Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 MIR376A1-201ENST00000616574 68 ntBASIC2.53□□□□□ -2
COPAP53621 7SK.10-201ENST00000621414 298 ntBASIC2.53□□□□□ -2
COPAP53621 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.53□□□□□ -2
COPAP53621 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.53□□□□□ -2
COPAP53621 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
COPAP53621 RNU1-148P-201ENST00000384472 162 ntBASIC2.52□□□□□ -2.01
COPAP53621 MIR144-201ENST00000384886 86 ntBASIC2.52□□□□□ -2.01
COPAP53621 CR769767.1-201ENST00000436337 346 ntBASIC2.52□□□□□ -2.01
COPAP53621 AL137159.1-201ENST00000452808 512 ntBASIC2.52□□□□□ -2.01
COPAP53621 PRELID3BP1-201ENST00000457142 540 ntBASIC2.52□□□□□ -2.01
COPAP53621 RPL26P26-201ENST00000480251 434 ntBASIC2.52□□□□□ -2.01
COPAP53621 AC093259.1-201ENST00000509755 300 ntBASIC2.52□□□□□ -2.01
COPAP53621 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.52□□□□□ -2.01
COPAP53621 NDUFA5P6-201ENST00000542110 379 ntBASIC2.52□□□□□ -2.01
COPAP53621 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.52□□□□□ -2.01
COPAP53621 AL137847.3-201ENST00000611521 109 ntBASIC2.52□□□□□ -2.01
COPAP53621 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.52□□□□□ -2.01
COPAP53621 LINC02555-201ENST00000563933 1951 ntBASIC2.52□□□□□ -2.01
COPAP53621 ZNF658B-202ENST00000615961 3375 ntBASIC2.52□□□□□ -2.01
COPAP53621 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
COPAP53621 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
COPAP53621 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
COPAP53621 RNU6-626P-201ENST00000363354 107 ntBASIC2.51□□□□□ -2.01
COPAP53621 RNU6-961P-201ENST00000363893 105 ntBASIC2.51□□□□□ -2.01
COPAP53621 MIR586-201ENST00000385035 97 ntBASIC2.51□□□□□ -2.01
COPAP53621 AL359511.1-201ENST00000402970 211 ntBASIC2.51□□□□□ -2.01
COPAP53621 AC005002.2-201ENST00000438228 269 ntBASIC2.51□□□□□ -2.01
COPAP53621 AC074290.1-201ENST00000448883 135 ntBASIC2.51□□□□□ -2.01
COPAP53621 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.51□□□□□ -2.01
COPAP53621 AC114982.1-201ENST00000469402 321 ntBASIC2.51□□□□□ -2.01
COPAP53621 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.51□□□□□ -2.01
COPAP53621 RNU7-193P-201ENST00000516723 65 ntBASIC2.51□□□□□ -2.01
COPAP53621 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.51□□□□□ -2.01
COPAP53621 AL161670.1-201ENST00000554348 137 ntBASIC2.51□□□□□ -2.01
COPAP53621 MIR3126-201ENST00000577443 74 ntBASIC2.51□□□□□ -2.01
COPAP53621 U6.104-201ENST00000637979 90 ntBASIC2.51□□□□□ -2.01
COPAP53621 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
COPAP53621 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.5□□□□□ -2.01
COPAP53621 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.5□□□□□ -2.01
COPAP53621 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
COPAP53621 Y_RNA.64-201ENST00000362845 102 ntBASIC2.5□□□□□ -2.01
COPAP53621 SNORA72.2-201ENST00000365028 127 ntBASIC2.5□□□□□ -2.01
COPAP53621 RNU6-20P-201ENST00000384106 107 ntBASIC2.5□□□□□ -2.01
COPAP53621 RNU6-1310P-201ENST00000384153 107 ntBASIC2.5□□□□□ -2.01
COPAP53621 Y_RNA.462-201ENST00000384268 102 ntBASIC2.5□□□□□ -2.01
COPAP53621 SNORA67.2-201ENST00000384300 149 ntBASIC2.5□□□□□ -2.01
COPAP53621 RNU6-937P-201ENST00000384325 106 ntBASIC2.5□□□□□ -2.01
COPAP53621 MIR568-201ENST00000385036 95 ntBASIC2.5□□□□□ -2.01
COPAP53621 RNA5SP504-201ENST00000410676 117 ntBASIC2.5□□□□□ -2.01
COPAP53621 RNU5A-5P-201ENST00000411054 116 ntBASIC2.5□□□□□ -2.01
COPAP53621 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.5□□□□□ -2.01
COPAP53621 AL121890.1-201ENST00000435457 205 ntBASIC2.5□□□□□ -2.01
COPAP53621 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.5□□□□□ -2.01
COPAP53621 AC016925.1-201ENST00000458303 298 ntBASIC2.5□□□□□ -2.01
COPAP53621 LINC01399-202ENST00000458450 244 ntBASIC2.5□□□□□ -2.01
COPAP53621 HMGN2P9-201ENST00000476875 229 ntBASIC2.5□□□□□ -2.01
COPAP53621 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.5□□□□□ -2.01
COPAP53621 AP003733.2-201ENST00000529409 171 ntBASIC2.5□□□□□ -2.01
COPAP53621 MIR4300-201ENST00000581016 96 ntBASIC2.5□□□□□ -2.01
COPAP53621 AC005176.2-201ENST00000596933 147 ntBASIC2.5□□□□□ -2.01
COPAP53621 AC008873.1-201ENST00000625051 138 ntBASIC2.5□□□□□ -2.01
COPAP53621 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
COPAP53621 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.5□□□□□ -2.01
COPAP53621 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.5□□□□□ -2.01
COPAP53621 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.49□□□□□ -2.01
COPAP53621 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
COPAP53621 U3.8-201ENST00000363675 217 ntBASIC2.49□□□□□ -2.01
COPAP53621 Y_RNA.230-201ENST00000364348 109 ntBASIC2.49□□□□□ -2.01
COPAP53621 RNU6-806P-201ENST00000365147 105 ntBASIC2.49□□□□□ -2.01
COPAP53621 RNU6-1264P-201ENST00000383891 107 ntBASIC2.49□□□□□ -2.01
COPAP53621 SNORD63-201ENST00000384262 68 ntBASIC2.49□□□□□ -2.01
COPAP53621 Y_RNA.512-201ENST00000384518 102 ntBASIC2.49□□□□□ -2.01
COPAP53621 Y_RNA.556-201ENST00000384677 113 ntBASIC2.49□□□□□ -2.01
COPAP53621 RNU2-20P-201ENST00000410425 191 ntBASIC2.49□□□□□ -2.01
COPAP53621 RNA5SP475-201ENST00000410568 110 ntBASIC2.49□□□□□ -2.01
COPAP53621 RNU4-53P-201ENST00000410828 140 ntBASIC2.49□□□□□ -2.01
COPAP53621 ELOCP21-201ENST00000412558 336 ntBASIC2.49□□□□□ -2.01
COPAP53621 SRIP3-201ENST00000413200 219 ntBASIC2.49□□□□□ -2.01
COPAP53621 AL390729.2-201ENST00000416137 156 ntBASIC2.49□□□□□ -2.01
COPAP53621 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.49□□□□□ -2.01
COPAP53621 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.49□□□□□ -2.01
COPAP53621 RAB28P5-201ENST00000427490 651 ntBASIC2.49□□□□□ -2.01
COPAP53621 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.49□□□□□ -2.01
COPAP53621 RN7SL636P-201ENST00000497504 294 ntBASIC2.49□□□□□ -2.01
COPAP53621 AK6P2-201ENST00000549020 471 ntBASIC2.49□□□□□ -2.01
COPAP53621 AC136932.1-201ENST00000574771 208 ntBASIC2.49□□□□□ -2.01
COPAP53621 AC026271.5-201ENST00000577873 130 ntBASIC2.49□□□□□ -2.01
COPAP53621 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.49□□□□□ -2.01
COPAP53621 AP000942.4-201ENST00000604811 241 ntBASIC2.49□□□□□ -2.01
COPAP53621 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.49□□□□□ -2.01
COPAP53621 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.49□□□□□ -2.01
COPAP53621 MIR8062-201ENST00000621515 85 ntBASIC2.49□□□□□ -2.01
COPAP53621 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
COPAP53621 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.48□□□□□ -2.01
COPAP53621 RNA5SP456-201ENST00000364002 114 ntBASIC2.48□□□□□ -2.01
COPAP53621 Y_RNA.222-201ENST00000364264 102 ntBASIC2.48□□□□□ -2.01
COPAP53621 SNORD115-46-201ENST00000390982 71 ntBASIC2.48□□□□□ -2.01
COPAP53621 MIR1302-6-201ENST00000408466 90 ntBASIC2.48□□□□□ -2.01
COPAP53621 Z98742.3-201ENST00000418637 326 ntBASIC2.48□□□□□ -2.01
COPAP53621 AC123900.1-201ENST00000420390 96 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms