Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.06□□□□□ -2.24
CSNK1A1P48729 RPL30P16-201ENST00000419341 429 ntBASIC1.06□□□□□ -2.24
CSNK1A1P48729 AL606517.2-201ENST00000442855 241 ntBASIC1.06□□□□□ -2.24
CSNK1A1P48729 RPS27P1-201ENST00000450552 247 ntBASIC1.06□□□□□ -2.24
CSNK1A1P48729 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.06□□□□□ -2.24
CSNK1A1P48729 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.05□□□□□ -2.24
CSNK1A1P48729 AL391987.6-201ENST00000305671 199 ntBASIC1.05□□□□□ -2.24
CSNK1A1P48729 RNU6-727P-201ENST00000363592 107 ntBASIC1.05□□□□□ -2.24
CSNK1A1P48729 RNU6-1059P-201ENST00000363752 98 ntBASIC1.05□□□□□ -2.24
CSNK1A1P48729 Y_RNA.295-201ENST00000364918 102 ntBASIC1.05□□□□□ -2.24
CSNK1A1P48729 Y_RNA.301-201ENST00000364990 103 ntBASIC1.05□□□□□ -2.24
CSNK1A1P48729 RNU6-1240P-201ENST00000365155 104 ntBASIC1.05□□□□□ -2.24
CSNK1A1P48729 RNU6-596P-201ENST00000365395 98 ntBASIC1.05□□□□□ -2.24
CSNK1A1P48729 Y_RNA.415-201ENST00000384012 112 ntBASIC1.05□□□□□ -2.24
CSNK1A1P48729 MIR1185-2-201ENST00000408687 86 ntBASIC1.05□□□□□ -2.24
CSNK1A1P48729 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.05□□□□□ -2.24
CSNK1A1P48729 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.05□□□□□ -2.24
CSNK1A1P48729 AC091179.3-201ENST00000474761 144 ntBASIC1.05□□□□□ -2.24
CSNK1A1P48729 HMGN1P12-201ENST00000499125 195 ntBASIC1.05□□□□□ -2.24
CSNK1A1P48729 AC103851.1-201ENST00000506833 274 ntBASIC1.05□□□□□ -2.24
CSNK1A1P48729 RNU6-566P-201ENST00000516790 107 ntBASIC1.05□□□□□ -2.24
CSNK1A1P48729 RNA5SP454-201ENST00000517231 127 ntBASIC1.05□□□□□ -2.24
CSNK1A1P48729 AC024995.1-201ENST00000523014 93 ntBASIC1.05□□□□□ -2.24
CSNK1A1P48729 AL442163.3-201ENST00000554110 156 ntBASIC1.05□□□□□ -2.24
CSNK1A1P48729 FRG2DP-202ENST00000566967 323 ntBASIC1.05□□□□□ -2.24
CSNK1A1P48729 AL050343.2-201ENST00000607338 280 ntBASIC1.05□□□□□ -2.24
CSNK1A1P48729 MIR6078-201ENST00000611069 100 ntBASIC1.05□□□□□ -2.24
CSNK1A1P48729 MIR3688-2-201ENST00000636963 87 ntBASIC1.05□□□□□ -2.24
CSNK1A1P48729 U3.8-201ENST00000363675 217 ntBASIC1.04□□□□□ -2.24
CSNK1A1P48729 RNU6-842P-201ENST00000384269 107 ntBASIC1.04□□□□□ -2.24
CSNK1A1P48729 RNU6-541P-201ENST00000384709 110 ntBASIC1.04□□□□□ -2.24
CSNK1A1P48729 MIR515-2-201ENST00000384883 83 ntBASIC1.04□□□□□ -2.24
CSNK1A1P48729 MIR515-1-201ENST00000384884 83 ntBASIC1.04□□□□□ -2.24
CSNK1A1P48729 SNORD115-47-201ENST00000391226 86 ntBASIC1.04□□□□□ -2.24
CSNK1A1P48729 RPL21P1-201ENST00000399532 476 ntBASIC1.04□□□□□ -2.24
CSNK1A1P48729 FGF7P8-201ENST00000402994 292 ntBASIC1.04□□□□□ -2.24
CSNK1A1P48729 COX6CP10-201ENST00000416832 224 ntBASIC1.04□□□□□ -2.24
CSNK1A1P48729 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.04□□□□□ -2.24
CSNK1A1P48729 USP9YP30-201ENST00000430729 455 ntBASIC1.04□□□□□ -2.24
CSNK1A1P48729 TOMM22P2-201ENST00000430735 237 ntBASIC1.04□□□□□ -2.24
CSNK1A1P48729 NDUFB4P10-201ENST00000452541 359 ntBASIC1.04□□□□□ -2.24
CSNK1A1P48729 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.04□□□□□ -2.24
CSNK1A1P48729 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.04□□□□□ -2.24
CSNK1A1P48729 AC090517.2-201ENST00000614966 680 ntBASIC1.04□□□□□ -2.24
CSNK1A1P48729 U4.5-201ENST00000617137 123 ntBASIC1.04□□□□□ -2.24
CSNK1A1P48729 MIR3662-201ENST00000637030 95 ntBASIC1.04□□□□□ -2.24
CSNK1A1P48729 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
CSNK1A1P48729 Y_RNA.157-201ENST00000363638 102 ntBASIC1.03□□□□□ -2.24
CSNK1A1P48729 RNU6-595P-201ENST00000363944 107 ntBASIC1.03□□□□□ -2.24
CSNK1A1P48729 Y_RNA.405-201ENST00000383979 100 ntBASIC1.03□□□□□ -2.24
CSNK1A1P48729 Y_RNA.451-201ENST00000384200 100 ntBASIC1.03□□□□□ -2.24
CSNK1A1P48729 Y_RNA.453-201ENST00000384223 109 ntBASIC1.03□□□□□ -2.24
CSNK1A1P48729 Y_RNA.524-201ENST00000384564 100 ntBASIC1.03□□□□□ -2.24
CSNK1A1P48729 Y_RNA.561-201ENST00000384694 100 ntBASIC1.03□□□□□ -2.24
CSNK1A1P48729 MIR10B-201ENST00000385011 110 ntBASIC1.03□□□□□ -2.24
CSNK1A1P48729 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
CSNK1A1P48729 RNA5SP323-201ENST00000391094 133 ntBASIC1.03□□□□□ -2.24
CSNK1A1P48729 MIR548F1-201ENST00000408667 84 ntBASIC1.03□□□□□ -2.24
CSNK1A1P48729 RNA5SP118-201ENST00000410385 109 ntBASIC1.03□□□□□ -2.24
CSNK1A1P48729 AC008134.1-201ENST00000420943 193 ntBASIC1.03□□□□□ -2.24
CSNK1A1P48729 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.03□□□□□ -2.24
CSNK1A1P48729 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.03□□□□□ -2.24
CSNK1A1P48729 AC005002.2-201ENST00000438228 269 ntBASIC1.03□□□□□ -2.24
CSNK1A1P48729 MTND1P17-201ENST00000448961 204 ntBASIC1.03□□□□□ -2.24
CSNK1A1P48729 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.03□□□□□ -2.24
CSNK1A1P48729 AP000870.1-201ENST00000472927 406 ntBASIC1.03□□□□□ -2.24
CSNK1A1P48729 AL163540.1-201ENST00000485382 386 ntBASIC1.03□□□□□ -2.24
CSNK1A1P48729 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.03□□□□□ -2.24
CSNK1A1P48729 SNORA31.10-201ENST00000516482 106 ntBASIC1.03□□□□□ -2.24
CSNK1A1P48729 RNU7-128P-201ENST00000517247 62 ntBASIC1.03□□□□□ -2.24
CSNK1A1P48729 MIR4709-201ENST00000577272 72 ntBASIC1.03□□□□□ -2.24
CSNK1A1P48729 MIR4273-201ENST00000582824 84 ntBASIC1.03□□□□□ -2.24
CSNK1A1P48729 AL929325.1-201ENST00000603096 117 ntBASIC1.03□□□□□ -2.24
CSNK1A1P48729 MZT1P2-201ENST00000604387 248 ntBASIC1.03□□□□□ -2.24
CSNK1A1P48729 AC022217.4-201ENST00000604389 163 ntBASIC1.03□□□□□ -2.24
CSNK1A1P48729 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.03□□□□□ -2.24
CSNK1A1P48729 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.03□□□□□ -2.25
CSNK1A1P48729 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
CSNK1A1P48729 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
CSNK1A1P48729 Y_RNA.48-201ENST00000362710 103 ntBASIC1.02□□□□□ -2.25
CSNK1A1P48729 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.02□□□□□ -2.25
CSNK1A1P48729 RNU6-793P-201ENST00000384233 104 ntBASIC1.02□□□□□ -2.25
CSNK1A1P48729 Y_RNA.573-201ENST00000384763 105 ntBASIC1.02□□□□□ -2.25
CSNK1A1P48729 AC009161.1-201ENST00000417306 376 ntBASIC1.02□□□□□ -2.25
CSNK1A1P48729 AL591704.2-201ENST00000421658 181 ntBASIC1.02□□□□□ -2.25
CSNK1A1P48729 SNX2P2-201ENST00000424553 323 ntBASIC1.02□□□□□ -2.25
CSNK1A1P48729 AC010154.1-201ENST00000425857 269 ntBASIC1.02□□□□□ -2.25
CSNK1A1P48729 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.02□□□□□ -2.25
CSNK1A1P48729 RPS26P45-201ENST00000471748 340 ntBASIC1.02□□□□□ -2.25
CSNK1A1P48729 AC092989.1-201ENST00000481235 277 ntBASIC1.02□□□□□ -2.25
CSNK1A1P48729 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.02□□□□□ -2.25
CSNK1A1P48729 RNU7-175P-201ENST00000515915 61 ntBASIC1.02□□□□□ -2.25
CSNK1A1P48729 RNU1-142P-201ENST00000516682 145 ntBASIC1.02□□□□□ -2.25
CSNK1A1P48729 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
CSNK1A1P48729 AL590705.4-201ENST00000532209 134 ntBASIC1.02□□□□□ -2.25
CSNK1A1P48729 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
CSNK1A1P48729 MIR6128-201ENST00000615528 109 ntBASIC1.02□□□□□ -2.25
CSNK1A1P48729 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
CSNK1A1P48729 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.02□□□□□ -2.25
CSNK1A1P48729 ZNF299P-201ENST00000406845 1804 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms