Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.94□□□□□ -2.1
HNF4AP41235 AC112492.4-201ENST00000456549 352 ntBASIC1.94□□□□□ -2.1
HNF4AP41235 AC023442.1-201ENST00000531247 422 ntBASIC1.94□□□□□ -2.1
HNF4AP41235 EIF4A1P12-201ENST00000551910 141 ntBASIC1.94□□□□□ -2.1
HNF4AP41235 MIR4648-201ENST00000580107 72 ntBASIC1.94□□□□□ -2.1
HNF4AP41235 AC006504.6-201ENST00000590142 199 ntBASIC1.94□□□□□ -2.1
HNF4AP41235 VN1R91P-201ENST00000594377 169 ntBASIC1.94□□□□□ -2.1
HNF4AP41235 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.94□□□□□ -2.1
HNF4AP41235 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HNF4AP41235 U3.9-201ENST00000363823 204 ntBASIC1.93□□□□□ -2.1
HNF4AP41235 Y_RNA.332-201ENST00000365271 113 ntBASIC1.93□□□□□ -2.1
HNF4AP41235 RNU1-139P-201ENST00000391307 165 ntBASIC1.93□□□□□ -2.1
HNF4AP41235 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
HNF4AP41235 MTND2P23-201ENST00000422990 651 ntBASIC1.93□□□□□ -2.1
HNF4AP41235 USP9YP16-201ENST00000430287 407 ntBASIC1.93□□□□□ -2.1
HNF4AP41235 AL445646.1-201ENST00000431784 216 ntBASIC1.93□□□□□ -2.1
HNF4AP41235 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.93□□□□□ -2.1
HNF4AP41235 USP9YP23-201ENST00000455085 407 ntBASIC1.93□□□□□ -2.1
HNF4AP41235 RNU6-475P-201ENST00000516073 104 ntBASIC1.93□□□□□ -2.1
HNF4AP41235 SNORA40.14-201ENST00000516543 86 ntBASIC1.93□□□□□ -2.1
HNF4AP41235 SNORA44.1-201ENST00000517031 108 ntBASIC1.93□□□□□ -2.1
HNF4AP41235 DEFB131C-201ENST00000528817 165 ntBASIC1.93□□□□□ -2.1
HNF4AP41235 MIR3169-201ENST00000578032 83 ntBASIC1.93□□□□□ -2.1
HNF4AP41235 AC103810.8-201ENST00000607347 118 ntBASIC1.93□□□□□ -2.1
HNF4AP41235 AL590240.4-201ENST00000616908 390 ntBASIC1.93□□□□□ -2.1
HNF4AP41235 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HNF4AP41235 ZNF204P-201ENST00000416749 2397 ntBASIC1.93□□□□□ -2.1
HNF4AP41235 LINC02555-201ENST00000563933 1951 ntBASIC1.92□□□□□ -2.1
HNF4AP41235 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HNF4AP41235 RNU6-137P-201ENST00000363680 108 ntBASIC1.92□□□□□ -2.1
HNF4AP41235 RNU6-873P-201ENST00000363833 107 ntBASIC1.92□□□□□ -2.1
HNF4AP41235 RNU6-450P-201ENST00000364654 107 ntBASIC1.92□□□□□ -2.1
HNF4AP41235 RNU6-318P-201ENST00000384283 103 ntBASIC1.92□□□□□ -2.1
HNF4AP41235 RNU6-823P-201ENST00000391042 103 ntBASIC1.92□□□□□ -2.1
HNF4AP41235 RNU6-985P-201ENST00000410182 104 ntBASIC1.92□□□□□ -2.1
HNF4AP41235 RN7SKP192-201ENST00000411291 327 ntBASIC1.92□□□□□ -2.1
HNF4AP41235 RNU1-131P-201ENST00000458943 161 ntBASIC1.92□□□□□ -2.1
HNF4AP41235 RN7SL274P-201ENST00000492268 272 ntBASIC1.92□□□□□ -2.1
HNF4AP41235 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.92□□□□□ -2.1
HNF4AP41235 RNU6-1114P-201ENST00000516022 107 ntBASIC1.92□□□□□ -2.1
HNF4AP41235 RNU6-327P-201ENST00000516270 127 ntBASIC1.92□□□□□ -2.1
HNF4AP41235 RNU6-911P-201ENST00000516523 104 ntBASIC1.92□□□□□ -2.1
HNF4AP41235 RNU6-1198P-201ENST00000516904 67 ntBASIC1.92□□□□□ -2.1
HNF4AP41235 AC022868.1-201ENST00000517767 391 ntBASIC1.92□□□□□ -2.1
HNF4AP41235 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.92□□□□□ -2.1
HNF4AP41235 AC087441.2-201ENST00000529141 262 ntBASIC1.92□□□□□ -2.1
HNF4AP41235 MIR3198-2-201ENST00000577868 80 ntBASIC1.92□□□□□ -2.1
HNF4AP41235 MIR5695-201ENST00000579717 85 ntBASIC1.92□□□□□ -2.1
HNF4AP41235 AC005786.1-201ENST00000588553 154 ntBASIC1.92□□□□□ -2.1
HNF4AP41235 AC125232.2-201ENST00000592457 143 ntBASIC1.92□□□□□ -2.1
HNF4AP41235 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.92□□□□□ -2.1
HNF4AP41235 BX322639.1-202ENST00000423987 2213 ntBASIC1.92□□□□□ -2.1
HNF4AP41235 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
HNF4AP41235 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
HNF4AP41235 ZNF355P-201ENST00000427301 3216 ntBASIC1.91□□□□□ -2.1
HNF4AP41235 RNU6-1301P-201ENST00000362724 104 ntBASIC1.91□□□□□ -2.1
HNF4AP41235 SNORD14.1-201ENST00000365609 90 ntBASIC1.91□□□□□ -2.1
HNF4AP41235 AC117470.1-201ENST00000381974 330 ntBASIC1.91□□□□□ -2.1
HNF4AP41235 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.91□□□□□ -2.1
HNF4AP41235 AC004866.1-201ENST00000411748 78 ntBASIC1.91□□□□□ -2.1
HNF4AP41235 MTCO3P8-201ENST00000453691 755 ntBASIC1.91□□□□□ -2.1
HNF4AP41235 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.91□□□□□ -2.1
HNF4AP41235 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.91□□□□□ -2.1
HNF4AP41235 AC008834.1-201ENST00000511612 175 ntBASIC1.91□□□□□ -2.1
HNF4AP41235 RNA5SP54-201ENST00000516951 92 ntBASIC1.91□□□□□ -2.1
HNF4AP41235 AL442163.3-201ENST00000554110 156 ntBASIC1.91□□□□□ -2.1
HNF4AP41235 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.91□□□□□ -2.1
HNF4AP41235 MIR5089-201ENST00000580047 84 ntBASIC1.91□□□□□ -2.1
HNF4AP41235 AC008737.2-201ENST00000599446 118 ntBASIC1.91□□□□□ -2.1
HNF4AP41235 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.91□□□□□ -2.1
HNF4AP41235 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
HNF4AP41235 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.1
HNF4AP41235 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
HNF4AP41235 AL356292.1-201ENST00000283110 373 ntBASIC1.9□□□□□ -2.11
HNF4AP41235 RNA5SP361-201ENST00000362686 118 ntBASIC1.9□□□□□ -2.11
HNF4AP41235 RNU6-879P-201ENST00000364328 108 ntBASIC1.9□□□□□ -2.11
HNF4AP41235 SNORA18.2-201ENST00000383865 132 ntBASIC1.9□□□□□ -2.11
HNF4AP41235 Y_RNA.389-201ENST00000383924 113 ntBASIC1.9□□□□□ -2.11
HNF4AP41235 Y_RNA.424-201ENST00000384063 103 ntBASIC1.9□□□□□ -2.11
HNF4AP41235 MIR329-1-201ENST00000385028 80 ntBASIC1.9□□□□□ -2.11
HNF4AP41235 RNU2-20P-201ENST00000410425 191 ntBASIC1.9□□□□□ -2.11
HNF4AP41235 AC123900.1-201ENST00000420390 96 ntBASIC1.9□□□□□ -2.11
HNF4AP41235 RPL31P63-201ENST00000422565 375 ntBASIC1.9□□□□□ -2.11
HNF4AP41235 HSPE1P21-201ENST00000438283 308 ntBASIC1.9□□□□□ -2.11
HNF4AP41235 AC010095.1-201ENST00000443543 144 ntBASIC1.9□□□□□ -2.11
HNF4AP41235 U8.20-201ENST00000459445 131 ntBASIC1.9□□□□□ -2.11
HNF4AP41235 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.9□□□□□ -2.11
HNF4AP41235 AC010469.2-201ENST00000496412 480 ntBASIC1.9□□□□□ -2.11
HNF4AP41235 RNU1-41P-201ENST00000516161 162 ntBASIC1.9□□□□□ -2.11
HNF4AP41235 RNVU1-2-201ENST00000516326 135 ntBASIC1.9□□□□□ -2.11
HNF4AP41235 RNU1-48P-201ENST00000516400 162 ntBASIC1.9□□□□□ -2.11
HNF4AP41235 SNORA25.14-201ENST00000516481 132 ntBASIC1.9□□□□□ -2.11
HNF4AP41235 AC040926.1-201ENST00000530195 238 ntBASIC1.9□□□□□ -2.11
HNF4AP41235 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.9□□□□□ -2.11
HNF4AP41235 AC090517.1-201ENST00000569307 266 ntBASIC1.9□□□□□ -2.11
HNF4AP41235 AC113195.1-201ENST00000579952 141 ntBASIC1.9□□□□□ -2.11
HNF4AP41235 AC124312.5-201ENST00000604451 268 ntBASIC1.9□□□□□ -2.11
HNF4AP41235 PART1_1.1-201ENST00000611761 217 ntBASIC1.9□□□□□ -2.11
HNF4AP41235 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
HNF4AP41235 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 171.3 ms