2.08
PDE1BQ01064 RNU6-1305P-201ENST00000364353 104 ntBASIC2.08□□□□□ -2.08
PDE1BQ01064 Y_RNA.332-201ENST00000365271 113 ntBASIC2.08□□□□□ -2.08
PDE1BQ01064 Y_RNA.551-201ENST00000384661 102 ntBASIC2.08□□□□□ -2.08
PDE1BQ01064 MIR17-201ENST00000385012 84 ntBASIC2.08□□□□□ -2.08
PDE1BQ01064 MIR548B-201ENST00000385247 97 ntBASIC2.08□□□□□ -2.08
PDE1BQ01064 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
PDE1BQ01064 MIR1283-1-201ENST00000408494 87 ntBASIC2.08□□□□□ -2.08
PDE1BQ01064 MTND2P23-201ENST00000422990 651 ntBASIC2.08□□□□□ -2.08
PDE1BQ01064 RPEP5-201ENST00000441137 268 ntBASIC2.08□□□□□ -2.08
PDE1BQ01064 AC016925.1-201ENST00000458303 298 ntBASIC2.08□□□□□ -2.08
PDE1BQ01064 HMGN2P9-201ENST00000476875 229 ntBASIC2.08□□□□□ -2.08
PDE1BQ01064 RNU6-327P-201ENST00000516270 127 ntBASIC2.08□□□□□ -2.08
PDE1BQ01064 MIR4524B-201ENST00000581569 115 ntBASIC2.08□□□□□ -2.08
PDE1BQ01064 AC008737.2-201ENST00000599446 118 ntBASIC2.08□□□□□ -2.08
PDE1BQ01064 AC012493.3-201ENST00000604494 112 ntBASIC2.08□□□□□ -2.08
PDE1BQ01064 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.08□□□□□ -2.08
PDE1BQ01064 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.08□□□□□ -2.08
PDE1BQ01064 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
PDE1BQ01064 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms