Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CHRNA4P43681 SNORD9-201ENST00000362566 104 ntBASIC3.63□□□□□ -1.83
CHRNA4P43681 SNORA63D-201ENST00000364359 132 ntBASIC3.63□□□□□ -1.83
CHRNA4P43681 RNU6-1181P-201ENST00000384191 106 ntBASIC3.63□□□□□ -1.83
CHRNA4P43681 MIR562-201ENST00000384894 95 ntBASIC3.63□□□□□ -1.83
CHRNA4P43681 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CHRNA4P43681 RNU6-1197P-201ENST00000391183 107 ntBASIC3.63□□□□□ -1.83
CHRNA4P43681 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.63□□□□□ -1.83
CHRNA4P43681 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.63□□□□□ -1.83
CHRNA4P43681 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.63□□□□□ -1.83
CHRNA4P43681 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.63□□□□□ -1.83
CHRNA4P43681 AL929325.1-201ENST00000603096 117 ntBASIC3.63□□□□□ -1.83
CHRNA4P43681 Pinc.1-201ENST00000616452 154 ntBASIC3.63□□□□□ -1.83
CHRNA4P43681 AC002064.3-201ENST00000623448 346 ntBASIC3.63□□□□□ -1.83
CHRNA4P43681 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CHRNA4P43681 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CHRNA4P43681 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CHRNA4P43681 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHRNA4P43681 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHRNA4P43681 MIR208A-201ENST00000362287 71 ntBASIC3.62□□□□□ -1.83
CHRNA4P43681 SNORA4.2-201ENST00000365313 147 ntBASIC3.62□□□□□ -1.83
CHRNA4P43681 SNORA1-201ENST00000384107 130 ntBASIC3.62□□□□□ -1.83
CHRNA4P43681 Y_RNA.486-201ENST00000384398 107 ntBASIC3.62□□□□□ -1.83
CHRNA4P43681 RNU6-24P-201ENST00000384440 107 ntBASIC3.62□□□□□ -1.83
CHRNA4P43681 MIR449B-201ENST00000384995 97 ntBASIC3.62□□□□□ -1.83
CHRNA4P43681 AL138878.1-201ENST00000405131 347 ntBASIC3.62□□□□□ -1.83
CHRNA4P43681 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.62□□□□□ -1.83
CHRNA4P43681 AC018634.1-201ENST00000437554 401 ntBASIC3.62□□□□□ -1.83
CHRNA4P43681 SNRPGP3-201ENST00000469405 227 ntBASIC3.62□□□□□ -1.83
CHRNA4P43681 RPL27AP5-201ENST00000469428 449 ntBASIC3.62□□□□□ -1.83
CHRNA4P43681 AC093663.1-201ENST00000497190 394 ntBASIC3.62□□□□□ -1.83
CHRNA4P43681 AC023141.12-201ENST00000512399 199 ntBASIC3.62□□□□□ -1.83
CHRNA4P43681 SCARNA23-201ENST00000516060 130 ntBASIC3.62□□□□□ -1.83
CHRNA4P43681 RNU7-149P-201ENST00000516739 59 ntBASIC3.62□□□□□ -1.83
CHRNA4P43681 AC105137.2-201ENST00000569073 466 ntBASIC3.62□□□□□ -1.83
CHRNA4P43681 AC007229.1-201ENST00000590455 412 ntBASIC3.62□□□□□ -1.83
CHRNA4P43681 AC244205.2-202ENST00000635781 342 ntBASIC3.62□□□□□ -1.83
CHRNA4P43681 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
CHRNA4P43681 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHRNA4P43681 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.62□□□□□ -1.83
CHRNA4P43681 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CHRNA4P43681 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.61□□□□□ -1.83
CHRNA4P43681 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHRNA4P43681 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CHRNA4P43681 Y_RNA.203-201ENST00000364106 102 ntBASIC3.61□□□□□ -1.83
CHRNA4P43681 RNU6-1305P-201ENST00000364353 104 ntBASIC3.61□□□□□ -1.83
CHRNA4P43681 Y_RNA.344-201ENST00000365381 112 ntBASIC3.61□□□□□ -1.83
CHRNA4P43681 RNU6-979P-201ENST00000383896 107 ntBASIC3.61□□□□□ -1.83
CHRNA4P43681 RNU6-675P-201ENST00000384236 104 ntBASIC3.61□□□□□ -1.83
CHRNA4P43681 MIR7-3-201ENST00000384898 110 ntBASIC3.61□□□□□ -1.83
CHRNA4P43681 ATP5A1P2-201ENST00000412323 255 ntBASIC3.61□□□□□ -1.83
CHRNA4P43681 AL353705.1-201ENST00000433468 480 ntBASIC3.61□□□□□ -1.83
CHRNA4P43681 NDUFB4P6-201ENST00000436819 366 ntBASIC3.61□□□□□ -1.83
CHRNA4P43681 RPS29P31-201ENST00000446147 164 ntBASIC3.61□□□□□ -1.83
CHRNA4P43681 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.61□□□□□ -1.83
CHRNA4P43681 snoU13.14-201ENST00000459372 104 ntBASIC3.61□□□□□ -1.83
CHRNA4P43681 OR9P1P-201ENST00000496431 281 ntBASIC3.61□□□□□ -1.83
CHRNA4P43681 SCARNA13-201ENST00000516672 275 ntBASIC3.61□□□□□ -1.83
CHRNA4P43681 RNU6-1149P-201ENST00000516810 97 ntBASIC3.61□□□□□ -1.83
CHRNA4P43681 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.61□□□□□ -1.83
CHRNA4P43681 AC021739.1-201ENST00000559631 174 ntBASIC3.61□□□□□ -1.83
CHRNA4P43681 MIR4666B-201ENST00000578142 81 ntBASIC3.61□□□□□ -1.83
CHRNA4P43681 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHRNA4P43681 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHRNA4P43681 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.61□□□□□ -1.83
CHRNA4P43681 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.61□□□□□ -1.83
CHRNA4P43681 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CHRNA4P43681 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.6□□□□□ -1.83
CHRNA4P43681 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CHRNA4P43681 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHRNA4P43681 Y_RNA.40-201ENST00000362645 93 ntBASIC3.6□□□□□ -1.83
CHRNA4P43681 Y_RNA.796-201ENST00000364268 102 ntBASIC3.6□□□□□ -1.83
CHRNA4P43681 Y_RNA.799-201ENST00000364992 102 ntBASIC3.6□□□□□ -1.83
CHRNA4P43681 RNU6-1240P-201ENST00000365155 104 ntBASIC3.6□□□□□ -1.83
CHRNA4P43681 RPL21P3-201ENST00000395517 478 ntBASIC3.6□□□□□ -1.83
CHRNA4P43681 AC245291.1-201ENST00000419501 328 ntBASIC3.6□□□□□ -1.83
CHRNA4P43681 AL159169.1-201ENST00000421119 127 ntBASIC3.6□□□□□ -1.83
CHRNA4P43681 EIF4EP4-201ENST00000424916 578 ntBASIC3.6□□□□□ -1.83
CHRNA4P43681 AC017083.1-201ENST00000428093 483 ntBASIC3.6□□□□□ -1.83
CHRNA4P43681 AC245102.2-201ENST00000448956 180 ntBASIC3.6□□□□□ -1.83
CHRNA4P43681 AC145146.1-201ENST00000496370 254 ntBASIC3.6□□□□□ -1.83
CHRNA4P43681 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.6□□□□□ -1.83
CHRNA4P43681 AC104619.4-201ENST00000510773 249 ntBASIC3.6□□□□□ -1.83
CHRNA4P43681 RNU1-95P-201ENST00000516357 160 ntBASIC3.6□□□□□ -1.83
CHRNA4P43681 RNU6-504P-201ENST00000516568 104 ntBASIC3.6□□□□□ -1.83
CHRNA4P43681 RNU6-1018P-201ENST00000516577 106 ntBASIC3.6□□□□□ -1.83
CHRNA4P43681 RNY4P20-201ENST00000516678 93 ntBASIC3.6□□□□□ -1.83
CHRNA4P43681 RNU6-63P-201ENST00000516690 95 ntBASIC3.6□□□□□ -1.83
CHRNA4P43681 RNU1-128P-201ENST00000516704 160 ntBASIC3.6□□□□□ -1.83
CHRNA4P43681 SCARNA15-202ENST00000516881 127 ntBASIC3.6□□□□□ -1.83
CHRNA4P43681 MIR4738-201ENST00000579134 87 ntBASIC3.6□□□□□ -1.83
CHRNA4P43681 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.6□□□□□ -1.83
CHRNA4P43681 U4.6-201ENST00000621618 127 ntBASIC3.6□□□□□ -1.83
CHRNA4P43681 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.6□□□□□ -1.83
CHRNA4P43681 MIR4662A-201ENST00000637499 67 ntBASIC3.6□□□□□ -1.83
CHRNA4P43681 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.6□□□□□ -1.83
CHRNA4P43681 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHRNA4P43681 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CHRNA4P43681 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CHRNA4P43681 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms