Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 SDAD1P3-201ENST00000427380 333 ntBASIC2.12□□□□□ -2.07
CLCNKAP51800 RPEP5-201ENST00000441137 268 ntBASIC2.12□□□□□ -2.07
CLCNKAP51800 AC007395.1-201ENST00000451333 677 ntBASIC2.12□□□□□ -2.07
CLCNKAP51800 U8.20-201ENST00000459445 131 ntBASIC2.12□□□□□ -2.07
CLCNKAP51800 AC055731.1-201ENST00000474387 401 ntBASIC2.12□□□□□ -2.07
CLCNKAP51800 HMGN2P9-201ENST00000476875 229 ntBASIC2.12□□□□□ -2.07
CLCNKAP51800 RNU6-397P-201ENST00000516226 104 ntBASIC2.12□□□□□ -2.07
CLCNKAP51800 MIR514B-201ENST00000516774 80 ntBASIC2.12□□□□□ -2.07
CLCNKAP51800 RNA5SP137-201ENST00000516833 135 ntBASIC2.12□□□□□ -2.07
CLCNKAP51800 IGKV3-31-201ENST00000523109 329 ntBASIC2.12□□□□□ -2.07
CLCNKAP51800 AK6P2-201ENST00000549020 471 ntBASIC2.12□□□□□ -2.07
CLCNKAP51800 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.12□□□□□ -2.07
CLCNKAP51800 AC022202.1-201ENST00000613515 211 ntBASIC2.12□□□□□ -2.07
CLCNKAP51800 AC240442.1-201ENST00000616055 283 ntBASIC2.12□□□□□ -2.07
CLCNKAP51800 SDR42E1P4-201ENST00000620894 481 ntBASIC2.12□□□□□ -2.07
CLCNKAP51800 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.12□□□□□ -2.07
CLCNKAP51800 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CLCNKAP51800 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CLCNKAP51800 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CLCNKAP51800 SNORD31B-201ENST00000364977 69 ntBASIC2.11□□□□□ -2.07
CLCNKAP51800 Y_RNA.458-201ENST00000384240 102 ntBASIC2.11□□□□□ -2.07
CLCNKAP51800 RNU6-611P-201ENST00000384276 104 ntBASIC2.11□□□□□ -2.07
CLCNKAP51800 AL357139.1-201ENST00000407792 426 ntBASIC2.11□□□□□ -2.07
CLCNKAP51800 MIR1283-1-201ENST00000408494 87 ntBASIC2.11□□□□□ -2.07
CLCNKAP51800 U3.40-201ENST00000408706 208 ntBASIC2.11□□□□□ -2.07
CLCNKAP51800 MIR1252-201ENST00000408861 65 ntBASIC2.11□□□□□ -2.07
CLCNKAP51800 FCF1P4-201ENST00000448326 183 ntBASIC2.11□□□□□ -2.07
CLCNKAP51800 PRELID3BP1-201ENST00000457142 540 ntBASIC2.11□□□□□ -2.07
CLCNKAP51800 MTATP8P1-201ENST00000467115 207 ntBASIC2.11□□□□□ -2.07
CLCNKAP51800 RPL26P26-201ENST00000480251 434 ntBASIC2.11□□□□□ -2.07
CLCNKAP51800 AC093259.1-201ENST00000509755 300 ntBASIC2.11□□□□□ -2.07
CLCNKAP51800 RNU6-1046P-201ENST00000516538 107 ntBASIC2.11□□□□□ -2.07
CLCNKAP51800 Y_RNA.720-201ENST00000517166 92 ntBASIC2.11□□□□□ -2.07
CLCNKAP51800 AC008737.2-201ENST00000599446 118 ntBASIC2.11□□□□□ -2.07
CLCNKAP51800 RAC1P9-201ENST00000604990 392 ntBASIC2.11□□□□□ -2.07
CLCNKAP51800 AL021879.1-201ENST00000611756 288 ntBASIC2.11□□□□□ -2.07
CLCNKAP51800 AL078596.1-201ENST00000624856 447 ntBASIC2.11□□□□□ -2.07
CLCNKAP51800 AC008873.1-201ENST00000625051 138 ntBASIC2.11□□□□□ -2.07
CLCNKAP51800 AC068205.3-201ENST00000636385 468 ntBASIC2.11□□□□□ -2.07
CLCNKAP51800 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CLCNKAP51800 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.11□□□□□ -2.07
CLCNKAP51800 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.1□□□□□ -2.07
CLCNKAP51800 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
CLCNKAP51800 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.1□□□□□ -2.07
CLCNKAP51800 MIRLET7G-201ENST00000362280 84 ntBASIC2.1□□□□□ -2.07
CLCNKAP51800 RNU6-961P-201ENST00000363893 105 ntBASIC2.1□□□□□ -2.07
CLCNKAP51800 SNORA64-201ENST00000384674 134 ntBASIC2.1□□□□□ -2.07
CLCNKAP51800 AL079342.1-201ENST00000401460 267 ntBASIC2.1□□□□□ -2.07
CLCNKAP51800 ELOCP21-201ENST00000412558 336 ntBASIC2.1□□□□□ -2.07
CLCNKAP51800 AL121890.1-201ENST00000435457 205 ntBASIC2.1□□□□□ -2.07
CLCNKAP51800 PCNPP5-201ENST00000452246 481 ntBASIC2.1□□□□□ -2.07
CLCNKAP51800 AC016925.1-201ENST00000458303 298 ntBASIC2.1□□□□□ -2.07
CLCNKAP51800 AC067942.3-201ENST00000512025 362 ntBASIC2.1□□□□□ -2.07
CLCNKAP51800 RNU6-408P-201ENST00000515910 100 ntBASIC2.1□□□□□ -2.07
CLCNKAP51800 RNU6-107P-201ENST00000516643 102 ntBASIC2.1□□□□□ -2.07
CLCNKAP51800 AC131281.1-201ENST00000522984 164 ntBASIC2.1□□□□□ -2.07
CLCNKAP51800 NDUFA5P6-201ENST00000542110 379 ntBASIC2.1□□□□□ -2.07
CLCNKAP51800 AL121655.1-201ENST00000605811 308 ntBASIC2.1□□□□□ -2.07
CLCNKAP51800 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.1□□□□□ -2.07
CLCNKAP51800 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CLCNKAP51800 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.09□□□□□ -2.07
CLCNKAP51800 Y_RNA.145-201ENST00000363527 102 ntBASIC2.09□□□□□ -2.07
CLCNKAP51800 Y_RNA.210-201ENST00000364161 110 ntBASIC2.09□□□□□ -2.07
CLCNKAP51800 RNU6-438P-201ENST00000365561 103 ntBASIC2.09□□□□□ -2.07
CLCNKAP51800 SNORA67.3-201ENST00000384366 140 ntBASIC2.09□□□□□ -2.07
CLCNKAP51800 Y_RNA.551-201ENST00000384661 102 ntBASIC2.09□□□□□ -2.07
CLCNKAP51800 MIR586-201ENST00000385035 97 ntBASIC2.09□□□□□ -2.07
CLCNKAP51800 MIR1262-201ENST00000408276 93 ntBASIC2.09□□□□□ -2.07
CLCNKAP51800 HMGN2P38-201ENST00000423806 265 ntBASIC2.09□□□□□ -2.07
CLCNKAP51800 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.09□□□□□ -2.07
CLCNKAP51800 AL137159.1-201ENST00000452808 512 ntBASIC2.09□□□□□ -2.07
CLCNKAP51800 snoU13.15-201ENST00000459407 104 ntBASIC2.09□□□□□ -2.07
CLCNKAP51800 AC010655.3-201ENST00000478818 450 ntBASIC2.09□□□□□ -2.07
CLCNKAP51800 AC018448.1-201ENST00000552843 316 ntBASIC2.09□□□□□ -2.07
CLCNKAP51800 AC233702.2-202ENST00000562547 291 ntBASIC2.09□□□□□ -2.07
CLCNKAP51800 MIR4753-201ENST00000585119 83 ntBASIC2.09□□□□□ -2.07
CLCNKAP51800 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.09□□□□□ -2.07
CLCNKAP51800 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.09□□□□□ -2.07
CLCNKAP51800 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
CLCNKAP51800 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.09□□□□□ -2.08
CLCNKAP51800 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.08□□□□□ -2.08
CLCNKAP51800 RNA5SP37-201ENST00000365420 130 ntBASIC2.08□□□□□ -2.08
CLCNKAP51800 Y_RNA.380-201ENST00000365663 111 ntBASIC2.08□□□□□ -2.08
CLCNKAP51800 Y_RNA.459-201ENST00000384251 102 ntBASIC2.08□□□□□ -2.08
CLCNKAP51800 MIR548B-201ENST00000385247 97 ntBASIC2.08□□□□□ -2.08
CLCNKAP51800 MIR300-201ENST00000401138 83 ntBASIC2.08□□□□□ -2.08
CLCNKAP51800 AL023284.1-201ENST00000403956 276 ntBASIC2.08□□□□□ -2.08
CLCNKAP51800 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
CLCNKAP51800 AC016717.1-201ENST00000448918 286 ntBASIC2.08□□□□□ -2.08
CLCNKAP51800 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.08□□□□□ -2.08
CLCNKAP51800 RNU6-625P-201ENST00000459412 107 ntBASIC2.08□□□□□ -2.08
CLCNKAP51800 AC090255.1-201ENST00000495779 349 ntBASIC2.08□□□□□ -2.08
CLCNKAP51800 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.08□□□□□ -2.08
CLCNKAP51800 AP002001.1-203ENST00000534002 267 ntBASIC2.08□□□□□ -2.08
CLCNKAP51800 AC055872.1-201ENST00000570978 278 ntBASIC2.08□□□□□ -2.08
CLCNKAP51800 AC026271.5-201ENST00000577873 130 ntBASIC2.08□□□□□ -2.08
CLCNKAP51800 MIR4287-201ENST00000579398 78 ntBASIC2.08□□□□□ -2.08
CLCNKAP51800 AC136443.5-201ENST00000603741 370 ntBASIC2.08□□□□□ -2.08
CLCNKAP51800 AC010205.1-201ENST00000616668 449 ntBASIC2.08□□□□□ -2.08
CLCNKAP51800 Y_RNA.332-201ENST00000365271 113 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms