Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 RNU6-746P-201ENST00000384112 109 ntBASIC2.55□□□□□ -2
MMP13P45452 SNORA19-201ENST00000384737 128 ntBASIC2.55□□□□□ -2
MMP13P45452 MIR208B-201ENST00000401172 77 ntBASIC2.55□□□□□ -2
MMP13P45452 RNA5SP504-201ENST00000410676 117 ntBASIC2.55□□□□□ -2
MMP13P45452 CYCSP48-201ENST00000417124 323 ntBASIC2.55□□□□□ -2
MMP13P45452 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.55□□□□□ -2
MMP13P45452 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.55□□□□□ -2
MMP13P45452 POLR2KP2-201ENST00000438155 177 ntBASIC2.55□□□□□ -2
MMP13P45452 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.55□□□□□ -2
MMP13P45452 Y_RNA.638-201ENST00000459374 113 ntBASIC2.55□□□□□ -2
MMP13P45452 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
MMP13P45452 RNA5SP320-201ENST00000516263 124 ntBASIC2.55□□□□□ -2
MMP13P45452 SNORD19.2-201ENST00000516978 73 ntBASIC2.55□□□□□ -2
MMP13P45452 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.55□□□□□ -2
MMP13P45452 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.55□□□□□ -2
MMP13P45452 CYP4A27P-201ENST00000567218 190 ntBASIC2.55□□□□□ -2
MMP13P45452 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.55□□□□□ -2
MMP13P45452 AL049779.4-201ENST00000604500 156 ntBASIC2.55□□□□□ -2
MMP13P45452 MIR6817-201ENST00000615588 66 ntBASIC2.55□□□□□ -2
MMP13P45452 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.55□□□□□ -2
MMP13P45452 AC006001.4-201ENST00000622243 395 ntBASIC2.55□□□□□ -2
MMP13P45452 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
MMP13P45452 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.54□□□□□ -2
MMP13P45452 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.54□□□□□ -2
MMP13P45452 AC004944.1-201ENST00000517807 3059 ntBASIC2.54□□□□□ -2
MMP13P45452 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.54□□□□□ -2
MMP13P45452 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
MMP13P45452 Y_RNA.170-201ENST00000363746 110 ntBASIC2.54□□□□□ -2
MMP13P45452 RNA5SP68-201ENST00000363885 119 ntBASIC2.54□□□□□ -2
MMP13P45452 Y_RNA.415-201ENST00000384012 112 ntBASIC2.54□□□□□ -2
MMP13P45452 RNU6-19P-201ENST00000384718 107 ntBASIC2.54□□□□□ -2
MMP13P45452 Y_RNA.590-201ENST00000410140 107 ntBASIC2.54□□□□□ -2
MMP13P45452 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.54□□□□□ -2
MMP13P45452 AL135790.2-201ENST00000437701 267 ntBASIC2.54□□□□□ -2
MMP13P45452 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.54□□□□□ -2
MMP13P45452 AL392103.1-201ENST00000447000 198 ntBASIC2.54□□□□□ -2
MMP13P45452 RPS3P1-201ENST00000456781 192 ntBASIC2.54□□□□□ -2
MMP13P45452 COX6CP14-201ENST00000469580 174 ntBASIC2.54□□□□□ -2
MMP13P45452 RNU6-191P-201ENST00000516295 94 ntBASIC2.54□□□□□ -2
MMP13P45452 RNU6-1198P-201ENST00000516904 67 ntBASIC2.54□□□□□ -2
MMP13P45452 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.54□□□□□ -2
MMP13P45452 MIR3910-1-201ENST00000580936 111 ntBASIC2.54□□□□□ -2
MMP13P45452 MIR3117-201ENST00000584034 78 ntBASIC2.54□□□□□ -2
MMP13P45452 DEFB117-201ENST00000602356 141 ntBASIC2.54□□□□□ -2
MMP13P45452 AL391813.1-201ENST00000603098 260 ntBASIC2.54□□□□□ -2
MMP13P45452 AL034555.1-201ENST00000604816 211 ntBASIC2.54□□□□□ -2
MMP13P45452 U4.3-201ENST00000621047 82 ntBASIC2.54□□□□□ -2
MMP13P45452 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.54□□□□□ -2
MMP13P45452 AC002543.1-201ENST00000299783 1954 ntBASIC2.54□□□□□ -2
MMP13P45452 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
MMP13P45452 RNU6-793P-201ENST00000384233 104 ntBASIC2.53□□□□□ -2
MMP13P45452 Y_RNA.510-201ENST00000384511 114 ntBASIC2.53□□□□□ -2
MMP13P45452 MIR634-201ENST00000385208 97 ntBASIC2.53□□□□□ -2
MMP13P45452 AL445687.1-201ENST00000439946 251 ntBASIC2.53□□□□□ -2
MMP13P45452 AC005042.3-201ENST00000453230 174 ntBASIC2.53□□□□□ -2
MMP13P45452 snoU13.14-201ENST00000459372 104 ntBASIC2.53□□□□□ -2
MMP13P45452 AP001324.2-201ENST00000461163 319 ntBASIC2.53□□□□□ -2
MMP13P45452 AL121594.1-201ENST00000475906 575 ntBASIC2.53□□□□□ -2
MMP13P45452 RNA5SP148-201ENST00000516527 94 ntBASIC2.53□□□□□ -2
MMP13P45452 MTND5P41-201ENST00000517498 206 ntBASIC2.53□□□□□ -2
MMP13P45452 MIR3162-201ENST00000581818 82 ntBASIC2.53□□□□□ -2
MMP13P45452 Z83818.1-201ENST00000603584 150 ntBASIC2.53□□□□□ -2
MMP13P45452 AC006023.1-201ENST00000603944 259 ntBASIC2.53□□□□□ -2
MMP13P45452 AL008718.3-201ENST00000610217 321 ntBASIC2.53□□□□□ -2
MMP13P45452 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.53□□□□□ -2
MMP13P45452 PCGEM1.1-201ENST00000613431 131 ntBASIC2.53□□□□□ -2
MMP13P45452 SCARNA15.3-201ENST00000626315 122 ntBASIC2.53□□□□□ -2
MMP13P45452 SCARNA4.1-201ENST00000628597 123 ntBASIC2.53□□□□□ -2
MMP13P45452 snoU18.1-201ENST00000629629 71 ntBASIC2.53□□□□□ -2
MMP13P45452 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.52□□□□□ -2.01
MMP13P45452 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
MMP13P45452 RNU6-653P-201ENST00000363074 106 ntBASIC2.52□□□□□ -2.01
MMP13P45452 SNORD87-201ENST00000364849 89 ntBASIC2.52□□□□□ -2.01
MMP13P45452 Y_RNA.308-201ENST00000365043 101 ntBASIC2.52□□□□□ -2.01
MMP13P45452 RNU6-748P-201ENST00000384648 107 ntBASIC2.52□□□□□ -2.01
MMP13P45452 MTCO2P33-201ENST00000402100 465 ntBASIC2.52□□□□□ -2.01
MMP13P45452 OOSP1P1-201ENST00000423265 274 ntBASIC2.52□□□□□ -2.01
MMP13P45452 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.52□□□□□ -2.01
MMP13P45452 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.52□□□□□ -2.01
MMP13P45452 AC104389.3-201ENST00000445629 235 ntBASIC2.52□□□□□ -2.01
MMP13P45452 AC012308.1-201ENST00000451232 178 ntBASIC2.52□□□□□ -2.01
MMP13P45452 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.52□□□□□ -2.01
MMP13P45452 AC074133.1-201ENST00000515696 183 ntBASIC2.52□□□□□ -2.01
MMP13P45452 RNU6-1219P-201ENST00000516143 112 ntBASIC2.52□□□□□ -2.01
MMP13P45452 RNU6-346P-201ENST00000516288 111 ntBASIC2.52□□□□□ -2.01
MMP13P45452 Y_RNA.679-201ENST00000516416 91 ntBASIC2.52□□□□□ -2.01
MMP13P45452 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.52□□□□□ -2.01
MMP13P45452 AC109329.2-201ENST00000519658 482 ntBASIC2.52□□□□□ -2.01
MMP13P45452 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
MMP13P45452 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.52□□□□□ -2.01
MMP13P45452 MIR3136-201ENST00000583498 78 ntBASIC2.52□□□□□ -2.01
MMP13P45452 AL356280.1-201ENST00000603614 379 ntBASIC2.52□□□□□ -2.01
MMP13P45452 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.52□□□□□ -2.01
MMP13P45452 FO624990.1-201ENST00000636373 85 ntBASIC2.52□□□□□ -2.01
MMP13P45452 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
MMP13P45452 AL136360.1-201ENST00000503377 1900 ntBASIC2.52□□□□□ -2.01
MMP13P45452 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.52□□□□□ -2.01
MMP13P45452 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.52□□□□□ -2.01
MMP13P45452 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
MMP13P45452 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms