Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 MIR660-201ENST00000385235 97 ntBASIC0.28□□□□□ -2.36
COL4A5P29400 AF228730.1-201ENST00000397972 663 ntBASIC0.28□□□□□ -2.36
COL4A5P29400 RNA5SP504-201ENST00000410676 117 ntBASIC0.28□□□□□ -2.36
COL4A5P29400 MTCO2P7-201ENST00000446518 666 ntBASIC0.28□□□□□ -2.36
COL4A5P29400 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC0.28□□□□□ -2.36
COL4A5P29400 UBE2V1P12-201ENST00000503954 474 ntBASIC0.28□□□□□ -2.36
COL4A5P29400 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.28□□□□□ -2.36
COL4A5P29400 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.28□□□□□ -2.36
COL4A5P29400 RNU2-69P-201ENST00000516061 100 ntBASIC0.28□□□□□ -2.36
COL4A5P29400 SCARNA24.1-201ENST00000516465 137 ntBASIC0.28□□□□□ -2.36
COL4A5P29400 MTND1P35-201ENST00000526739 508 ntBASIC0.28□□□□□ -2.36
COL4A5P29400 MIR4493-201ENST00000584016 73 ntBASIC0.28□□□□□ -2.36
COL4A5P29400 AL390123.1-201ENST00000603216 237 ntBASIC0.28□□□□□ -2.36
COL4A5P29400 AC002044.1-201ENST00000606707 158 ntBASIC0.28□□□□□ -2.36
COL4A5P29400 TUSC7.1-201ENST00000610969 165 ntBASIC0.28□□□□□ -2.36
COL4A5P29400 U6.73-201ENST00000619194 103 ntBASIC0.28□□□□□ -2.36
COL4A5P29400 uc_338.17-201ENST00000619633 179 ntBASIC0.28□□□□□ -2.36
COL4A5P29400 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.28□□□□□ -2.36
COL4A5P29400 AC009161.2-201ENST00000624626 138 ntBASIC0.28□□□□□ -2.36
COL4A5P29400 AC007671.2-201ENST00000637344 619 ntBASIC0.28□□□□□ -2.36
COL4A5P29400 Y_RNA.265-201ENST00000364677 108 ntBASIC0.27□□□□□ -2.37
COL4A5P29400 RNU4-28P-201ENST00000364739 141 ntBASIC0.27□□□□□ -2.37
COL4A5P29400 Y_RNA.363-201ENST00000365529 113 ntBASIC0.27□□□□□ -2.37
COL4A5P29400 Y_RNA.399-201ENST00000383955 105 ntBASIC0.27□□□□□ -2.37
COL4A5P29400 RNU6-245P-201ENST00000384020 107 ntBASIC0.27□□□□□ -2.37
COL4A5P29400 RNU6-163P-201ENST00000384396 106 ntBASIC0.27□□□□□ -2.37
COL4A5P29400 RNU6-456P-201ENST00000384493 107 ntBASIC0.27□□□□□ -2.37
COL4A5P29400 Y_RNA.560-201ENST00000384689 102 ntBASIC0.27□□□□□ -2.37
COL4A5P29400 SSR1P2-201ENST00000415208 787 ntBASIC0.27□□□□□ -2.37
COL4A5P29400 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.27□□□□□ -2.37
COL4A5P29400 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.27□□□□□ -2.37
COL4A5P29400 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.27□□□□□ -2.37
COL4A5P29400 SNRPGP12-201ENST00000449481 213 ntBASIC0.27□□□□□ -2.37
COL4A5P29400 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.27□□□□□ -2.37
COL4A5P29400 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.27□□□□□ -2.37
COL4A5P29400 RNU7-21P-201ENST00000459430 62 ntBASIC0.27□□□□□ -2.37
COL4A5P29400 AC091874.1-201ENST00000511402 339 ntBASIC0.27□□□□□ -2.37
COL4A5P29400 SNORA31.10-201ENST00000516482 106 ntBASIC0.27□□□□□ -2.37
COL4A5P29400 RNU7-28P-201ENST00000516759 62 ntBASIC0.27□□□□□ -2.37
COL4A5P29400 RNU6-1220P-201ENST00000517126 108 ntBASIC0.27□□□□□ -2.37
COL4A5P29400 MTND2P32-201ENST00000521584 1038 ntBASIC0.27□□□□□ -2.37
COL4A5P29400 MTND1P15-201ENST00000579262 949 ntBASIC0.27□□□□□ -2.37
COL4A5P29400 AL353765.1-201ENST00000605514 183 ntBASIC0.27□□□□□ -2.37
COL4A5P29400 AC006566.1-201ENST00000608943 513 ntBASIC0.27□□□□□ -2.37
COL4A5P29400 AC091304.9-201ENST00000612091 226 ntBASIC0.27□□□□□ -2.37
COL4A5P29400 AC093913.1-201ENST00000614178 329 ntBASIC0.27□□□□□ -2.37
COL4A5P29400 AL138726.1-201ENST00000614873 333 ntBASIC0.27□□□□□ -2.37
COL4A5P29400 SNORD113-6-201ENST00000363345 75 ntBASIC0.27□□□□□ -2.37
COL4A5P29400 RNU6-266P-201ENST00000364225 107 ntBASIC0.27□□□□□ -2.37
COL4A5P29400 RNU6-969P-201ENST00000383900 105 ntBASIC0.27□□□□□ -2.37
COL4A5P29400 RNU1-119P-201ENST00000391122 165 ntBASIC0.27□□□□□ -2.37
COL4A5P29400 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.27□□□□□ -2.37
COL4A5P29400 NDUFB4P10-201ENST00000452541 359 ntBASIC0.27□□□□□ -2.37
COL4A5P29400 AC067940.1-201ENST00000458411 300 ntBASIC0.27□□□□□ -2.37
COL4A5P29400 SNORD42A-201ENST00000459584 64 ntBASIC0.27□□□□□ -2.37
COL4A5P29400 AC091133.4-201ENST00000511142 308 ntBASIC0.27□□□□□ -2.37
COL4A5P29400 RNU6-311P-201ENST00000516224 102 ntBASIC0.27□□□□□ -2.37
COL4A5P29400 RNU2-46P-201ENST00000517038 113 ntBASIC0.27□□□□□ -2.37
COL4A5P29400 RPL21P9-201ENST00000556149 474 ntBASIC0.27□□□□□ -2.37
COL4A5P29400 MIR4703-201ENST00000577728 79 ntBASIC0.27□□□□□ -2.37
COL4A5P29400 MIR5695-201ENST00000579717 85 ntBASIC0.27□□□□□ -2.37
COL4A5P29400 RNU4-73P-201ENST00000363164 141 ntBASIC0.26□□□□□ -2.37
COL4A5P29400 Y_RNA.185-201ENST00000363894 100 ntBASIC0.26□□□□□ -2.37
COL4A5P29400 SNORA67.2-201ENST00000384300 149 ntBASIC0.26□□□□□ -2.37
COL4A5P29400 RNU5A-2P-201ENST00000384337 116 ntBASIC0.26□□□□□ -2.37
COL4A5P29400 MIR605-201ENST00000385078 83 ntBASIC0.26□□□□□ -2.37
COL4A5P29400 MIR1185-2-201ENST00000408687 86 ntBASIC0.26□□□□□ -2.37
COL4A5P29400 AC233266.1-201ENST00000454518 96 ntBASIC0.26□□□□□ -2.37
COL4A5P29400 MTND4P7-201ENST00000523876 130 ntBASIC0.26□□□□□ -2.37
COL4A5P29400 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.26□□□□□ -2.37
COL4A5P29400 AC109810.1-201ENST00000534066 224 ntBASIC0.26□□□□□ -2.37
COL4A5P29400 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.26□□□□□ -2.37
COL4A5P29400 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.26□□□□□ -2.37
COL4A5P29400 SUB1P2-201ENST00000556401 297 ntBASIC0.26□□□□□ -2.37
COL4A5P29400 MTND1P8-201ENST00000571424 950 ntBASIC0.26□□□□□ -2.37
COL4A5P29400 AC097065.2-201ENST00000608159 533 ntBASIC0.26□□□□□ -2.37
COL4A5P29400 AC242852.1-201ENST00000612151 96 ntBASIC0.26□□□□□ -2.37
COL4A5P29400 AP001506.1-201ENST00000615444 211 ntBASIC0.26□□□□□ -2.37
COL4A5P29400 AC244015.1-201ENST00000622301 99 ntBASIC0.26□□□□□ -2.37
COL4A5P29400 AL078595.3-201ENST00000623815 1166 ntBASIC0.26□□□□□ -2.37
COL4A5P29400 SNORA43.4-201ENST00000629559 138 ntBASIC0.26□□□□□ -2.37
COL4A5P29400 AC134026.1-201ENST00000623249 2239 ntBASIC0.26□□□□□ -2.37
COL4A5P29400 RNU6-181P-201ENST00000363225 107 ntBASIC0.25□□□□□ -2.37
COL4A5P29400 Y_RNA.330-201ENST00000365230 109 ntBASIC0.25□□□□□ -2.37
COL4A5P29400 Y_RNA.367-201ENST00000365544 101 ntBASIC0.25□□□□□ -2.37
COL4A5P29400 RNU6-1286P-201ENST00000383871 107 ntBASIC0.25□□□□□ -2.37
COL4A5P29400 SNORA8.3-201ENST00000384679 139 ntBASIC0.25□□□□□ -2.37
COL4A5P29400 Y_RNA.572-201ENST00000384757 98 ntBASIC0.25□□□□□ -2.37
COL4A5P29400 SNORA40.3-201ENST00000390964 122 ntBASIC0.25□□□□□ -2.37
COL4A5P29400 SNORA16.2-201ENST00000390991 127 ntBASIC0.25□□□□□ -2.37
COL4A5P29400 RNU6-903P-201ENST00000391270 109 ntBASIC0.25□□□□□ -2.37
COL4A5P29400 MIR891A-201ENST00000401237 79 ntBASIC0.25□□□□□ -2.37
COL4A5P29400 RNU6-584P-201ENST00000410350 95 ntBASIC0.25□□□□□ -2.37
COL4A5P29400 RPS26P42-201ENST00000413485 326 ntBASIC0.25□□□□□ -2.37
COL4A5P29400 TIMM9P3-201ENST00000428659 274 ntBASIC0.25□□□□□ -2.37
COL4A5P29400 AC009961.2-201ENST00000435771 251 ntBASIC0.25□□□□□ -2.37
COL4A5P29400 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.25□□□□□ -2.37
COL4A5P29400 AL009048.1-201ENST00000450437 298 ntBASIC0.25□□□□□ -2.37
COL4A5P29400 RPS29P15-201ENST00000458329 171 ntBASIC0.25□□□□□ -2.37
COL4A5P29400 RNU6-445P-201ENST00000516949 107 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms