Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RNU6-107P-201ENST00000516643 102 ntBASIC2□□□□□ -2.09
CLDN20P56880 MIR4659A-201ENST00000580269 81 ntBASIC2□□□□□ -2.09
CLDN20P56880 MIR4680-201ENST00000580906 66 ntBASIC2□□□□□ -2.09
CLDN20P56880 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2□□□□□ -2.09
CLDN20P56880 AC124312.5-201ENST00000604451 268 ntBASIC2□□□□□ -2.09
CLDN20P56880 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2□□□□□ -2.09
CLDN20P56880 AC240442.1-201ENST00000616055 283 ntBASIC2□□□□□ -2.09
CLDN20P56880 AC010205.1-201ENST00000616668 449 ntBASIC2□□□□□ -2.09
CLDN20P56880 MIR6873-201ENST00000622788 63 ntBASIC2□□□□□ -2.09
CLDN20P56880 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2□□□□□ -2.09
CLDN20P56880 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CLDN20P56880 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2□□□□□ -2.09
CLDN20P56880 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
CLDN20P56880 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.99□□□□□ -2.09
CLDN20P56880 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CLDN20P56880 Y_RNA.551-201ENST00000384661 102 ntBASIC1.99□□□□□ -2.09
CLDN20P56880 RNU6-823P-201ENST00000391042 103 ntBASIC1.99□□□□□ -2.09
CLDN20P56880 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.99□□□□□ -2.09
CLDN20P56880 TOMM22P2-201ENST00000430735 237 ntBASIC1.99□□□□□ -2.09
CLDN20P56880 RPL26P26-201ENST00000480251 434 ntBASIC1.99□□□□□ -2.09
CLDN20P56880 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.99□□□□□ -2.09
CLDN20P56880 MIR1273D-201ENST00000577266 86 ntBASIC1.99□□□□□ -2.09
CLDN20P56880 MIR4448-201ENST00000584360 86 ntBASIC1.99□□□□□ -2.09
CLDN20P56880 AC006504.6-201ENST00000590142 199 ntBASIC1.99□□□□□ -2.09
CLDN20P56880 AC022432.1-201ENST00000595739 310 ntBASIC1.99□□□□□ -2.09
CLDN20P56880 MIR6840-201ENST00000611937 71 ntBASIC1.99□□□□□ -2.09
CLDN20P56880 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.99□□□□□ -2.09
CLDN20P56880 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.99□□□□□ -2.09
CLDN20P56880 snoZ196.1-201ENST00000625269 89 ntBASIC1.99□□□□□ -2.09
CLDN20P56880 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.99□□□□□ -2.09
CLDN20P56880 MIR410-201ENST00000362222 80 ntBASIC1.98□□□□□ -2.09
CLDN20P56880 SNORD115-3-201ENST00000363100 82 ntBASIC1.98□□□□□ -2.09
CLDN20P56880 U8.2-201ENST00000363156 134 ntBASIC1.98□□□□□ -2.09
CLDN20P56880 Y_RNA.380-201ENST00000365663 111 ntBASIC1.98□□□□□ -2.09
CLDN20P56880 RNU6-1310P-201ENST00000384153 107 ntBASIC1.98□□□□□ -2.09
CLDN20P56880 SNORA70B-201ENST00000384210 135 ntBASIC1.98□□□□□ -2.09
CLDN20P56880 Y_RNA.458-201ENST00000384240 102 ntBASIC1.98□□□□□ -2.09
CLDN20P56880 HMGN2P39-201ENST00000398005 273 ntBASIC1.98□□□□□ -2.09
CLDN20P56880 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.98□□□□□ -2.09
CLDN20P56880 RAB28P5-201ENST00000427490 651 ntBASIC1.98□□□□□ -2.09
CLDN20P56880 AC016717.1-201ENST00000448918 286 ntBASIC1.98□□□□□ -2.09
CLDN20P56880 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.98□□□□□ -2.09
CLDN20P56880 U8.20-201ENST00000459445 131 ntBASIC1.98□□□□□ -2.09
CLDN20P56880 RNU6-408P-201ENST00000515910 100 ntBASIC1.98□□□□□ -2.09
CLDN20P56880 RNU1-41P-201ENST00000516161 162 ntBASIC1.98□□□□□ -2.09
CLDN20P56880 RNU1-48P-201ENST00000516400 162 ntBASIC1.98□□□□□ -2.09
CLDN20P56880 RNU6-856P-201ENST00000516959 98 ntBASIC1.98□□□□□ -2.09
CLDN20P56880 Y_RNA.713-201ENST00000517013 96 ntBASIC1.98□□□□□ -2.09
CLDN20P56880 MIR3945-201ENST00000581853 98 ntBASIC1.98□□□□□ -2.09
CLDN20P56880 Y_RNA.772-201ENST00000606692 102 ntBASIC1.98□□□□□ -2.09
CLDN20P56880 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.98□□□□□ -2.09
CLDN20P56880 AC007742.2-201ENST00000618226 398 ntBASIC1.98□□□□□ -2.09
CLDN20P56880 AL162373.1-201ENST00000620433 407 ntBASIC1.98□□□□□ -2.09
CLDN20P56880 AC130454.1-201ENST00000622948 401 ntBASIC1.98□□□□□ -2.09
CLDN20P56880 AC012640.5-201ENST00000623897 319 ntBASIC1.98□□□□□ -2.09
CLDN20P56880 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.98□□□□□ -2.09
CLDN20P56880 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
CLDN20P56880 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CLDN20P56880 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CLDN20P56880 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.97□□□□□ -2.09
CLDN20P56880 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
CLDN20P56880 RNU6-450P-201ENST00000364654 107 ntBASIC1.97□□□□□ -2.09
CLDN20P56880 Y_RNA.455-201ENST00000384230 98 ntBASIC1.97□□□□□ -2.09
CLDN20P56880 Y_RNA.471-201ENST00000384312 102 ntBASIC1.97□□□□□ -2.09
CLDN20P56880 MIR1185-2-201ENST00000408687 86 ntBASIC1.97□□□□□ -2.09
CLDN20P56880 MIR1252-201ENST00000408861 65 ntBASIC1.97□□□□□ -2.09
CLDN20P56880 RNU6-57P-201ENST00000411348 103 ntBASIC1.97□□□□□ -2.09
CLDN20P56880 OOSP1P1-201ENST00000423265 274 ntBASIC1.97□□□□□ -2.09
CLDN20P56880 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CLDN20P56880 RPEP5-201ENST00000441137 268 ntBASIC1.97□□□□□ -2.09
CLDN20P56880 RPL23AP7-203ENST00000449021 469 ntBASIC1.97□□□□□ -2.09
CLDN20P56880 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.97□□□□□ -2.09
CLDN20P56880 RNU6-221P-201ENST00000459541 99 ntBASIC1.97□□□□□ -2.09
CLDN20P56880 Y_RNA.715-201ENST00000517082 110 ntBASIC1.97□□□□□ -2.09
CLDN20P56880 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.97□□□□□ -2.09
CLDN20P56880 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.97□□□□□ -2.09
CLDN20P56880 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.97□□□□□ -2.09
CLDN20P56880 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.97□□□□□ -2.09
CLDN20P56880 AC009831.4-201ENST00000620744 325 ntBASIC1.97□□□□□ -2.09
CLDN20P56880 MIR3674-201ENST00000636576 68 ntBASIC1.97□□□□□ -2.09
CLDN20P56880 AL596028.1-201ENST00000326971 197 ntBASIC1.96□□□□□ -2.1
CLDN20P56880 RNU1-58P-201ENST00000362413 163 ntBASIC1.96□□□□□ -2.1
CLDN20P56880 RNU6-961P-201ENST00000363893 105 ntBASIC1.96□□□□□ -2.1
CLDN20P56880 SNORD114-6-201ENST00000364393 72 ntBASIC1.96□□□□□ -2.1
CLDN20P56880 SNORA6-201ENST00000384033 151 ntBASIC1.96□□□□□ -2.1
CLDN20P56880 Y_RNA.527-201ENST00000384573 102 ntBASIC1.96□□□□□ -2.1
CLDN20P56880 MIR518A2-201ENST00000384966 87 ntBASIC1.96□□□□□ -2.1
CLDN20P56880 RNU6-985P-201ENST00000410182 104 ntBASIC1.96□□□□□ -2.1
CLDN20P56880 DPH3P2-201ENST00000422618 250 ntBASIC1.96□□□□□ -2.1
CLDN20P56880 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.96□□□□□ -2.1
CLDN20P56880 RNU7-193P-201ENST00000516723 65 ntBASIC1.96□□□□□ -2.1
CLDN20P56880 RNU6-1137P-201ENST00000517073 99 ntBASIC1.96□□□□□ -2.1
CLDN20P56880 SNORA31.25-201ENST00000517242 134 ntBASIC1.96□□□□□ -2.1
CLDN20P56880 AC113195.1-201ENST00000579952 141 ntBASIC1.96□□□□□ -2.1
CLDN20P56880 AC002984.1-201ENST00000591692 448 ntBASIC1.96□□□□□ -2.1
CLDN20P56880 AL109918.3-201ENST00000603072 338 ntBASIC1.96□□□□□ -2.1
CLDN20P56880 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.96□□□□□ -2.1
CLDN20P56880 AC011476.5-201ENST00000615594 130 ntBASIC1.96□□□□□ -2.1
CLDN20P56880 AL590240.4-201ENST00000616908 390 ntBASIC1.96□□□□□ -2.1
CLDN20P56880 RNU6-23P-201ENST00000363283 107 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms