Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 SNORD113-7-201ENST00000363762 77 ntBASIC1.06□□□□□ -2.24
CCNA1P78396 RNU6-1305P-201ENST00000364353 104 ntBASIC1.06□□□□□ -2.24
CCNA1P78396 SNORA4.2-201ENST00000365313 147 ntBASIC1.06□□□□□ -2.24
CCNA1P78396 SNORD116-2-201ENST00000384274 95 ntBASIC1.06□□□□□ -2.24
CCNA1P78396 RNU6-975P-201ENST00000384296 105 ntBASIC1.06□□□□□ -2.24
CCNA1P78396 SNORD116-6-201ENST00000384711 96 ntBASIC1.06□□□□□ -2.24
CCNA1P78396 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
CCNA1P78396 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
CCNA1P78396 RNU11-5P-201ENST00000391216 129 ntBASIC1.06□□□□□ -2.24
CCNA1P78396 RNU2-16P-201ENST00000410712 136 ntBASIC1.06□□□□□ -2.24
CCNA1P78396 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.06□□□□□ -2.24
CCNA1P78396 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.06□□□□□ -2.24
CCNA1P78396 HMGN2P34-201ENST00000437647 269 ntBASIC1.06□□□□□ -2.24
CCNA1P78396 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.06□□□□□ -2.24
CCNA1P78396 HMGN1P12-201ENST00000499125 195 ntBASIC1.06□□□□□ -2.24
CCNA1P78396 AC107401.1-201ENST00000503426 685 ntBASIC1.06□□□□□ -2.24
CCNA1P78396 RNU6-1281P-201ENST00000516223 105 ntBASIC1.06□□□□□ -2.24
CCNA1P78396 AC026371.1-201ENST00000551867 419 ntBASIC1.06□□□□□ -2.24
CCNA1P78396 AL442163.3-201ENST00000554110 156 ntBASIC1.06□□□□□ -2.24
CCNA1P78396 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.06□□□□□ -2.24
CCNA1P78396 AC100830.2-201ENST00000581636 240 ntBASIC1.06□□□□□ -2.24
CCNA1P78396 MIR4661-201ENST00000582720 75 ntBASIC1.06□□□□□ -2.24
CCNA1P78396 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.06□□□□□ -2.24
CCNA1P78396 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.06□□□□□ -2.24
CCNA1P78396 AL133215.3-201ENST00000609801 448 ntBASIC1.06□□□□□ -2.24
CCNA1P78396 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.06□□□□□ -2.24
CCNA1P78396 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.06□□□□□ -2.24
CCNA1P78396 RNU6-784P-201ENST00000384330 106 ntBASIC1.05□□□□□ -2.24
CCNA1P78396 RNU6-790P-201ENST00000384479 105 ntBASIC1.05□□□□□ -2.24
CCNA1P78396 RNU6-57P-201ENST00000411348 103 ntBASIC1.05□□□□□ -2.24
CCNA1P78396 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.05□□□□□ -2.24
CCNA1P78396 DYNLT3P2-201ENST00000442517 295 ntBASIC1.05□□□□□ -2.24
CCNA1P78396 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.05□□□□□ -2.24
CCNA1P78396 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.05□□□□□ -2.24
CCNA1P78396 AC019235.1-201ENST00000503847 207 ntBASIC1.05□□□□□ -2.24
CCNA1P78396 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.05□□□□□ -2.24
CCNA1P78396 PIGPP4-201ENST00000584447 307 ntBASIC1.05□□□□□ -2.24
CCNA1P78396 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.05□□□□□ -2.24
CCNA1P78396 AC245008.1-201ENST00000608123 476 ntBASIC1.05□□□□□ -2.24
CCNA1P78396 AC092954.2-201ENST00000609103 430 ntBASIC1.05□□□□□ -2.24
CCNA1P78396 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.05□□□□□ -2.24
CCNA1P78396 MTND4P5-201ENST00000435821 1374 ntBASIC1.05□□□□□ -2.24
CCNA1P78396 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
CCNA1P78396 Y_RNA.373-201ENST00000365600 103 ntBASIC1.04□□□□□ -2.24
CCNA1P78396 SNORA22-201ENST00000383907 134 ntBASIC1.04□□□□□ -2.24
CCNA1P78396 RNU6-483P-201ENST00000384088 108 ntBASIC1.04□□□□□ -2.24
CCNA1P78396 SNORA22C-201ENST00000384614 134 ntBASIC1.04□□□□□ -2.24
CCNA1P78396 Y_RNA.559-201ENST00000384686 107 ntBASIC1.04□□□□□ -2.24
CCNA1P78396 RNU1-139P-201ENST00000391307 165 ntBASIC1.04□□□□□ -2.24
CCNA1P78396 Y_RNA.615-201ENST00000410769 117 ntBASIC1.04□□□□□ -2.24
CCNA1P78396 AL590632.1-201ENST00000424289 371 ntBASIC1.04□□□□□ -2.24
CCNA1P78396 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.04□□□□□ -2.24
CCNA1P78396 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.04□□□□□ -2.24
CCNA1P78396 AC007215.1-201ENST00000464893 276 ntBASIC1.04□□□□□ -2.24
CCNA1P78396 RPL23AP75-201ENST00000491601 451 ntBASIC1.04□□□□□ -2.24
CCNA1P78396 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.04□□□□□ -2.24
CCNA1P78396 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.04□□□□□ -2.24
CCNA1P78396 CBX3P8-201ENST00000532412 525 ntBASIC1.04□□□□□ -2.24
CCNA1P78396 ZNF519P2-201ENST00000557032 169 ntBASIC1.04□□□□□ -2.24
CCNA1P78396 NBR2-204ENST00000587322 63 ntBASIC1.04□□□□□ -2.24
CCNA1P78396 AC011712.1-201ENST00000588959 234 ntBASIC1.04□□□□□ -2.24
CCNA1P78396 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.04□□□□□ -2.24
CCNA1P78396 SNRPGP20-201ENST00000604477 205 ntBASIC1.04□□□□□ -2.24
CCNA1P78396 AC097065.2-201ENST00000608159 533 ntBASIC1.04□□□□□ -2.24
CCNA1P78396 AC137590.2-201ENST00000619709 240 ntBASIC1.04□□□□□ -2.24
CCNA1P78396 SNORD50.1-201ENST00000362987 71 ntBASIC1.03□□□□□ -2.24
CCNA1P78396 RNU6-254P-201ENST00000363377 107 ntBASIC1.03□□□□□ -2.24
CCNA1P78396 Y_RNA.151-201ENST00000363566 112 ntBASIC1.03□□□□□ -2.24
CCNA1P78396 RNU1-133P-201ENST00000364867 167 ntBASIC1.03□□□□□ -2.24
CCNA1P78396 RNU6-417P-201ENST00000384712 107 ntBASIC1.03□□□□□ -2.24
CCNA1P78396 MIR586-201ENST00000385035 97 ntBASIC1.03□□□□□ -2.24
CCNA1P78396 AL590002.1-201ENST00000406554 418 ntBASIC1.03□□□□□ -2.24
CCNA1P78396 AC016909.1-201ENST00000415916 166 ntBASIC1.03□□□□□ -2.24
CCNA1P78396 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.03□□□□□ -2.24
CCNA1P78396 AL445305.1-201ENST00000432577 575 ntBASIC1.03□□□□□ -2.24
CCNA1P78396 Z82188.1-201ENST00000436709 154 ntBASIC1.03□□□□□ -2.24
CCNA1P78396 MTND1P29-201ENST00000448112 647 ntBASIC1.03□□□□□ -2.24
CCNA1P78396 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.03□□□□□ -2.24
CCNA1P78396 AC079354.2-201ENST00000453523 154 ntBASIC1.03□□□□□ -2.24
CCNA1P78396 HMGN2P26-201ENST00000463169 339 ntBASIC1.03□□□□□ -2.24
CCNA1P78396 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.03□□□□□ -2.24
CCNA1P78396 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.03□□□□□ -2.24
CCNA1P78396 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.03□□□□□ -2.24
CCNA1P78396 AL162413.1-201ENST00000603198 110 ntBASIC1.03□□□□□ -2.24
CCNA1P78396 AL021879.1-201ENST00000611756 288 ntBASIC1.03□□□□□ -2.24
CCNA1P78396 MIR6779-201ENST00000617283 64 ntBASIC1.03□□□□□ -2.24
CCNA1P78396 AL078596.1-201ENST00000624856 447 ntBASIC1.03□□□□□ -2.24
CCNA1P78396 AC008873.1-201ENST00000625051 138 ntBASIC1.03□□□□□ -2.24
CCNA1P78396 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.03□□□□□ -2.24
CCNA1P78396 Y_RNA.287-201ENST00000364853 94 ntBASIC1.02□□□□□ -2.25
CCNA1P78396 RNU6-1105P-201ENST00000384774 107 ntBASIC1.02□□□□□ -2.25
CCNA1P78396 MIR1253-201ENST00000408273 105 ntBASIC1.02□□□□□ -2.25
CCNA1P78396 RNU6-908P-201ENST00000410160 94 ntBASIC1.02□□□□□ -2.25
CCNA1P78396 POLR2J4-204ENST00000418424 324 ntBASIC1.02□□□□□ -2.25
CCNA1P78396 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.02□□□□□ -2.25
CCNA1P78396 MTCO3P18-201ENST00000440206 761 ntBASIC1.02□□□□□ -2.25
CCNA1P78396 RNU7-57P-201ENST00000459540 60 ntBASIC1.02□□□□□ -2.25
CCNA1P78396 RPL39P38-201ENST00000467018 153 ntBASIC1.02□□□□□ -2.25
CCNA1P78396 RNA5SP436-201ENST00000516020 115 ntBASIC1.02□□□□□ -2.25
CCNA1P78396 SNORA70.22-201ENST00000517160 124 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms