Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC010975.2-201ENST00000427781 588 ntBASIC-0.28□□□□□ -2.45
HSPG2P98160 HMGN2P26-201ENST00000463169 339 ntBASIC-0.28□□□□□ -2.45
HSPG2P98160 AL163973.1-201ENST00000484753 577 ntBASIC-0.28□□□□□ -2.45
HSPG2P98160 RPL17P19-201ENST00000489069 552 ntBASIC-0.28□□□□□ -2.45
HSPG2P98160 MTCO3P9-201ENST00000506989 781 ntBASIC-0.28□□□□□ -2.45
HSPG2P98160 RNU7-43P-201ENST00000516554 64 ntBASIC-0.28□□□□□ -2.45
HSPG2P98160 Y_RNA.687-201ENST00000516558 91 ntBASIC-0.28□□□□□ -2.45
HSPG2P98160 AL359547.2-201ENST00000615810 418 ntBASIC-0.28□□□□□ -2.45
HSPG2P98160 RMST_10.1-201ENST00000616309 154 ntBASIC-0.28□□□□□ -2.45
HSPG2P98160 MIR499B-201ENST00000636498 73 ntBASIC-0.28□□□□□ -2.45
HSPG2P98160 RNU6-652P-201ENST00000365488 107 ntBASIC-0.28□□□□□ -2.45
HSPG2P98160 RNU6-378P-201ENST00000384324 107 ntBASIC-0.28□□□□□ -2.45
HSPG2P98160 RNU6-1207P-201ENST00000384343 107 ntBASIC-0.28□□□□□ -2.45
HSPG2P98160 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC-0.28□□□□□ -2.45
HSPG2P98160 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-0.28□□□□□ -2.45
HSPG2P98160 AL365184.2-201ENST00000431139 435 ntBASIC-0.28□□□□□ -2.45
HSPG2P98160 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-0.28□□□□□ -2.45
HSPG2P98160 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC-0.28□□□□□ -2.45
HSPG2P98160 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-0.28□□□□□ -2.45
HSPG2P98160 Z99289.3-201ENST00000605586 594 ntBASIC-0.28□□□□□ -2.45
HSPG2P98160 U6.108-201ENST00000637764 58 ntBASIC-0.28□□□□□ -2.45
HSPG2P98160 SNORA33-201ENST00000363664 130 ntBASIC-0.28□□□□□ -2.45
HSPG2P98160 AC083799.1-201ENST00000366451 910 ntBASIC-0.28□□□□□ -2.45
HSPG2P98160 RNU6-811P-201ENST00000384069 107 ntBASIC-0.28□□□□□ -2.45
HSPG2P98160 MIR496-201ENST00000385226 102 ntBASIC-0.28□□□□□ -2.45
HSPG2P98160 SNORA75.1-201ENST00000391130 148 ntBASIC-0.28□□□□□ -2.45
HSPG2P98160 MIR891A-201ENST00000401237 79 ntBASIC-0.28□□□□□ -2.45
HSPG2P98160 MRPL42P3-201ENST00000401492 326 ntBASIC-0.28□□□□□ -2.45
HSPG2P98160 RNU2-3P-201ENST00000410144 191 ntBASIC-0.28□□□□□ -2.45
HSPG2P98160 ELOCP21-201ENST00000412558 336 ntBASIC-0.28□□□□□ -2.45
HSPG2P98160 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC-0.28□□□□□ -2.45
HSPG2P98160 AL031274.1-201ENST00000450334 232 ntBASIC-0.28□□□□□ -2.45
HSPG2P98160 RNU6-448P-201ENST00000517052 107 ntBASIC-0.28□□□□□ -2.45
HSPG2P98160 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC-0.28□□□□□ -2.45
HSPG2P98160 MIR4778-201ENST00000577635 80 ntBASIC-0.28□□□□□ -2.45
HSPG2P98160 AC027279.3-201ENST00000625055 122 ntBASIC-0.28□□□□□ -2.45
HSPG2P98160 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 RNU5E-10P-201ENST00000363506 118 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 U8.16-201ENST00000391279 133 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC-0.29□□□□□ -2.46
HSPG2P98160 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.29□□□□□ -2.46
HSPG2P98160 MTCO3P27-201ENST00000514397 196 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 RNU4-49P-201ENST00000516080 140 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 AC022616.3-201ENST00000523940 148 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 DEFB131D-201ENST00000526803 184 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 MIR3152-201ENST00000579801 74 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 MIR4804-201ENST00000581683 73 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 MIR548AD-201ENST00000584780 82 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 Six3os1_7.1-201ENST00000621512 201 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 U4.7-201ENST00000638126 106 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 SNORD114-14-201ENST00000362723 75 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 RNU6-960P-201ENST00000364056 120 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 U8.5-201ENST00000364528 136 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 RNU6-343P-201ENST00000364709 104 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 SNORA2B-201ENST00000384583 137 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 RNU6-293P-201ENST00000411259 106 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 AC090960.1-201ENST00000421072 306 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 USP9YP11-201ENST00000427537 717 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 USP9YP29-201ENST00000445112 563 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.29□□□□□ -2.46
HSPG2P98160 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.29□□□□□ -2.46
HSPG2P98160 AC091885.1-201ENST00000506658 268 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.29□□□□□ -2.46
HSPG2P98160 RNU7-129P-201ENST00000516128 62 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 SNORA31.10-201ENST00000516482 106 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 AC023632.1-201ENST00000518463 375 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 AC021451.1-201ENST00000523498 1129 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 AC103996.1-201ENST00000555468 102 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC-0.29□□□□□ -2.46
HSPG2P98160 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-0.29□□□□□ -2.46
HSPG2P98160 SNORA59B-202ENST00000578183 701 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 Z99497.2-201ENST00000603634 310 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 AC104260.1-201ENST00000616660 539 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 AL450472.1-202ENST00000637286 180 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-0.29□□□□□ -2.46
HSPG2P98160 SNORA27.3-201ENST00000364937 134 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 RNU6-673P-201ENST00000365084 104 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 AL136310.1-201ENST00000404926 654 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 RPS3AP3-201ENST00000411933 242 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 AC015818.7-201ENST00000428754 109 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-0.29□□□□□ -2.46
HSPG2P98160 AC087499.7-201ENST00000441958 109 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 AC093850.1-201ENST00000454121 251 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 AC114755.3-201ENST00000481111 251 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 AC008628.2-201ENST00000502605 298 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 AC119751.4-201ENST00000507498 357 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 RNU7-12P-201ENST00000516030 62 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 FGF7P1-201ENST00000582820 288 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 AC091135.1-201ENST00000585943 307 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 AC010525.2-201ENST00000590920 195 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 AL138889.2-201ENST00000603883 242 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 SNORA28-201ENST00000606769 126 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 AC144521.1-201ENST00000607148 956 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 RNU6-480P-201ENST00000384332 107 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 RNU2-62P-201ENST00000410868 191 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-0.29□□□□□ -2.46
HSPG2P98160 POLR2KP2-201ENST00000438155 177 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-0.29□□□□□ -2.46
HSPG2P98160 AC079395.1-201ENST00000510981 262 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms