Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.75□□□□□ -2.13
ATRXP46100 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
ATRXP46100 AL359854.1-201ENST00000614203 1594 ntBASIC1.74□□□□□ -2.13
ATRXP46100 AL021368.2-201ENST00000606125 5352 ntBASIC1.74□□□□□ -2.13
ATRXP46100 Y_RNA.76-201ENST00000362931 109 ntBASIC1.74□□□□□ -2.13
ATRXP46100 RNU6-770P-201ENST00000363929 105 ntBASIC1.74□□□□□ -2.13
ATRXP46100 VTRNA1-3-201ENST00000365645 89 ntBASIC1.74□□□□□ -2.13
ATRXP46100 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
ATRXP46100 AL627390.1-201ENST00000396055 340 ntBASIC1.74□□□□□ -2.13
ATRXP46100 MIR888-201ENST00000401186 77 ntBASIC1.74□□□□□ -2.13
ATRXP46100 AC018865.2-201ENST00000423631 129 ntBASIC1.74□□□□□ -2.13
ATRXP46100 CBX3P6-201ENST00000430257 527 ntBASIC1.74□□□□□ -2.13
ATRXP46100 AC244505.4-201ENST00000434905 287 ntBASIC1.74□□□□□ -2.13
ATRXP46100 SSXP5-201ENST00000443473 287 ntBASIC1.74□□□□□ -2.13
ATRXP46100 RNU7-141P-201ENST00000459304 62 ntBASIC1.74□□□□□ -2.13
ATRXP46100 RNU6-475P-201ENST00000516073 104 ntBASIC1.74□□□□□ -2.13
ATRXP46100 RNA5SP309-201ENST00000516670 106 ntBASIC1.74□□□□□ -2.13
ATRXP46100 RNU6-965P-201ENST00000516721 96 ntBASIC1.74□□□□□ -2.13
ATRXP46100 SNORA31.16-201ENST00000516773 139 ntBASIC1.74□□□□□ -2.13
ATRXP46100 RNU6-255P-201ENST00000516957 105 ntBASIC1.74□□□□□ -2.13
ATRXP46100 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.74□□□□□ -2.13
ATRXP46100 AL590705.4-201ENST00000532209 134 ntBASIC1.74□□□□□ -2.13
ATRXP46100 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.74□□□□□ -2.13
ATRXP46100 MIR5571-201ENST00000577998 113 ntBASIC1.74□□□□□ -2.13
ATRXP46100 MIR4659A-201ENST00000580269 81 ntBASIC1.74□□□□□ -2.13
ATRXP46100 AC008749.1-201ENST00000597650 306 ntBASIC1.74□□□□□ -2.13
ATRXP46100 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.74□□□□□ -2.13
ATRXP46100 AC073410.2-201ENST00000603240 332 ntBASIC1.74□□□□□ -2.13
ATRXP46100 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.74□□□□□ -2.13
ATRXP46100 MIR8062-201ENST00000621515 85 ntBASIC1.74□□□□□ -2.13
ATRXP46100 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
ATRXP46100 RNU1-62P-201ENST00000362599 164 ntBASIC1.74□□□□□ -2.13
ATRXP46100 RNA5SP363-201ENST00000365072 115 ntBASIC1.74□□□□□ -2.13
ATRXP46100 RNU6-806P-201ENST00000365147 105 ntBASIC1.74□□□□□ -2.13
ATRXP46100 Y_RNA.376-201ENST00000365638 108 ntBASIC1.74□□□□□ -2.13
ATRXP46100 Y_RNA.504-201ENST00000384481 104 ntBASIC1.74□□□□□ -2.13
ATRXP46100 RNU6-310P-201ENST00000384655 107 ntBASIC1.74□□□□□ -2.13
ATRXP46100 MIR607-201ENST00000385241 96 ntBASIC1.74□□□□□ -2.13
ATRXP46100 U3.40-201ENST00000408706 208 ntBASIC1.74□□□□□ -2.13
ATRXP46100 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.74□□□□□ -2.13
ATRXP46100 HMGN2P10-201ENST00000448085 265 ntBASIC1.74□□□□□ -2.13
ATRXP46100 AC010099.1-201ENST00000455434 375 ntBASIC1.74□□□□□ -2.13
ATRXP46100 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.74□□□□□ -2.13
ATRXP46100 RNA5SP76-201ENST00000516277 87 ntBASIC1.74□□□□□ -2.13
ATRXP46100 AP004242.1-201ENST00000533701 349 ntBASIC1.74□□□□□ -2.13
ATRXP46100 Z98751.3-201ENST00000604447 521 ntBASIC1.74□□□□□ -2.13
ATRXP46100 AL442644.1-201ENST00000454390 3105 ntBASIC1.73□□□□□ -2.13
ATRXP46100 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
ATRXP46100 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
ATRXP46100 RNU6-428P-201ENST00000362942 107 ntBASIC1.73□□□□□ -2.13
ATRXP46100 SNORA36A-201ENST00000384221 132 ntBASIC1.73□□□□□ -2.13
ATRXP46100 Y_RNA.539-201ENST00000384635 107 ntBASIC1.73□□□□□ -2.13
ATRXP46100 MIR329-1-201ENST00000385028 80 ntBASIC1.73□□□□□ -2.13
ATRXP46100 RNU6-328P-201ENST00000390887 106 ntBASIC1.73□□□□□ -2.13
ATRXP46100 AL033519.2-201ENST00000403958 392 ntBASIC1.73□□□□□ -2.13
ATRXP46100 MIR1252-201ENST00000408861 65 ntBASIC1.73□□□□□ -2.13
ATRXP46100 HSPE1P25-201ENST00000455484 251 ntBASIC1.73□□□□□ -2.13
ATRXP46100 RNU6-1114P-201ENST00000516022 107 ntBASIC1.73□□□□□ -2.13
ATRXP46100 RNU2-53P-201ENST00000516257 147 ntBASIC1.73□□□□□ -2.13
ATRXP46100 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.73□□□□□ -2.13
ATRXP46100 MIR5006-201ENST00000583027 110 ntBASIC1.73□□□□□ -2.13
ATRXP46100 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC1.73□□□□□ -2.13
ATRXP46100 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.73□□□□□ -2.13
ATRXP46100 AC091152.2-201ENST00000591628 2569 ntBASIC1.73□□□□□ -2.13
ATRXP46100 SNORD78.2-201ENST00000391076 69 ntBASIC1.73□□□□□ -2.13
ATRXP46100 MIR190B-201ENST00000401119 79 ntBASIC1.73□□□□□ -2.13
ATRXP46100 RNU2-14P-201ENST00000411053 191 ntBASIC1.73□□□□□ -2.13
ATRXP46100 AL031183.1-201ENST00000457667 207 ntBASIC1.73□□□□□ -2.13
ATRXP46100 SNRPGP7-201ENST00000469016 106 ntBASIC1.73□□□□□ -2.13
ATRXP46100 RPL36AP48-201ENST00000485521 314 ntBASIC1.73□□□□□ -2.13
ATRXP46100 MIR5089-201ENST00000580047 84 ntBASIC1.73□□□□□ -2.13
ATRXP46100 AL390123.1-201ENST00000603216 237 ntBASIC1.73□□□□□ -2.13
ATRXP46100 AC062037.2-201ENST00000610137 73 ntBASIC1.73□□□□□ -2.13
ATRXP46100 ANKRD18EP-201ENST00000405487 2632 ntBASIC1.72□□□□□ -2.13
ATRXP46100 Y_RNA.54-201ENST00000362766 105 ntBASIC1.72□□□□□ -2.13
ATRXP46100 Y_RNA.401-201ENST00000383965 117 ntBASIC1.72□□□□□ -2.13
ATRXP46100 RNU6-142P-201ENST00000384019 107 ntBASIC1.72□□□□□ -2.13
ATRXP46100 RNU1-138P-201ENST00000384093 164 ntBASIC1.72□□□□□ -2.13
ATRXP46100 SAR1AP2-201ENST00000392696 594 ntBASIC1.72□□□□□ -2.13
ATRXP46100 RN7SKP61-201ENST00000410642 295 ntBASIC1.72□□□□□ -2.13
ATRXP46100 RNU6-1203P-201ENST00000410703 110 ntBASIC1.72□□□□□ -2.13
ATRXP46100 AC139712.2-201ENST00000424302 339 ntBASIC1.72□□□□□ -2.13
ATRXP46100 AL714022.1-201ENST00000439897 151 ntBASIC1.72□□□□□ -2.13
ATRXP46100 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.72□□□□□ -2.13
ATRXP46100 RNU7-169P-201ENST00000459456 61 ntBASIC1.72□□□□□ -2.13
ATRXP46100 RNU7-23P-201ENST00000459465 62 ntBASIC1.72□□□□□ -2.13
ATRXP46100 AP001025.1-201ENST00000486139 332 ntBASIC1.72□□□□□ -2.13
ATRXP46100 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.72□□□□□ -2.13
ATRXP46100 RNU4-77P-201ENST00000516692 156 ntBASIC1.72□□□□□ -2.13
ATRXP46100 RNU6-307P-201ENST00000516743 106 ntBASIC1.72□□□□□ -2.13
ATRXP46100 RRN3P3-201ENST00000549207 578 ntBASIC1.72□□□□□ -2.13
ATRXP46100 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
ATRXP46100 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
ATRXP46100 Y_RNA.60-201ENST00000362831 98 ntBASIC1.72□□□□□ -2.13
ATRXP46100 RNU1-93P-201ENST00000364704 169 ntBASIC1.72□□□□□ -2.13
ATRXP46100 RNU6-923P-201ENST00000364753 107 ntBASIC1.72□□□□□ -2.13
ATRXP46100 Y_RNA.307-201ENST00000365022 117 ntBASIC1.72□□□□□ -2.13
ATRXP46100 RNU6-1083P-201ENST00000384022 107 ntBASIC1.72□□□□□ -2.13
ATRXP46100 RNU6-700P-201ENST00000391043 107 ntBASIC1.72□□□□□ -2.13
ATRXP46100 MIR1302-6-201ENST00000408466 90 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms