Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HMGCS2P54868 RNU5F-4P-201ENST00000516581 114 ntBASIC1.66□□□□□ -2.14
HMGCS2P54868 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.66□□□□□ -2.14
HMGCS2P54868 AC026470.2-201ENST00000561492 181 ntBASIC1.66□□□□□ -2.14
HMGCS2P54868 AC005899.2-201ENST00000584353 90 ntBASIC1.66□□□□□ -2.14
HMGCS2P54868 C8orf59P2-201ENST00000603441 271 ntBASIC1.66□□□□□ -2.14
HMGCS2P54868 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.66□□□□□ -2.14
HMGCS2P54868 MIR6504-201ENST00000613520 61 ntBASIC1.66□□□□□ -2.14
HMGCS2P54868 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.66□□□□□ -2.14
HMGCS2P54868 AC084781.2-201ENST00000615568 161 ntBASIC1.66□□□□□ -2.14
HMGCS2P54868 AL008636.1-201ENST00000625038 1018 ntBASIC1.66□□□□□ -2.14
HMGCS2P54868 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.66□□□□□ -2.14
HMGCS2P54868 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
HMGCS2P54868 RNU6-222P-201ENST00000362438 107 ntBASIC1.65□□□□□ -2.15
HMGCS2P54868 Y_RNA.99-201ENST00000363138 105 ntBASIC1.65□□□□□ -2.15
HMGCS2P54868 Y_RNA.106-201ENST00000363189 100 ntBASIC1.65□□□□□ -2.15
HMGCS2P54868 Y_RNA.796-201ENST00000364268 102 ntBASIC1.65□□□□□ -2.15
HMGCS2P54868 Y_RNA.799-201ENST00000364992 102 ntBASIC1.65□□□□□ -2.15
HMGCS2P54868 SNORD14D-201ENST00000384390 87 ntBASIC1.65□□□□□ -2.15
HMGCS2P54868 SNORA8-201ENST00000384574 139 ntBASIC1.65□□□□□ -2.15
HMGCS2P54868 MIR518E-201ENST00000385252 88 ntBASIC1.65□□□□□ -2.15
HMGCS2P54868 AL357139.1-201ENST00000407792 426 ntBASIC1.65□□□□□ -2.15
HMGCS2P54868 RNA5SP504-201ENST00000410676 117 ntBASIC1.65□□□□□ -2.15
HMGCS2P54868 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.65□□□□□ -2.15
HMGCS2P54868 AC009237.7-201ENST00000447357 229 ntBASIC1.65□□□□□ -2.15
HMGCS2P54868 RPL30P15-201ENST00000457129 321 ntBASIC1.65□□□□□ -2.15
HMGCS2P54868 RNU1-123P-201ENST00000458950 160 ntBASIC1.65□□□□□ -2.15
HMGCS2P54868 RNU7-152P-201ENST00000458982 64 ntBASIC1.65□□□□□ -2.15
HMGCS2P54868 Y_RNA.653-201ENST00000459091 95 ntBASIC1.65□□□□□ -2.15
HMGCS2P54868 RPL17P19-201ENST00000489069 552 ntBASIC1.65□□□□□ -2.15
HMGCS2P54868 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.65□□□□□ -2.15
HMGCS2P54868 RNA5SP54-201ENST00000516951 92 ntBASIC1.65□□□□□ -2.15
HMGCS2P54868 MIR5006-201ENST00000583027 110 ntBASIC1.65□□□□□ -2.15
HMGCS2P54868 MIR4795-201ENST00000584182 89 ntBASIC1.65□□□□□ -2.15
HMGCS2P54868 AC100812.1-201ENST00000607622 580 ntBASIC1.65□□□□□ -2.15
HMGCS2P54868 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.65□□□□□ -2.15
HMGCS2P54868 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.65□□□□□ -2.15
HMGCS2P54868 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.65□□□□□ -2.15
HMGCS2P54868 AL359697.1-201ENST00000624879 587 ntBASIC1.65□□□□□ -2.15
HMGCS2P54868 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.65□□□□□ -2.15
HMGCS2P54868 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
HMGCS2P54868 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
HMGCS2P54868 RNU4-79P-201ENST00000362764 141 ntBASIC1.64□□□□□ -2.15
HMGCS2P54868 RNU6-873P-201ENST00000363833 107 ntBASIC1.64□□□□□ -2.15
HMGCS2P54868 Y_RNA.509-201ENST00000384506 99 ntBASIC1.64□□□□□ -2.15
HMGCS2P54868 MIR559-201ENST00000385188 96 ntBASIC1.64□□□□□ -2.15
HMGCS2P54868 RNU1-139P-201ENST00000391307 165 ntBASIC1.64□□□□□ -2.15
HMGCS2P54868 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
HMGCS2P54868 AC123900.1-201ENST00000420390 96 ntBASIC1.64□□□□□ -2.15
HMGCS2P54868 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.64□□□□□ -2.15
HMGCS2P54868 MTCYBP10-201ENST00000424905 650 ntBASIC1.64□□□□□ -2.15
HMGCS2P54868 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.64□□□□□ -2.15
HMGCS2P54868 MTCO1P44-201ENST00000441935 243 ntBASIC1.64□□□□□ -2.15
HMGCS2P54868 SNRPGP13-201ENST00000442212 177 ntBASIC1.64□□□□□ -2.15
HMGCS2P54868 U8.22-201ENST00000459141 133 ntBASIC1.64□□□□□ -2.15
HMGCS2P54868 AC022493.2-201ENST00000506122 481 ntBASIC1.64□□□□□ -2.15
HMGCS2P54868 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.64□□□□□ -2.15
HMGCS2P54868 RNU6-470P-201ENST00000515954 104 ntBASIC1.64□□□□□ -2.15
HMGCS2P54868 Y_RNA.675-201ENST00000516389 149 ntBASIC1.64□□□□□ -2.15
HMGCS2P54868 RNA5SP102-201ENST00000516865 106 ntBASIC1.64□□□□□ -2.15
HMGCS2P54868 AK6P2-201ENST00000549020 471 ntBASIC1.64□□□□□ -2.15
HMGCS2P54868 7SK.7-201ENST00000603504 247 ntBASIC1.64□□□□□ -2.15
HMGCS2P54868 SNRPGP20-201ENST00000604477 205 ntBASIC1.64□□□□□ -2.15
HMGCS2P54868 U1.36-201ENST00000620684 176 ntBASIC1.64□□□□□ -2.15
HMGCS2P54868 AC091895.1-201ENST00000624494 256 ntBASIC1.64□□□□□ -2.15
HMGCS2P54868 MTND5P16-201ENST00000460269 1703 ntBASIC1.63□□□□□ -2.15
HMGCS2P54868 Y_RNA.122-201ENST00000363331 96 ntBASIC1.63□□□□□ -2.15
HMGCS2P54868 Y_RNA.259-201ENST00000364619 101 ntBASIC1.63□□□□□ -2.15
HMGCS2P54868 RNU6-99P-201ENST00000364721 107 ntBASIC1.63□□□□□ -2.15
HMGCS2P54868 RNU6-245P-201ENST00000384020 107 ntBASIC1.63□□□□□ -2.15
HMGCS2P54868 RNU6-281P-201ENST00000384212 103 ntBASIC1.63□□□□□ -2.15
HMGCS2P54868 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
HMGCS2P54868 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.63□□□□□ -2.15
HMGCS2P54868 AC023790.1-201ENST00000482174 347 ntBASIC1.63□□□□□ -2.15
HMGCS2P54868 RPL36AP21-201ENST00000490372 323 ntBASIC1.63□□□□□ -2.15
HMGCS2P54868 RNU6-344P-201ENST00000516635 111 ntBASIC1.63□□□□□ -2.15
HMGCS2P54868 Y_RNA.706-201ENST00000516933 99 ntBASIC1.63□□□□□ -2.15
HMGCS2P54868 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.63□□□□□ -2.15
HMGCS2P54868 RRN3P3-201ENST00000549207 578 ntBASIC1.63□□□□□ -2.15
HMGCS2P54868 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.63□□□□□ -2.15
HMGCS2P54868 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.63□□□□□ -2.15
HMGCS2P54868 MIR4713-201ENST00000582691 75 ntBASIC1.63□□□□□ -2.15
HMGCS2P54868 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.63□□□□□ -2.15
HMGCS2P54868 MIR1244-1-201ENST00000612829 85 ntBASIC1.63□□□□□ -2.15
HMGCS2P54868 MIR1244-3-201ENST00000635744 85 ntBASIC1.63□□□□□ -2.15
HMGCS2P54868 MIR1244-2-201ENST00000636449 85 ntBASIC1.63□□□□□ -2.15
HMGCS2P54868 MIR1244-4-202ENST00000636813 85 ntBASIC1.63□□□□□ -2.15
HMGCS2P54868 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
HMGCS2P54868 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
HMGCS2P54868 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
HMGCS2P54868 LINC02555-201ENST00000563933 1951 ntBASIC1.62□□□□□ -2.15
HMGCS2P54868 U8.1-201ENST00000362843 134 ntBASIC1.62□□□□□ -2.15
HMGCS2P54868 Y_RNA.364-201ENST00000365532 101 ntBASIC1.62□□□□□ -2.15
HMGCS2P54868 Y_RNA.557-201ENST00000384680 107 ntBASIC1.62□□□□□ -2.15
HMGCS2P54868 MT-TD-201ENST00000387419 68 ntBASIC1.62□□□□□ -2.15
HMGCS2P54868 RNU6-700P-201ENST00000391043 107 ntBASIC1.62□□□□□ -2.15
HMGCS2P54868 EIF1P2-201ENST00000428233 350 ntBASIC1.62□□□□□ -2.15
HMGCS2P54868 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.62□□□□□ -2.15
HMGCS2P54868 RPL23AP50-201ENST00000434149 455 ntBASIC1.62□□□□□ -2.15
HMGCS2P54868 AC245517.4-201ENST00000448601 281 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms