Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 AL078604.3-201ENST00000615580 211 ntBASIC2.75□□□□□ -1.97
CLK3P49761 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.75□□□□□ -1.97
CLK3P49761 Y_RNA.778-201ENST00000620203 90 ntBASIC2.75□□□□□ -1.97
CLK3P49761 AL035425.3-201ENST00000564206 4996 ntBASIC2.75□□□□□ -1.97
CLK3P49761 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CLK3P49761 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.75□□□□□ -1.97
CLK3P49761 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
CLK3P49761 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CLK3P49761 AC138915.1-201ENST00000565427 1685 ntBASIC2.74□□□□□ -1.97
CLK3P49761 RNU6-275P-201ENST00000364910 107 ntBASIC2.74□□□□□ -1.97
CLK3P49761 Y_RNA.329-201ENST00000365209 107 ntBASIC2.74□□□□□ -1.97
CLK3P49761 SNORA9.2-201ENST00000365361 133 ntBASIC2.74□□□□□ -1.97
CLK3P49761 SNORA70.4-201ENST00000365509 134 ntBASIC2.74□□□□□ -1.97
CLK3P49761 MIR186-201ENST00000384988 86 ntBASIC2.74□□□□□ -1.97
CLK3P49761 MIR549A-201ENST00000385268 96 ntBASIC2.74□□□□□ -1.97
CLK3P49761 RNU6-239P-201ENST00000390990 99 ntBASIC2.74□□□□□ -1.97
CLK3P49761 MIR208B-201ENST00000401172 77 ntBASIC2.74□□□□□ -1.97
CLK3P49761 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.74□□□□□ -1.97
CLK3P49761 Y_RNA.629-201ENST00000411368 105 ntBASIC2.74□□□□□ -1.97
CLK3P49761 AL513477.1-202ENST00000417061 214 ntBASIC2.74□□□□□ -1.97
CLK3P49761 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.74□□□□□ -1.97
CLK3P49761 RPS29P2-201ENST00000479278 136 ntBASIC2.74□□□□□ -1.97
CLK3P49761 AC010409.1-201ENST00000487382 476 ntBASIC2.74□□□□□ -1.97
CLK3P49761 SCGB1D5P-201ENST00000515134 247 ntBASIC2.74□□□□□ -1.97
CLK3P49761 RNU6-436P-201ENST00000516171 114 ntBASIC2.74□□□□□ -1.97
CLK3P49761 RNA5SP341-201ENST00000516261 117 ntBASIC2.74□□□□□ -1.97
CLK3P49761 RNU2-12P-201ENST00000517216 168 ntBASIC2.74□□□□□ -1.97
CLK3P49761 AC100767.1-201ENST00000528178 123 ntBASIC2.74□□□□□ -1.97
CLK3P49761 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.74□□□□□ -1.97
CLK3P49761 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.74□□□□□ -1.97
CLK3P49761 SNORD98-201ENST00000636377 67 ntBASIC2.74□□□□□ -1.97
CLK3P49761 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.74□□□□□ -1.97
CLK3P49761 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CLK3P49761 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.73□□□□□ -1.97
CLK3P49761 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.73□□□□□ -1.97
CLK3P49761 MIR208A-201ENST00000362287 71 ntBASIC2.73□□□□□ -1.97
CLK3P49761 RNU6-727P-201ENST00000363592 107 ntBASIC2.73□□□□□ -1.97
CLK3P49761 RNA5SP387-201ENST00000364226 106 ntBASIC2.73□□□□□ -1.97
CLK3P49761 RNU6-1264P-201ENST00000383891 107 ntBASIC2.73□□□□□ -1.97
CLK3P49761 MIR181A2-201ENST00000384863 110 ntBASIC2.73□□□□□ -1.97
CLK3P49761 MIR491-201ENST00000384877 84 ntBASIC2.73□□□□□ -1.97
CLK3P49761 SNORA11.1-201ENST00000408133 129 ntBASIC2.73□□□□□ -1.97
CLK3P49761 U3.40-201ENST00000408706 208 ntBASIC2.73□□□□□ -1.97
CLK3P49761 EBAG9P1-201ENST00000418955 543 ntBASIC2.73□□□□□ -1.97
CLK3P49761 RPS20P10-201ENST00000451209 253 ntBASIC2.73□□□□□ -1.97
CLK3P49761 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.73□□□□□ -1.97
CLK3P49761 snoU13.22-201ENST00000459428 104 ntBASIC2.73□□□□□ -1.97
CLK3P49761 AC112771.1-201ENST00000463581 102 ntBASIC2.73□□□□□ -1.97
CLK3P49761 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.73□□□□□ -1.97
CLK3P49761 AIG1P1-201ENST00000503376 148 ntBASIC2.73□□□□□ -1.97
CLK3P49761 AC083906.5-201ENST00000503722 328 ntBASIC2.73□□□□□ -1.97
CLK3P49761 RNA5SP112-201ENST00000515937 99 ntBASIC2.73□□□□□ -1.97
CLK3P49761 RNU6-426P-201ENST00000516464 97 ntBASIC2.73□□□□□ -1.97
CLK3P49761 RNU7-121P-201ENST00000516604 62 ntBASIC2.73□□□□□ -1.97
CLK3P49761 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.73□□□□□ -1.97
CLK3P49761 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.73□□□□□ -1.97
CLK3P49761 MIR3923-201ENST00000579521 83 ntBASIC2.73□□□□□ -1.97
CLK3P49761 MIR4325-201ENST00000583049 90 ntBASIC2.73□□□□□ -1.97
CLK3P49761 AL365222.1-201ENST00000614661 98 ntBASIC2.73□□□□□ -1.97
CLK3P49761 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
CLK3P49761 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
CLK3P49761 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.72□□□□□ -1.97
CLK3P49761 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
CLK3P49761 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CLK3P49761 RNU6-1010P-201ENST00000362757 107 ntBASIC2.72□□□□□ -1.97
CLK3P49761 RNU6-151P-201ENST00000364158 107 ntBASIC2.72□□□□□ -1.97
CLK3P49761 SNORD56.5-201ENST00000364281 72 ntBASIC2.72□□□□□ -1.97
CLK3P49761 MIR569-201ENST00000385228 96 ntBASIC2.72□□□□□ -1.97
CLK3P49761 RNU6-763P-201ENST00000390865 106 ntBASIC2.72□□□□□ -1.97
CLK3P49761 RNU6-381P-201ENST00000391259 108 ntBASIC2.72□□□□□ -1.97
CLK3P49761 FO393413.1-201ENST00000402892 195 ntBASIC2.72□□□□□ -1.97
CLK3P49761 RNU6-257P-201ENST00000410238 98 ntBASIC2.72□□□□□ -1.97
CLK3P49761 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.72□□□□□ -1.97
CLK3P49761 AC097463.2-201ENST00000421074 142 ntBASIC2.72□□□□□ -1.97
CLK3P49761 CR769767.1-201ENST00000436337 346 ntBASIC2.72□□□□□ -1.97
CLK3P49761 AC008267.6-201ENST00000441664 139 ntBASIC2.72□□□□□ -1.97
CLK3P49761 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.72□□□□□ -1.97
CLK3P49761 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.72□□□□□ -1.97
CLK3P49761 Y_RNA.797-201ENST00000515977 94 ntBASIC2.72□□□□□ -1.97
CLK3P49761 RN7SKP164-201ENST00000516138 266 ntBASIC2.72□□□□□ -1.97
CLK3P49761 AC004486.1-201ENST00000546846 233 ntBASIC2.72□□□□□ -1.97
CLK3P49761 AC079598.5-201ENST00000547460 117 ntBASIC2.72□□□□□ -1.97
CLK3P49761 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.72□□□□□ -1.97
CLK3P49761 AC010329.5-201ENST00000623497 2174 ntBASIC2.72□□□□□ -1.97
CLK3P49761 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.72□□□□□ -1.97
CLK3P49761 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.72□□□□□ -1.97
CLK3P49761 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CLK3P49761 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CLK3P49761 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.97
CLK3P49761 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.97
CLK3P49761 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.71□□□□□ -1.97
CLK3P49761 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CLK3P49761 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
CLK3P49761 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
CLK3P49761 Z82195.2-201ENST00000612348 18351 ntBASIC2.71□□□□□ -1.98
CLK3P49761 RNU6-486P-201ENST00000363116 107 ntBASIC2.71□□□□□ -1.98
CLK3P49761 RNU6-103P-201ENST00000363686 107 ntBASIC2.71□□□□□ -1.98
CLK3P49761 RNU6-324P-201ENST00000363957 106 ntBASIC2.71□□□□□ -1.98
CLK3P49761 CBX3P9-201ENST00000402326 552 ntBASIC2.71□□□□□ -1.98
CLK3P49761 MICF-203ENST00000432679 129 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms