Protein–RNA interactions for Protein: P57682

KLF3, Krueppel-like factor 3, humanhuman

Predicted RBP Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF3P57682 RNU4-9P-201ENST00000364951 139 ntBASIC0.79□□□□□ -2.28
KLF3P57682 RNU6-933P-201ENST00000384424 107 ntBASIC0.79□□□□□ -2.28
KLF3P57682 RNU6-1031P-201ENST00000384773 107 ntBASIC0.79□□□□□ -2.28
KLF3P57682 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
KLF3P57682 AL590002.1-201ENST00000406554 418 ntBASIC0.79□□□□□ -2.28
KLF3P57682 MIR1185-2-201ENST00000408687 86 ntBASIC0.79□□□□□ -2.28
KLF3P57682 AC010154.1-201ENST00000425857 269 ntBASIC0.79□□□□□ -2.28
KLF3P57682 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.79□□□□□ -2.28
KLF3P57682 NDUFB4P10-201ENST00000452541 359 ntBASIC0.79□□□□□ -2.28
KLF3P57682 RPL30P10-201ENST00000488148 337 ntBASIC0.79□□□□□ -2.28
KLF3P57682 RNU6-1281P-201ENST00000516223 105 ntBASIC0.79□□□□□ -2.28
KLF3P57682 RNU1-117P-201ENST00000517041 158 ntBASIC0.79□□□□□ -2.28
KLF3P57682 RNA5SP454-201ENST00000517231 127 ntBASIC0.79□□□□□ -2.28
KLF3P57682 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.79□□□□□ -2.28
KLF3P57682 ZNF519P2-201ENST00000557032 169 ntBASIC0.79□□□□□ -2.28
KLF3P57682 FRG2DP-202ENST00000566967 323 ntBASIC0.79□□□□□ -2.28
KLF3P57682 MIR3672-201ENST00000584290 82 ntBASIC0.79□□□□□ -2.28
KLF3P57682 PIGPP4-201ENST00000584447 307 ntBASIC0.79□□□□□ -2.28
KLF3P57682 AL162413.1-201ENST00000603198 110 ntBASIC0.79□□□□□ -2.28
KLF3P57682 AC136443.5-201ENST00000603741 370 ntBASIC0.79□□□□□ -2.28
KLF3P57682 SNORD11B-201ENST00000607707 90 ntBASIC0.79□□□□□ -2.28
KLF3P57682 AC040896.1-201ENST00000613819 479 ntBASIC0.79□□□□□ -2.28
KLF3P57682 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.79□□□□□ -2.28
KLF3P57682 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
KLF3P57682 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
KLF3P57682 MIR96-201ENST00000362288 78 ntBASIC0.78□□□□□ -2.28
KLF3P57682 Y_RNA.38-201ENST00000362617 102 ntBASIC0.78□□□□□ -2.28
KLF3P57682 Y_RNA.41-201ENST00000362646 102 ntBASIC0.78□□□□□ -2.28
KLF3P57682 RNU6-1252P-201ENST00000363054 104 ntBASIC0.78□□□□□ -2.28
KLF3P57682 Y_RNA.238-201ENST00000364441 102 ntBASIC0.78□□□□□ -2.28
KLF3P57682 SNORD87-201ENST00000364849 89 ntBASIC0.78□□□□□ -2.28
KLF3P57682 RNU6-1240P-201ENST00000365155 104 ntBASIC0.78□□□□□ -2.28
KLF3P57682 RNU6-1065P-201ENST00000384513 106 ntBASIC0.78□□□□□ -2.28
KLF3P57682 MIR32-201ENST00000384965 70 ntBASIC0.78□□□□□ -2.28
KLF3P57682 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
KLF3P57682 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.78□□□□□ -2.28
KLF3P57682 AC008134.1-201ENST00000420943 193 ntBASIC0.78□□□□□ -2.28
KLF3P57682 SNX2P2-201ENST00000424553 323 ntBASIC0.78□□□□□ -2.28
KLF3P57682 DAP3P1-201ENST00000441522 278 ntBASIC0.78□□□□□ -2.28
KLF3P57682 AC074290.1-201ENST00000448883 135 ntBASIC0.78□□□□□ -2.28
KLF3P57682 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.78□□□□□ -2.28
KLF3P57682 RNU7-34P-201ENST00000459394 64 ntBASIC0.78□□□□□ -2.28
KLF3P57682 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.78□□□□□ -2.28
KLF3P57682 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.78□□□□□ -2.28
KLF3P57682 RNA5SP404-201ENST00000517118 132 ntBASIC0.78□□□□□ -2.28
KLF3P57682 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.78□□□□□ -2.28
KLF3P57682 AL359075.3-201ENST00000613288 217 ntBASIC0.78□□□□□ -2.28
KLF3P57682 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.78□□□□□ -2.28
KLF3P57682 AC099654.12-201ENST00000639868 649 ntBASIC0.78□□□□□ -2.28
KLF3P57682 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.28
KLF3P57682 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
KLF3P57682 U3.8-201ENST00000363675 217 ntBASIC0.77□□□□□ -2.29
KLF3P57682 RNU6-137P-201ENST00000363680 108 ntBASIC0.77□□□□□ -2.29
KLF3P57682 RNU6-873P-201ENST00000363833 107 ntBASIC0.77□□□□□ -2.29
KLF3P57682 Y_RNA.319-201ENST00000365138 92 ntBASIC0.77□□□□□ -2.29
KLF3P57682 Y_RNA.373-201ENST00000365600 103 ntBASIC0.77□□□□□ -2.29
KLF3P57682 Y_RNA.415-201ENST00000384012 112 ntBASIC0.77□□□□□ -2.29
KLF3P57682 RNU6-17P-201ENST00000384245 107 ntBASIC0.77□□□□□ -2.29
KLF3P57682 RNU6-18P-201ENST00000384527 107 ntBASIC0.77□□□□□ -2.29
KLF3P57682 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
KLF3P57682 MIR320B2-201ENST00000408479 138 ntBASIC0.77□□□□□ -2.29
KLF3P57682 AL353572.1-201ENST00000442490 417 ntBASIC0.77□□□□□ -2.29
KLF3P57682 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.77□□□□□ -2.29
KLF3P57682 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.77□□□□□ -2.29
KLF3P57682 PCMTD1P1-201ENST00000455560 355 ntBASIC0.77□□□□□ -2.29
KLF3P57682 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.77□□□□□ -2.29
KLF3P57682 AC091179.3-201ENST00000474761 144 ntBASIC0.77□□□□□ -2.29
KLF3P57682 TRBVA-201ENST00000498804 316 ntBASIC0.77□□□□□ -2.29
KLF3P57682 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.77□□□□□ -2.29
KLF3P57682 MTND2P38-201ENST00000522536 667 ntBASIC0.77□□□□□ -2.29
KLF3P57682 CBX3P8-201ENST00000532412 525 ntBASIC0.77□□□□□ -2.29
KLF3P57682 MIR5696-201ENST00000578474 85 ntBASIC0.77□□□□□ -2.29
KLF3P57682 MIR5695-201ENST00000579717 85 ntBASIC0.77□□□□□ -2.29
KLF3P57682 U6.73-201ENST00000619194 103 ntBASIC0.77□□□□□ -2.29
KLF3P57682 AC009248.2-201ENST00000619826 254 ntBASIC0.77□□□□□ -2.29
KLF3P57682 MIR8054-201ENST00000620877 86 ntBASIC0.77□□□□□ -2.29
KLF3P57682 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.77□□□□□ -2.29
KLF3P57682 MIR1321-201ENST00000637766 79 ntBASIC0.77□□□□□ -2.29
KLF3P57682 RNU1-124P-201ENST00000363861 145 ntBASIC0.76□□□□□ -2.29
KLF3P57682 Y_RNA.212-201ENST00000364177 102 ntBASIC0.76□□□□□ -2.29
KLF3P57682 RNU1-93P-201ENST00000364704 169 ntBASIC0.76□□□□□ -2.29
KLF3P57682 SNORD114-22-201ENST00000365423 72 ntBASIC0.76□□□□□ -2.29
KLF3P57682 RNU6-790P-201ENST00000384479 105 ntBASIC0.76□□□□□ -2.29
KLF3P57682 Y_RNA.530-201ENST00000384587 101 ntBASIC0.76□□□□□ -2.29
KLF3P57682 MIR517A-201ENST00000385001 87 ntBASIC0.76□□□□□ -2.29
KLF3P57682 MIR153-2-201ENST00000385225 87 ntBASIC0.76□□□□□ -2.29
KLF3P57682 RNU6-159P-201ENST00000391080 106 ntBASIC0.76□□□□□ -2.29
KLF3P57682 MIR1253-201ENST00000408273 105 ntBASIC0.76□□□□□ -2.29
KLF3P57682 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.76□□□□□ -2.29
KLF3P57682 ZNF885P-201ENST00000420174 1098 ntBASIC0.76□□□□□ -2.29
KLF3P57682 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.76□□□□□ -2.29
KLF3P57682 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.76□□□□□ -2.29
KLF3P57682 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.76□□□□□ -2.29
KLF3P57682 SNORD116-28-201ENST00000516123 91 ntBASIC0.76□□□□□ -2.29
KLF3P57682 SNORA25.14-201ENST00000516481 132 ntBASIC0.76□□□□□ -2.29
KLF3P57682 RNU1-142P-201ENST00000516682 145 ntBASIC0.76□□□□□ -2.29
KLF3P57682 RNU6-256P-201ENST00000516747 97 ntBASIC0.76□□□□□ -2.29
KLF3P57682 SUMO2P16-201ENST00000519475 264 ntBASIC0.76□□□□□ -2.29
KLF3P57682 UBL5P4-201ENST00000562584 236 ntBASIC0.76□□□□□ -2.29
KLF3P57682 AC004584.2-201ENST00000570407 410 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms