Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC006001.4-201ENST00000622243 395 ntBASIC1.83□□□□□ -2.12
LIMK1P53667 RNU6-862P-201ENST00000362804 105 ntBASIC1.82□□□□□ -2.12
LIMK1P53667 Y_RNA.404-201ENST00000383978 102 ntBASIC1.82□□□□□ -2.12
LIMK1P53667 RNU6-793P-201ENST00000384233 104 ntBASIC1.82□□□□□ -2.12
LIMK1P53667 RNU6-1235P-201ENST00000384559 107 ntBASIC1.82□□□□□ -2.12
LIMK1P53667 AC007098.1-201ENST00000420122 367 ntBASIC1.82□□□□□ -2.12
LIMK1P53667 MTCYBP10-201ENST00000424905 650 ntBASIC1.82□□□□□ -2.12
LIMK1P53667 AC092423.1-201ENST00000430165 186 ntBASIC1.82□□□□□ -2.12
LIMK1P53667 MTND3P23-201ENST00000431980 347 ntBASIC1.82□□□□□ -2.12
LIMK1P53667 RNU7-95P-201ENST00000459222 64 ntBASIC1.82□□□□□ -2.12
LIMK1P53667 RNU6-498P-201ENST00000459468 107 ntBASIC1.82□□□□□ -2.12
LIMK1P53667 SCARNA16.2-201ENST00000516520 172 ntBASIC1.82□□□□□ -2.12
LIMK1P53667 RNA5SP384-201ENST00000516615 116 ntBASIC1.82□□□□□ -2.12
LIMK1P53667 RNU6-856P-201ENST00000516959 98 ntBASIC1.82□□□□□ -2.12
LIMK1P53667 RNU6-264P-201ENST00000517134 104 ntBASIC1.82□□□□□ -2.12
LIMK1P53667 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.82□□□□□ -2.12
LIMK1P53667 AC005014.2-201ENST00000607795 599 ntBASIC1.82□□□□□ -2.12
LIMK1P53667 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.82□□□□□ -2.12
LIMK1P53667 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
LIMK1P53667 MTND5P16-201ENST00000460269 1703 ntBASIC1.81□□□□□ -2.12
LIMK1P53667 Y_RNA.112-201ENST00000363250 102 ntBASIC1.81□□□□□ -2.12
LIMK1P53667 RNU1-96P-201ENST00000364163 162 ntBASIC1.81□□□□□ -2.12
LIMK1P53667 SNORD87-201ENST00000364849 89 ntBASIC1.81□□□□□ -2.12
LIMK1P53667 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.81□□□□□ -2.12
LIMK1P53667 Y_RNA.390-201ENST00000383932 102 ntBASIC1.81□□□□□ -2.12
LIMK1P53667 MIR190B-201ENST00000401119 79 ntBASIC1.81□□□□□ -2.12
LIMK1P53667 RNU2-7P-201ENST00000410794 178 ntBASIC1.81□□□□□ -2.12
LIMK1P53667 RNU6-370P-201ENST00000411008 104 ntBASIC1.81□□□□□ -2.12
LIMK1P53667 RNU6-1304P-201ENST00000411374 106 ntBASIC1.81□□□□□ -2.12
LIMK1P53667 AC060773.1-201ENST00000421698 310 ntBASIC1.81□□□□□ -2.12
LIMK1P53667 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.81□□□□□ -2.12
LIMK1P53667 AC003989.2-201ENST00000440224 169 ntBASIC1.81□□□□□ -2.12
LIMK1P53667 AC011406.1-201ENST00000512440 370 ntBASIC1.81□□□□□ -2.12
LIMK1P53667 Y_RNA.691-201ENST00000516611 103 ntBASIC1.81□□□□□ -2.12
LIMK1P53667 RNU6-107P-201ENST00000516643 102 ntBASIC1.81□□□□□ -2.12
LIMK1P53667 RNU6-1213P-201ENST00000517075 94 ntBASIC1.81□□□□□ -2.12
LIMK1P53667 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.81□□□□□ -2.12
LIMK1P53667 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.81□□□□□ -2.12
LIMK1P53667 AC010900.2-201ENST00000604508 210 ntBASIC1.81□□□□□ -2.12
LIMK1P53667 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.81□□□□□ -2.12
LIMK1P53667 AC010999.1-201ENST00000611856 324 ntBASIC1.81□□□□□ -2.12
LIMK1P53667 AL355073.2-201ENST00000612106 557 ntBASIC1.81□□□□□ -2.12
LIMK1P53667 AC092794.2-201ENST00000620933 563 ntBASIC1.81□□□□□ -2.12
LIMK1P53667 AC068205.3-201ENST00000636385 468 ntBASIC1.81□□□□□ -2.12
LIMK1P53667 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
LIMK1P53667 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
LIMK1P53667 RNU6-222P-201ENST00000362438 107 ntBASIC1.8□□□□□ -2.12
LIMK1P53667 Y_RNA.142-201ENST00000363491 102 ntBASIC1.8□□□□□ -2.12
LIMK1P53667 Y_RNA.327-201ENST00000365201 102 ntBASIC1.8□□□□□ -2.12
LIMK1P53667 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
LIMK1P53667 RNU6-1114P-201ENST00000516022 107 ntBASIC1.8□□□□□ -2.12
LIMK1P53667 RNU6-1146P-201ENST00000516282 102 ntBASIC1.8□□□□□ -2.12
LIMK1P53667 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.8□□□□□ -2.12
LIMK1P53667 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.8□□□□□ -2.12
LIMK1P53667 MIR502-201ENST00000606349 86 ntBASIC1.8□□□□□ -2.12
LIMK1P53667 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.8□□□□□ -2.12
LIMK1P53667 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.8□□□□□ -2.12
LIMK1P53667 AL669831.3-213ENST00000636676 183 ntBASIC1.8□□□□□ -2.12
LIMK1P53667 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.8□□□□□ -2.12
LIMK1P53667 AL391987.6-201ENST00000305671 199 ntBASIC1.79□□□□□ -2.12
LIMK1P53667 MIR126-201ENST00000362291 85 ntBASIC1.79□□□□□ -2.12
LIMK1P53667 SNORA72.1-201ENST00000363485 129 ntBASIC1.79□□□□□ -2.12
LIMK1P53667 Y_RNA.415-201ENST00000384012 112 ntBASIC1.79□□□□□ -2.12
LIMK1P53667 MIR10B-201ENST00000385011 110 ntBASIC1.79□□□□□ -2.12
LIMK1P53667 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
LIMK1P53667 RNU4-14P-201ENST00000410858 122 ntBASIC1.79□□□□□ -2.12
LIMK1P53667 AC004965.1-201ENST00000413033 213 ntBASIC1.79□□□□□ -2.12
LIMK1P53667 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.79□□□□□ -2.12
LIMK1P53667 HMGN2P34-201ENST00000437647 269 ntBASIC1.79□□□□□ -2.12
LIMK1P53667 AC091179.3-201ENST00000474761 144 ntBASIC1.79□□□□□ -2.12
LIMK1P53667 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.79□□□□□ -2.12
LIMK1P53667 AC090617.3-201ENST00000573670 475 ntBASIC1.79□□□□□ -2.12
LIMK1P53667 AC126177.8-201ENST00000618339 1015 ntBASIC1.79□□□□□ -2.12
LIMK1P53667 snoZ196.1-201ENST00000625269 89 ntBASIC1.79□□□□□ -2.12
LIMK1P53667 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.79□□□□□ -2.12
LIMK1P53667 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
LIMK1P53667 RNU6-879P-201ENST00000364328 108 ntBASIC1.78□□□□□ -2.12
LIMK1P53667 RNU6-1283P-201ENST00000365314 105 ntBASIC1.78□□□□□ -2.12
LIMK1P53667 Y_RNA.364-201ENST00000365532 101 ntBASIC1.78□□□□□ -2.12
LIMK1P53667 SNORA67.2-201ENST00000384300 149 ntBASIC1.78□□□□□ -2.12
LIMK1P53667 MIR548B-201ENST00000385247 97 ntBASIC1.78□□□□□ -2.12
LIMK1P53667 RNA5SP100-201ENST00000410903 110 ntBASIC1.78□□□□□ -2.12
LIMK1P53667 RNA5SP59-201ENST00000410922 110 ntBASIC1.78□□□□□ -2.12
LIMK1P53667 EBAG9P1-201ENST00000418955 543 ntBASIC1.78□□□□□ -2.12
LIMK1P53667 RPL30P15-201ENST00000457129 321 ntBASIC1.78□□□□□ -2.12
LIMK1P53667 RPL17P19-201ENST00000489069 552 ntBASIC1.78□□□□□ -2.12
LIMK1P53667 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.78□□□□□ -2.12
LIMK1P53667 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.78□□□□□ -2.12
LIMK1P53667 RNU6-559P-201ENST00000516151 98 ntBASIC1.78□□□□□ -2.12
LIMK1P53667 RNU6-970P-201ENST00000516312 107 ntBASIC1.78□□□□□ -2.12
LIMK1P53667 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.78□□□□□ -2.12
LIMK1P53667 AC093023.1-201ENST00000547375 507 ntBASIC1.78□□□□□ -2.12
LIMK1P53667 MIR5701-3-201ENST00000578890 82 ntBASIC1.78□□□□□ -2.12
LIMK1P53667 MIR5701-1-201ENST00000585138 82 ntBASIC1.78□□□□□ -2.12
LIMK1P53667 UBE2V2P2-201ENST00000587677 504 ntBASIC1.78□□□□□ -2.12
LIMK1P53667 MZT1P2-201ENST00000604387 248 ntBASIC1.78□□□□□ -2.12
LIMK1P53667 AC069114.2-201ENST00000604699 304 ntBASIC1.78□□□□□ -2.12
LIMK1P53667 AC113139.1-201ENST00000605049 239 ntBASIC1.78□□□□□ -2.12
LIMK1P53667 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.78□□□□□ -2.12
LIMK1P53667 MIR5701-2-201ENST00000615634 82 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 726.7 ms