Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 AC006504.8-201ENST00000621046 635 ntBASIC0.87□□□□□ -2.27
EIF3EP60228 AL359880.1-201ENST00000621879 266 ntBASIC0.87□□□□□ -2.27
EIF3EP60228 AL133216.2-202ENST00000634512 349 ntBASIC0.87□□□□□ -2.27
EIF3EP60228 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
EIF3EP60228 SNORD114-27-201ENST00000363766 70 ntBASIC0.86□□□□□ -2.27
EIF3EP60228 SNORD114-2-201ENST00000363953 78 ntBASIC0.86□□□□□ -2.27
EIF3EP60228 Y_RNA.372-201ENST00000365599 102 ntBASIC0.86□□□□□ -2.27
EIF3EP60228 RNU6-1080P-201ENST00000383982 107 ntBASIC0.86□□□□□ -2.27
EIF3EP60228 RNU6-95P-201ENST00000384697 107 ntBASIC0.86□□□□□ -2.27
EIF3EP60228 MIR153-2-201ENST00000385225 87 ntBASIC0.86□□□□□ -2.27
EIF3EP60228 MIR660-201ENST00000385235 97 ntBASIC0.86□□□□□ -2.27
EIF3EP60228 MTCO3P40-201ENST00000392516 676 ntBASIC0.86□□□□□ -2.27
EIF3EP60228 RNU6-1054P-201ENST00000411293 104 ntBASIC0.86□□□□□ -2.27
EIF3EP60228 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.86□□□□□ -2.27
EIF3EP60228 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.86□□□□□ -2.27
EIF3EP60228 MTND1P11-201ENST00000456661 876 ntBASIC0.86□□□□□ -2.27
EIF3EP60228 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.86□□□□□ -2.27
EIF3EP60228 HMGN1P7-201ENST00000491722 313 ntBASIC0.86□□□□□ -2.27
EIF3EP60228 TRBVA-201ENST00000498804 316 ntBASIC0.86□□□□□ -2.27
EIF3EP60228 Y_RNA.665-201ENST00000516177 98 ntBASIC0.86□□□□□ -2.27
EIF3EP60228 RN7SKP49-201ENST00000516675 260 ntBASIC0.86□□□□□ -2.27
EIF3EP60228 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.86□□□□□ -2.27
EIF3EP60228 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC0.86□□□□□ -2.27
EIF3EP60228 RN7SKP299-201ENST00000606679 301 ntBASIC0.86□□□□□ -2.27
EIF3EP60228 AC073349.3-201ENST00000617616 186 ntBASIC0.86□□□□□ -2.27
EIF3EP60228 AC124864.2-201ENST00000624736 186 ntBASIC0.86□□□□□ -2.27
EIF3EP60228 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
EIF3EP60228 SNORD114-24-201ENST00000365029 72 ntBASIC0.85□□□□□ -2.27
EIF3EP60228 RNU6-259P-201ENST00000383999 107 ntBASIC0.85□□□□□ -2.27
EIF3EP60228 Y_RNA.415-201ENST00000384012 112 ntBASIC0.85□□□□□ -2.27
EIF3EP60228 RNU6-790P-201ENST00000384479 105 ntBASIC0.85□□□□□ -2.27
EIF3EP60228 MIR653-201ENST00000385279 96 ntBASIC0.85□□□□□ -2.27
EIF3EP60228 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.85□□□□□ -2.27
EIF3EP60228 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.85□□□□□ -2.27
EIF3EP60228 DAP3P1-201ENST00000441522 278 ntBASIC0.85□□□□□ -2.27
EIF3EP60228 PCMTD1P1-201ENST00000455560 355 ntBASIC0.85□□□□□ -2.27
EIF3EP60228 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.85□□□□□ -2.27
EIF3EP60228 AC091179.3-201ENST00000474761 144 ntBASIC0.85□□□□□ -2.27
EIF3EP60228 AC005840.1-201ENST00000498412 377 ntBASIC0.85□□□□□ -2.27
EIF3EP60228 SNORA31.2-201ENST00000516019 134 ntBASIC0.85□□□□□ -2.27
EIF3EP60228 RNU6-405P-201ENST00000516637 110 ntBASIC0.85□□□□□ -2.27
EIF3EP60228 MTND1P15-201ENST00000579262 949 ntBASIC0.85□□□□□ -2.27
EIF3EP60228 MIR3611-201ENST00000584484 83 ntBASIC0.85□□□□□ -2.27
EIF3EP60228 AC010620.1-201ENST00000601088 1102 ntBASIC0.85□□□□□ -2.27
EIF3EP60228 AL162424.1-201ENST00000602325 221 ntBASIC0.85□□□□□ -2.27
EIF3EP60228 AC013244.2-201ENST00000603396 103 ntBASIC0.85□□□□□ -2.27
EIF3EP60228 MIR6857-201ENST00000613267 93 ntBASIC0.85□□□□□ -2.27
EIF3EP60228 AL359757.2-201ENST00000624309 274 ntBASIC0.85□□□□□ -2.27
EIF3EP60228 SNORD3E-202ENST00000627253 216 ntBASIC0.85□□□□□ -2.27
EIF3EP60228 RNU4-79P-201ENST00000362764 141 ntBASIC0.84□□□□□ -2.27
EIF3EP60228 MIR200A-201ENST00000384875 90 ntBASIC0.84□□□□□ -2.27
EIF3EP60228 RNU6-159P-201ENST00000391080 106 ntBASIC0.84□□□□□ -2.27
EIF3EP60228 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.84□□□□□ -2.27
EIF3EP60228 RNU2-66P-201ENST00000410650 161 ntBASIC0.84□□□□□ -2.27
EIF3EP60228 AC063976.4-201ENST00000421971 163 ntBASIC0.84□□□□□ -2.27
EIF3EP60228 RNU7-66P-201ENST00000459469 62 ntBASIC0.84□□□□□ -2.27
EIF3EP60228 RNU7-94P-201ENST00000459576 63 ntBASIC0.84□□□□□ -2.27
EIF3EP60228 AC048334.1-201ENST00000477975 159 ntBASIC0.84□□□□□ -2.27
EIF3EP60228 RPL30P10-201ENST00000488148 337 ntBASIC0.84□□□□□ -2.27
EIF3EP60228 TRMT112P2-201ENST00000512910 132 ntBASIC0.84□□□□□ -2.27
EIF3EP60228 RNU6-351P-201ENST00000516097 100 ntBASIC0.84□□□□□ -2.27
EIF3EP60228 RNU6-922P-201ENST00000516753 99 ntBASIC0.84□□□□□ -2.27
EIF3EP60228 MIR4498-201ENST00000577599 66 ntBASIC0.84□□□□□ -2.27
EIF3EP60228 MIR3973-201ENST00000579824 107 ntBASIC0.84□□□□□ -2.27
EIF3EP60228 PIGPP4-201ENST00000584447 307 ntBASIC0.84□□□□□ -2.27
EIF3EP60228 MIR4653-201ENST00000585107 83 ntBASIC0.84□□□□□ -2.27
EIF3EP60228 AC009248.2-201ENST00000619826 254 ntBASIC0.84□□□□□ -2.27
EIF3EP60228 AC106754.2-201ENST00000623006 233 ntBASIC0.84□□□□□ -2.27
EIF3EP60228 AC099654.12-201ENST00000639868 649 ntBASIC0.84□□□□□ -2.27
EIF3EP60228 Y_RNA.100-201ENST00000363141 102 ntBASIC0.83□□□□□ -2.28
EIF3EP60228 RNU4-76P-201ENST00000364509 141 ntBASIC0.83□□□□□ -2.28
EIF3EP60228 RNU6-17P-201ENST00000384245 107 ntBASIC0.83□□□□□ -2.28
EIF3EP60228 RNU6-18P-201ENST00000384527 107 ntBASIC0.83□□□□□ -2.28
EIF3EP60228 SNORD41-201ENST00000386967 70 ntBASIC0.83□□□□□ -2.28
EIF3EP60228 RNU6-910P-201ENST00000390844 107 ntBASIC0.83□□□□□ -2.28
EIF3EP60228 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.83□□□□□ -2.28
EIF3EP60228 AL590632.1-201ENST00000424289 371 ntBASIC0.83□□□□□ -2.28
EIF3EP60228 AL445305.1-201ENST00000432577 575 ntBASIC0.83□□□□□ -2.28
EIF3EP60228 SEPT14P3-201ENST00000439401 183 ntBASIC0.83□□□□□ -2.28
EIF3EP60228 AL732372.2-207ENST00000445840 183 ntBASIC0.83□□□□□ -2.28
EIF3EP60228 SEPT14P2-201ENST00000453405 183 ntBASIC0.83□□□□□ -2.28
EIF3EP60228 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.83□□□□□ -2.28
EIF3EP60228 AC105758.1-201ENST00000506038 399 ntBASIC0.83□□□□□ -2.28
EIF3EP60228 PDCD5P2-201ENST00000507570 312 ntBASIC0.83□□□□□ -2.28
EIF3EP60228 SEPT14P4-201ENST00000513445 186 ntBASIC0.83□□□□□ -2.28
EIF3EP60228 FO082796.1-201ENST00000523795 183 ntBASIC0.83□□□□□ -2.28
EIF3EP60228 MTND3P12-201ENST00000559068 328 ntBASIC0.83□□□□□ -2.28
EIF3EP60228 POLR3GP2-201ENST00000588366 668 ntBASIC0.83□□□□□ -2.28
EIF3EP60228 AC010525.2-201ENST00000590920 195 ntBASIC0.83□□□□□ -2.28
EIF3EP60228 GHRLOS.1-201ENST00000610995 70 ntBASIC0.83□□□□□ -2.28
EIF3EP60228 AL138726.1-201ENST00000614873 333 ntBASIC0.83□□□□□ -2.28
EIF3EP60228 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.83□□□□□ -2.28
EIF3EP60228 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
EIF3EP60228 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
EIF3EP60228 AC018630.2-201ENST00000534866 2403 ntBASIC0.83□□□□□ -2.28
EIF3EP60228 RNU6-1266P-201ENST00000362794 105 ntBASIC0.82□□□□□ -2.28
EIF3EP60228 Y_RNA.135-201ENST00000363439 95 ntBASIC0.82□□□□□ -2.28
EIF3EP60228 RNU6-727P-201ENST00000363592 107 ntBASIC0.82□□□□□ -2.28
EIF3EP60228 RNU6-1042P-201ENST00000384204 107 ntBASIC0.82□□□□□ -2.28
EIF3EP60228 RNU6-793P-201ENST00000384233 104 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms