Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 USP9YP23-201ENST00000455085 407 ntBASIC1.65□□□□□ -2.15
PEX3P56589 Y_RNA.632-201ENST00000459189 102 ntBASIC1.65□□□□□ -2.15
PEX3P56589 AC023790.1-201ENST00000482174 347 ntBASIC1.65□□□□□ -2.15
PEX3P56589 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.65□□□□□ -2.15
PEX3P56589 AC090617.3-201ENST00000573670 475 ntBASIC1.65□□□□□ -2.15
PEX3P56589 MIR5690-201ENST00000583739 73 ntBASIC1.65□□□□□ -2.15
PEX3P56589 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.65□□□□□ -2.15
PEX3P56589 AC130454.1-201ENST00000622948 401 ntBASIC1.65□□□□□ -2.15
PEX3P56589 MTND4LP32-201ENST00000636111 270 ntBASIC1.65□□□□□ -2.15
PEX3P56589 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
PEX3P56589 MTND5P16-201ENST00000460269 1703 ntBASIC1.65□□□□□ -2.15
PEX3P56589 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
PEX3P56589 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
PEX3P56589 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
PEX3P56589 RNU4-13P-201ENST00000364019 141 ntBASIC1.64□□□□□ -2.15
PEX3P56589 RNU6-280P-201ENST00000364145 104 ntBASIC1.64□□□□□ -2.15
PEX3P56589 RNU6-541P-201ENST00000384709 110 ntBASIC1.64□□□□□ -2.15
PEX3P56589 RNU6-700P-201ENST00000391043 107 ntBASIC1.64□□□□□ -2.15
PEX3P56589 AC016909.1-201ENST00000415916 166 ntBASIC1.64□□□□□ -2.15
PEX3P56589 AC060773.1-201ENST00000421698 310 ntBASIC1.64□□□□□ -2.15
PEX3P56589 AL354695.1-201ENST00000427935 228 ntBASIC1.64□□□□□ -2.15
PEX3P56589 AC099677.2-201ENST00000436385 175 ntBASIC1.64□□□□□ -2.15
PEX3P56589 SNORD19B-201ENST00000459623 84 ntBASIC1.64□□□□□ -2.15
PEX3P56589 RNVU1-2-201ENST00000516326 135 ntBASIC1.64□□□□□ -2.15
PEX3P56589 AP005660.1-201ENST00000522972 293 ntBASIC1.64□□□□□ -2.15
PEX3P56589 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.64□□□□□ -2.15
PEX3P56589 MIR4299-201ENST00000577899 72 ntBASIC1.64□□□□□ -2.15
PEX3P56589 MIR4753-201ENST00000585119 83 ntBASIC1.64□□□□□ -2.15
PEX3P56589 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.64□□□□□ -2.15
PEX3P56589 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
PEX3P56589 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.64□□□□□ -2.15
PEX3P56589 AC087588.2-201ENST00000617667 426 ntBASIC1.64□□□□□ -2.15
PEX3P56589 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.63□□□□□ -2.15
PEX3P56589 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
PEX3P56589 RNU6-99P-201ENST00000364721 107 ntBASIC1.63□□□□□ -2.15
PEX3P56589 Y_RNA.415-201ENST00000384012 112 ntBASIC1.63□□□□□ -2.15
PEX3P56589 RNU6-793P-201ENST00000384233 104 ntBASIC1.63□□□□□ -2.15
PEX3P56589 Y_RNA.557-201ENST00000384680 107 ntBASIC1.63□□□□□ -2.15
PEX3P56589 Y_RNA.577-201ENST00000384794 101 ntBASIC1.63□□□□□ -2.15
PEX3P56589 MIR329-1-201ENST00000385028 80 ntBASIC1.63□□□□□ -2.15
PEX3P56589 MIR548B-201ENST00000385247 97 ntBASIC1.63□□□□□ -2.15
PEX3P56589 RNU6-1001P-201ENST00000411265 100 ntBASIC1.63□□□□□ -2.15
PEX3P56589 AC009310.1-201ENST00000414414 451 ntBASIC1.63□□□□□ -2.15
PEX3P56589 AC093019.1-201ENST00000443135 252 ntBASIC1.63□□□□□ -2.15
PEX3P56589 AC016717.1-201ENST00000448918 286 ntBASIC1.63□□□□□ -2.15
PEX3P56589 Y_RNA.653-201ENST00000459091 95 ntBASIC1.63□□□□□ -2.15
PEX3P56589 AC022493.2-201ENST00000506122 481 ntBASIC1.63□□□□□ -2.15
PEX3P56589 MTND3P22-201ENST00000510932 243 ntBASIC1.63□□□□□ -2.15
PEX3P56589 RNU6-470P-201ENST00000515954 104 ntBASIC1.63□□□□□ -2.15
PEX3P56589 SNORA31.24-201ENST00000517232 57 ntBASIC1.63□□□□□ -2.15
PEX3P56589 RAB11AP2-201ENST00000545905 639 ntBASIC1.63□□□□□ -2.15
PEX3P56589 SUB1P4-201ENST00000566062 339 ntBASIC1.63□□□□□ -2.15
PEX3P56589 MIR5695-201ENST00000579717 85 ntBASIC1.63□□□□□ -2.15
PEX3P56589 AP000942.3-201ENST00000603702 160 ntBASIC1.63□□□□□ -2.15
PEX3P56589 CYP2C61P-201ENST00000604072 290 ntBASIC1.63□□□□□ -2.15
PEX3P56589 MZT1P2-201ENST00000604387 248 ntBASIC1.63□□□□□ -2.15
PEX3P56589 AC080078.3-201ENST00000605407 463 ntBASIC1.63□□□□□ -2.15
PEX3P56589 AC084781.2-201ENST00000615568 161 ntBASIC1.63□□□□□ -2.15
PEX3P56589 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.63□□□□□ -2.15
PEX3P56589 WWP1P1-201ENST00000466609 2769 ntBASIC1.63□□□□□ -2.15
PEX3P56589 Y_RNA.132-201ENST00000363421 102 ntBASIC1.62□□□□□ -2.15
PEX3P56589 RNU5F-3P-201ENST00000363767 117 ntBASIC1.62□□□□□ -2.15
PEX3P56589 RNU6-1305P-201ENST00000364353 104 ntBASIC1.62□□□□□ -2.15
PEX3P56589 SNORD87-201ENST00000364849 89 ntBASIC1.62□□□□□ -2.15
PEX3P56589 RNU6-1145P-201ENST00000384246 107 ntBASIC1.62□□□□□ -2.15
PEX3P56589 RNU6-318P-201ENST00000384283 103 ntBASIC1.62□□□□□ -2.15
PEX3P56589 RNA5SP100-201ENST00000410903 110 ntBASIC1.62□□□□□ -2.15
PEX3P56589 RNA5SP59-201ENST00000410922 110 ntBASIC1.62□□□□□ -2.15
PEX3P56589 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.62□□□□□ -2.15
PEX3P56589 RNU6-221P-201ENST00000459541 99 ntBASIC1.62□□□□□ -2.15
PEX3P56589 AC114982.1-201ENST00000469402 321 ntBASIC1.62□□□□□ -2.15
PEX3P56589 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.62□□□□□ -2.15
PEX3P56589 RNU6-948P-201ENST00000516374 107 ntBASIC1.62□□□□□ -2.15
PEX3P56589 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.62□□□□□ -2.15
PEX3P56589 AC093023.1-201ENST00000547375 507 ntBASIC1.62□□□□□ -2.15
PEX3P56589 AC010999.1-201ENST00000611856 324 ntBASIC1.62□□□□□ -2.15
PEX3P56589 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.62□□□□□ -2.15
PEX3P56589 MIR1244-1-201ENST00000612829 85 ntBASIC1.62□□□□□ -2.15
PEX3P56589 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.62□□□□□ -2.15
PEX3P56589 AC091925.1-201ENST00000623204 462 ntBASIC1.62□□□□□ -2.15
PEX3P56589 AL078596.1-201ENST00000624856 447 ntBASIC1.62□□□□□ -2.15
PEX3P56589 MIR1244-3-201ENST00000635744 85 ntBASIC1.62□□□□□ -2.15
PEX3P56589 MIR1244-2-201ENST00000636449 85 ntBASIC1.62□□□□□ -2.15
PEX3P56589 MIR1244-4-202ENST00000636813 85 ntBASIC1.62□□□□□ -2.15
PEX3P56589 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.62□□□□□ -2.15
PEX3P56589 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.62□□□□□ -2.15
PEX3P56589 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.61□□□□□ -2.15
PEX3P56589 RNU6-1115P-201ENST00000362490 106 ntBASIC1.61□□□□□ -2.15
PEX3P56589 RNA5SP361-201ENST00000362686 118 ntBASIC1.61□□□□□ -2.15
PEX3P56589 RNU4-73P-201ENST00000363164 141 ntBASIC1.61□□□□□ -2.15
PEX3P56589 U3.8-201ENST00000363675 217 ntBASIC1.61□□□□□ -2.15
PEX3P56589 Y_RNA.179-201ENST00000363844 90 ntBASIC1.61□□□□□ -2.15
PEX3P56589 RNU6-1040P-201ENST00000383974 107 ntBASIC1.61□□□□□ -2.15
PEX3P56589 RNU6-997P-201ENST00000384725 107 ntBASIC1.61□□□□□ -2.15
PEX3P56589 MIR320A-201ENST00000385302 82 ntBASIC1.61□□□□□ -2.15
PEX3P56589 AC007098.1-201ENST00000420122 367 ntBASIC1.61□□□□□ -2.15
PEX3P56589 MRPS18CP6-201ENST00000423587 223 ntBASIC1.61□□□□□ -2.15
PEX3P56589 ATP5J2P3-201ENST00000451550 258 ntBASIC1.61□□□□□ -2.15
PEX3P56589 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.61□□□□□ -2.15
PEX3P56589 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms