Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4□□□□□ -1.77
VARSP26640 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.99□□□□□ -1.77
VARSP26640 Y_RNA.198-201ENST00000364013 98 ntBASIC3.99□□□□□ -1.77
VARSP26640 MIR591-201ENST00000385290 95 ntBASIC3.99□□□□□ -1.77
VARSP26640 RNA5SP38-201ENST00000410750 119 ntBASIC3.99□□□□□ -1.77
VARSP26640 DBIP2-201ENST00000419076 262 ntBASIC3.99□□□□□ -1.77
VARSP26640 MTATP8P2-201ENST00000435212 202 ntBASIC3.99□□□□□ -1.77
VARSP26640 AC006011.1-201ENST00000442758 349 ntBASIC3.99□□□□□ -1.77
VARSP26640 AC109327.2-201ENST00000448339 378 ntBASIC3.99□□□□□ -1.77
VARSP26640 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.99□□□□□ -1.77
VARSP26640 MRPS17P9-201ENST00000511924 393 ntBASIC3.99□□□□□ -1.77
VARSP26640 SNORA31.1-201ENST00000515993 133 ntBASIC3.99□□□□□ -1.77
VARSP26640 SNORA31.5-201ENST00000516190 133 ntBASIC3.99□□□□□ -1.77
VARSP26640 RNU6-1146P-201ENST00000516282 102 ntBASIC3.99□□□□□ -1.77
VARSP26640 RNU6-1231P-201ENST00000517185 103 ntBASIC3.99□□□□□ -1.77
VARSP26640 IGKV3-31-201ENST00000523109 329 ntBASIC3.99□□□□□ -1.77
VARSP26640 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.99□□□□□ -1.77
VARSP26640 SNORD115-40-201ENST00000606510 82 ntBASIC3.99□□□□□ -1.77
VARSP26640 Y_RNA.818-201ENST00000618813 71 ntBASIC3.99□□□□□ -1.77
VARSP26640 AC015726.2-201ENST00000620112 122 ntBASIC3.99□□□□□ -1.77
VARSP26640 U6.98-201ENST00000637157 84 ntBASIC3.99□□□□□ -1.77
VARSP26640 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.99□□□□□ -1.77
VARSP26640 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VARSP26640 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.99□□□□□ -1.77
VARSP26640 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VARSP26640 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VARSP26640 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.98□□□□□ -1.77
VARSP26640 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VARSP26640 RNU6-414P-201ENST00000363705 104 ntBASIC3.98□□□□□ -1.77
VARSP26640 RNU6-1235P-201ENST00000384559 107 ntBASIC3.98□□□□□ -1.77
VARSP26640 Y_RNA.621-201ENST00000411065 96 ntBASIC3.98□□□□□ -1.77
VARSP26640 RNU6-498P-201ENST00000459468 107 ntBASIC3.98□□□□□ -1.77
VARSP26640 NDUFA4P2-201ENST00000489989 244 ntBASIC3.98□□□□□ -1.77
VARSP26640 RNU6-240P-201ENST00000516098 97 ntBASIC3.98□□□□□ -1.77
VARSP26640 AC068339.1-201ENST00000526965 141 ntBASIC3.98□□□□□ -1.77
VARSP26640 RN7SL703P-201ENST00000578485 302 ntBASIC3.98□□□□□ -1.77
VARSP26640 XIST_intron.1-201ENST00000619444 68 ntBASIC3.98□□□□□ -1.77
VARSP26640 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VARSP26640 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VARSP26640 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.98□□□□□ -1.77
VARSP26640 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VARSP26640 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.97□□□□□ -1.77
VARSP26640 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
VARSP26640 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VARSP26640 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VARSP26640 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.97□□□□□ -1.77
VARSP26640 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.97□□□□□ -1.77
VARSP26640 MIR494-201ENST00000349529 81 ntBASIC3.97□□□□□ -1.77
VARSP26640 HMGN2P8-201ENST00000391458 268 ntBASIC3.97□□□□□ -1.77
VARSP26640 AL031121.1-201ENST00000406553 254 ntBASIC3.97□□□□□ -1.77
VARSP26640 AL513477.1-202ENST00000417061 214 ntBASIC3.97□□□□□ -1.77
VARSP26640 AL117339.2-201ENST00000430475 180 ntBASIC3.97□□□□□ -1.77
VARSP26640 HMGN2P31-201ENST00000432430 273 ntBASIC3.97□□□□□ -1.77
VARSP26640 RNA5SP246-201ENST00000458909 119 ntBASIC3.97□□□□□ -1.77
VARSP26640 snoU13.22-201ENST00000459428 104 ntBASIC3.97□□□□□ -1.77
VARSP26640 RNU6ATAC17P-201ENST00000516074 71 ntBASIC3.97□□□□□ -1.77
VARSP26640 SCARNA15-202ENST00000516881 127 ntBASIC3.97□□□□□ -1.77
VARSP26640 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.97□□□□□ -1.77
VARSP26640 AC141557.1-201ENST00000540982 400 ntBASIC3.97□□□□□ -1.77
VARSP26640 MIR4444-1-201ENST00000581696 74 ntBASIC3.97□□□□□ -1.77
VARSP26640 MIR4444-2-201ENST00000584390 74 ntBASIC3.97□□□□□ -1.77
VARSP26640 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.97□□□□□ -1.77
VARSP26640 MALAT1.1-201ENST00000618249 95 ntBASIC3.97□□□□□ -1.77
VARSP26640 MIR2052-201ENST00000636055 55 ntBASIC3.97□□□□□ -1.77
VARSP26640 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.97□□□□□ -1.77
VARSP26640 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VARSP26640 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.97□□□□□ -1.77
VARSP26640 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.97□□□□□ -1.77
VARSP26640 AC009487.4-201ENST00000624969 3585 ntBASIC3.97□□□□□ -1.77
VARSP26640 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
VARSP26640 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
VARSP26640 RNU6-888P-201ENST00000363010 101 ntBASIC3.96□□□□□ -1.78
VARSP26640 RNU6-944P-201ENST00000364023 107 ntBASIC3.96□□□□□ -1.78
VARSP26640 MIR670-201ENST00000390142 98 ntBASIC3.96□□□□□ -1.78
VARSP26640 SNORD77.3-201ENST00000391113 65 ntBASIC3.96□□□□□ -1.78
VARSP26640 AL356095.1-201ENST00000417217 199 ntBASIC3.96□□□□□ -1.78
VARSP26640 RNU7-143P-201ENST00000516781 65 ntBASIC3.96□□□□□ -1.78
VARSP26640 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.96□□□□□ -1.78
VARSP26640 RN7SL600P-201ENST00000581811 299 ntBASIC3.96□□□□□ -1.78
VARSP26640 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VARSP26640 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VARSP26640 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VARSP26640 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.95□□□□□ -1.78
VARSP26640 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.95□□□□□ -1.78
VARSP26640 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
VARSP26640 Y_RNA.213-201ENST00000364178 111 ntBASIC3.95□□□□□ -1.78
VARSP26640 RNA5SP283-201ENST00000365604 119 ntBASIC3.95□□□□□ -1.78
VARSP26640 RNU6-1152P-201ENST00000384576 107 ntBASIC3.95□□□□□ -1.78
VARSP26640 MIR759-201ENST00000390224 91 ntBASIC3.95□□□□□ -1.78
VARSP26640 SNORD78.1-201ENST00000390866 65 ntBASIC3.95□□□□□ -1.78
VARSP26640 RNA5SP171-201ENST00000391071 115 ntBASIC3.95□□□□□ -1.78
VARSP26640 RNU6-693P-201ENST00000516134 107 ntBASIC3.95□□□□□ -1.78
VARSP26640 Y_RNA.666-201ENST00000516187 112 ntBASIC3.95□□□□□ -1.78
VARSP26640 RNU6-1096P-201ENST00000517089 102 ntBASIC3.95□□□□□ -1.78
VARSP26640 RNU6-711P-201ENST00000517255 106 ntBASIC3.95□□□□□ -1.78
VARSP26640 MIR3186-201ENST00000577404 85 ntBASIC3.95□□□□□ -1.78
VARSP26640 MIR7151-201ENST00000617477 60 ntBASIC3.95□□□□□ -1.78
VARSP26640 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VARSP26640 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
VARSP26640 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 245.8 ms