Protein–RNA interactions for Protein: P27694

RPA1, Replication protein A 70 kDa DNA-binding subunit, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1P27694 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.57□□□□□ -2.16
RPA1P27694 AL512598.1-201ENST00000610158 273 ntBASIC1.57□□□□□ -2.16
RPA1P27694 AL353149.1-201ENST00000610667 244 ntBASIC1.57□□□□□ -2.16
RPA1P27694 TCL6_2.1-201ENST00000615162 119 ntBASIC1.57□□□□□ -2.16
RPA1P27694 AC005562.2-201ENST00000618264 111 ntBASIC1.57□□□□□ -2.16
RPA1P27694 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
RPA1P27694 MTND4P12-201ENST00000498999 1377 ntBASIC1.57□□□□□ -2.16
RPA1P27694 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
RPA1P27694 ZNF209P-201ENST00000593450 2304 ntBASIC1.56□□□□□ -2.16
RPA1P27694 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
RPA1P27694 RNU6-1188P-201ENST00000363795 107 ntBASIC1.56□□□□□ -2.16
RPA1P27694 RNU6-595P-201ENST00000363944 107 ntBASIC1.56□□□□□ -2.16
RPA1P27694 MIR1283-1-201ENST00000408494 87 ntBASIC1.56□□□□□ -2.16
RPA1P27694 RNU2-7P-201ENST00000410794 178 ntBASIC1.56□□□□□ -2.16
RPA1P27694 MRPS18CP6-201ENST00000423587 223 ntBASIC1.56□□□□□ -2.16
RPA1P27694 OR2AQ1P-201ENST00000451972 200 ntBASIC1.56□□□□□ -2.16
RPA1P27694 AC005908.1-201ENST00000468701 347 ntBASIC1.56□□□□□ -2.16
RPA1P27694 ACA59.1-201ENST00000515966 143 ntBASIC1.56□□□□□ -2.16
RPA1P27694 RNU6-948P-201ENST00000516374 107 ntBASIC1.56□□□□□ -2.16
RPA1P27694 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.56□□□□□ -2.16
RPA1P27694 AL161670.1-201ENST00000554348 137 ntBASIC1.56□□□□□ -2.16
RPA1P27694 AL355375.2-201ENST00000574825 175 ntBASIC1.56□□□□□ -2.16
RPA1P27694 MIR5701-3-201ENST00000578890 82 ntBASIC1.56□□□□□ -2.16
RPA1P27694 MIR4753-201ENST00000585119 83 ntBASIC1.56□□□□□ -2.16
RPA1P27694 MIR5701-1-201ENST00000585138 82 ntBASIC1.56□□□□□ -2.16
RPA1P27694 MIR5701-2-201ENST00000615634 82 ntBASIC1.56□□□□□ -2.16
RPA1P27694 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.56□□□□□ -2.16
RPA1P27694 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.56□□□□□ -2.16
RPA1P27694 SCARNA4-201ENST00000629045 128 ntBASIC1.56□□□□□ -2.16
RPA1P27694 ZNF204P-201ENST00000416749 2397 ntBASIC1.56□□□□□ -2.16
RPA1P27694 Y_RNA.482-201ENST00000384377 111 ntBASIC1.55□□□□□ -2.16
RPA1P27694 MIR320B2-201ENST00000408479 138 ntBASIC1.55□□□□□ -2.16
RPA1P27694 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.55□□□□□ -2.16
RPA1P27694 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.55□□□□□ -2.16
RPA1P27694 CST2P1-201ENST00000425770 87 ntBASIC1.55□□□□□ -2.16
RPA1P27694 AC004386.2-201ENST00000441858 148 ntBASIC1.55□□□□□ -2.16
RPA1P27694 MTND5P20-201ENST00000448677 143 ntBASIC1.55□□□□□ -2.16
RPA1P27694 AC074290.1-201ENST00000448883 135 ntBASIC1.55□□□□□ -2.16
RPA1P27694 RNU7-95P-201ENST00000459222 64 ntBASIC1.55□□□□□ -2.16
RPA1P27694 AP000870.1-201ENST00000472927 406 ntBASIC1.55□□□□□ -2.16
RPA1P27694 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.55□□□□□ -2.16
RPA1P27694 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.55□□□□□ -2.16
RPA1P27694 RAB11AP2-201ENST00000545905 639 ntBASIC1.55□□□□□ -2.16
RPA1P27694 AC005668.1-201ENST00000571142 476 ntBASIC1.55□□□□□ -2.16
RPA1P27694 MIR4273-201ENST00000582824 84 ntBASIC1.55□□□□□ -2.16
RPA1P27694 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.55□□□□□ -2.16
RPA1P27694 Y_RNA.804-201ENST00000615262 101 ntBASIC1.55□□□□□ -2.16
RPA1P27694 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.55□□□□□ -2.16
RPA1P27694 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.55□□□□□ -2.16
RPA1P27694 MIR1302-1-201ENST00000637932 143 ntBASIC1.55□□□□□ -2.16
RPA1P27694 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
RPA1P27694 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
RPA1P27694 RNU1-96P-201ENST00000364163 162 ntBASIC1.54□□□□□ -2.16
RPA1P27694 RNU6-596P-201ENST00000365395 98 ntBASIC1.54□□□□□ -2.16
RPA1P27694 Y_RNA.356-201ENST00000365475 113 ntBASIC1.54□□□□□ -2.16
RPA1P27694 Y_RNA.394-201ENST00000383942 103 ntBASIC1.54□□□□□ -2.16
RPA1P27694 SNORA67.2-201ENST00000384300 149 ntBASIC1.54□□□□□ -2.16
RPA1P27694 AP1B1P2-201ENST00000416196 106 ntBASIC1.54□□□□□ -2.16
RPA1P27694 AL139396.1-201ENST00000421137 167 ntBASIC1.54□□□□□ -2.16
RPA1P27694 MTND3P23-201ENST00000431980 347 ntBASIC1.54□□□□□ -2.16
RPA1P27694 AC016717.1-201ENST00000448918 286 ntBASIC1.54□□□□□ -2.16
RPA1P27694 CHEK2P4-201ENST00000450340 246 ntBASIC1.54□□□□□ -2.16
RPA1P27694 RN7SKP210-201ENST00000459176 261 ntBASIC1.54□□□□□ -2.16
RPA1P27694 Y_RNA.632-201ENST00000459189 102 ntBASIC1.54□□□□□ -2.16
RPA1P27694 AC007215.1-201ENST00000464893 276 ntBASIC1.54□□□□□ -2.16
RPA1P27694 RNA5SP61-201ENST00000516453 100 ntBASIC1.54□□□□□ -2.16
RPA1P27694 Y_RNA.702-201ENST00000516843 96 ntBASIC1.54□□□□□ -2.16
RPA1P27694 RNU6-58P-201ENST00000517143 103 ntBASIC1.54□□□□□ -2.16
RPA1P27694 DNAJC19P9-201ENST00000555084 351 ntBASIC1.54□□□□□ -2.16
RPA1P27694 SNORA77B-201ENST00000578179 125 ntBASIC1.54□□□□□ -2.16
RPA1P27694 SNRPGP20-201ENST00000604477 205 ntBASIC1.54□□□□□ -2.16
RPA1P27694 MIR1244-1-201ENST00000612829 85 ntBASIC1.54□□□□□ -2.16
RPA1P27694 MIR1244-3-201ENST00000635744 85 ntBASIC1.54□□□□□ -2.16
RPA1P27694 AC068205.3-201ENST00000636385 468 ntBASIC1.54□□□□□ -2.16
RPA1P27694 MIR1244-2-201ENST00000636449 85 ntBASIC1.54□□□□□ -2.16
RPA1P27694 MIR1244-4-202ENST00000636813 85 ntBASIC1.54□□□□□ -2.16
RPA1P27694 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
RPA1P27694 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.54□□□□□ -2.16
RPA1P27694 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
RPA1P27694 RNU6-862P-201ENST00000362804 105 ntBASIC1.53□□□□□ -2.16
RPA1P27694 RNU6-99P-201ENST00000364721 107 ntBASIC1.53□□□□□ -2.16
RPA1P27694 SNORA72.2-201ENST00000365028 127 ntBASIC1.53□□□□□ -2.16
RPA1P27694 RNU6-418P-201ENST00000384035 107 ntBASIC1.53□□□□□ -2.16
RPA1P27694 RNU6-890P-201ENST00000384121 107 ntBASIC1.53□□□□□ -2.16
RPA1P27694 RNU6-17P-201ENST00000384245 107 ntBASIC1.53□□□□□ -2.16
RPA1P27694 RNU6-18P-201ENST00000384527 107 ntBASIC1.53□□□□□ -2.16
RPA1P27694 MIR515-2-201ENST00000384883 83 ntBASIC1.53□□□□□ -2.16
RPA1P27694 MIR515-1-201ENST00000384884 83 ntBASIC1.53□□□□□ -2.16
RPA1P27694 BTF3P4-201ENST00000418852 495 ntBASIC1.53□□□□□ -2.16
RPA1P27694 MTND4LP11-201ENST00000422184 280 ntBASIC1.53□□□□□ -2.16
RPA1P27694 AC099677.2-201ENST00000436385 175 ntBASIC1.53□□□□□ -2.16
RPA1P27694 HSPE1P9-201ENST00000440046 311 ntBASIC1.53□□□□□ -2.16
RPA1P27694 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.53□□□□□ -2.16
RPA1P27694 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.53□□□□□ -2.16
RPA1P27694 snoU13.30-201ENST00000458951 104 ntBASIC1.53□□□□□ -2.16
RPA1P27694 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.53□□□□□ -2.16
RPA1P27694 RNA5SP445-201ENST00000515889 115 ntBASIC1.53□□□□□ -2.16
RPA1P27694 RNU6-559P-201ENST00000516151 98 ntBASIC1.53□□□□□ -2.16
RPA1P27694 Y_RNA.708-201ENST00000516950 96 ntBASIC1.53□□□□□ -2.16
RPA1P27694 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms