Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.71□□□□□ -1.98
CD40P25942 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.71□□□□□ -1.98
CD40P25942 RNA5SP20-201ENST00000515976 84 ntBASIC2.71□□□□□ -1.98
CD40P25942 Y_RNA.674-201ENST00000516362 113 ntBASIC2.71□□□□□ -1.98
CD40P25942 RNU6-1337P-201ENST00000516525 95 ntBASIC2.71□□□□□ -1.98
CD40P25942 RNU6-182P-201ENST00000516970 105 ntBASIC2.71□□□□□ -1.98
CD40P25942 SNORA31.26-201ENST00000517250 137 ntBASIC2.71□□□□□ -1.98
CD40P25942 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CD40P25942 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.71□□□□□ -1.98
CD40P25942 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CD40P25942 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CD40P25942 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.7□□□□□ -1.98
CD40P25942 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CD40P25942 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CD40P25942 Y_RNA.99-201ENST00000363138 105 ntBASIC2.7□□□□□ -1.98
CD40P25942 Y_RNA.287-201ENST00000364853 94 ntBASIC2.7□□□□□ -1.98
CD40P25942 SNORA72.4-201ENST00000384174 132 ntBASIC2.7□□□□□ -1.98
CD40P25942 Y_RNA.456-201ENST00000384232 111 ntBASIC2.7□□□□□ -1.98
CD40P25942 RNU6-1072P-201ENST00000384703 107 ntBASIC2.7□□□□□ -1.98
CD40P25942 RNU6-443P-201ENST00000384780 107 ntBASIC2.7□□□□□ -1.98
CD40P25942 MTCO2P33-201ENST00000402100 465 ntBASIC2.7□□□□□ -1.98
CD40P25942 MIR1253-201ENST00000408273 105 ntBASIC2.7□□□□□ -1.98
CD40P25942 Y_RNA.793-201ENST00000411222 111 ntBASIC2.7□□□□□ -1.98
CD40P25942 PIGPP3-201ENST00000425307 415 ntBASIC2.7□□□□□ -1.98
CD40P25942 AP001486.1-201ENST00000463339 476 ntBASIC2.7□□□□□ -1.98
CD40P25942 RPS27P22-201ENST00000478056 241 ntBASIC2.7□□□□□ -1.98
CD40P25942 AC008885.1-201ENST00000514930 301 ntBASIC2.7□□□□□ -1.98
CD40P25942 RNY3P16-201ENST00000516338 101 ntBASIC2.7□□□□□ -1.98
CD40P25942 AL078604.3-201ENST00000615580 211 ntBASIC2.7□□□□□ -1.98
CD40P25942 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.7□□□□□ -1.98
CD40P25942 AC073476.4-201ENST00000628409 72 ntBASIC2.7□□□□□ -1.98
CD40P25942 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CD40P25942 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
CD40P25942 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
CD40P25942 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CD40P25942 AC093010.3-201ENST00000570269 15214 ntBASIC2.7□□□□□ -1.98
CD40P25942 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.69□□□□□ -1.98
CD40P25942 AC245060.5-201ENST00000610778 3293 ntBASIC2.69□□□□□ -1.98
CD40P25942 AL356292.1-201ENST00000283110 373 ntBASIC2.69□□□□□ -1.98
CD40P25942 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CD40P25942 Y_RNA.308-201ENST00000365043 101 ntBASIC2.69□□□□□ -1.98
CD40P25942 SNORD116-13-201ENST00000384408 92 ntBASIC2.69□□□□□ -1.98
CD40P25942 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
CD40P25942 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.69□□□□□ -1.98
CD40P25942 AC060773.1-201ENST00000421698 310 ntBASIC2.69□□□□□ -1.98
CD40P25942 AC244505.4-201ENST00000434905 287 ntBASIC2.69□□□□□ -1.98
CD40P25942 SSXP5-201ENST00000443473 287 ntBASIC2.69□□□□□ -1.98
CD40P25942 HSPE1P13-201ENST00000451143 297 ntBASIC2.69□□□□□ -1.98
CD40P25942 RPS20P10-201ENST00000451209 253 ntBASIC2.69□□□□□ -1.98
CD40P25942 NDUFB9P3-201ENST00000521269 501 ntBASIC2.69□□□□□ -1.98
CD40P25942 AP005660.1-201ENST00000522972 293 ntBASIC2.69□□□□□ -1.98
CD40P25942 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.69□□□□□ -1.98
CD40P25942 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.69□□□□□ -1.98
CD40P25942 AC004792.1-201ENST00000614523 137 ntBASIC2.69□□□□□ -1.98
CD40P25942 AL365265.1-201ENST00000621045 234 ntBASIC2.69□□□□□ -1.98
CD40P25942 AC006435.5-201ENST00000624486 112 ntBASIC2.69□□□□□ -1.98
CD40P25942 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.69□□□□□ -1.98
CD40P25942 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.69□□□□□ -1.98
CD40P25942 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CD40P25942 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CD40P25942 AL159152.1-201ENST00000635019 2587 ntBASIC2.68□□□□□ -1.98
CD40P25942 SNORA71.1-201ENST00000364523 117 ntBASIC2.68□□□□□ -1.98
CD40P25942 Y_RNA.262-201ENST00000364641 102 ntBASIC2.68□□□□□ -1.98
CD40P25942 RNU6-923P-201ENST00000364753 107 ntBASIC2.68□□□□□ -1.98
CD40P25942 Y_RNA.304-201ENST00000365011 112 ntBASIC2.68□□□□□ -1.98
CD40P25942 AC009310.1-201ENST00000414414 451 ntBASIC2.68□□□□□ -1.98
CD40P25942 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.68□□□□□ -1.98
CD40P25942 CR769767.1-201ENST00000436337 346 ntBASIC2.68□□□□□ -1.98
CD40P25942 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.68□□□□□ -1.98
CD40P25942 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.68□□□□□ -1.98
CD40P25942 RNU6-63P-201ENST00000516690 95 ntBASIC2.68□□□□□ -1.98
CD40P25942 AC087441.2-201ENST00000529141 262 ntBASIC2.68□□□□□ -1.98
CD40P25942 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.68□□□□□ -1.98
CD40P25942 CBX3P4-201ENST00000538909 354 ntBASIC2.68□□□□□ -1.98
CD40P25942 Z83818.1-201ENST00000603584 150 ntBASIC2.68□□□□□ -1.98
CD40P25942 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.68□□□□□ -1.98
CD40P25942 AC013791.1-201ENST00000616619 62 ntBASIC2.68□□□□□ -1.98
CD40P25942 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.68□□□□□ -1.98
CD40P25942 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CD40P25942 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CD40P25942 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
CD40P25942 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
CD40P25942 SNORA38-201ENST00000363946 132 ntBASIC2.67□□□□□ -1.98
CD40P25942 SNORD114-6-201ENST00000364393 72 ntBASIC2.67□□□□□ -1.98
CD40P25942 RNU1-91P-201ENST00000364746 163 ntBASIC2.67□□□□□ -1.98
CD40P25942 RNU6-160P-201ENST00000384591 107 ntBASIC2.67□□□□□ -1.98
CD40P25942 EDDM3CP-201ENST00000415977 425 ntBASIC2.67□□□□□ -1.98
CD40P25942 HMGN2P34-201ENST00000437647 269 ntBASIC2.67□□□□□ -1.98
CD40P25942 HSPE1P21-201ENST00000438283 308 ntBASIC2.67□□□□□ -1.98
CD40P25942 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.67□□□□□ -1.98
CD40P25942 AC098479.1-201ENST00000609225 154 ntBASIC2.67□□□□□ -1.98
CD40P25942 U2.15-201ENST00000611544 191 ntBASIC2.67□□□□□ -1.98
CD40P25942 U2.16-201ENST00000613119 191 ntBASIC2.67□□□□□ -1.98
CD40P25942 AC022202.1-201ENST00000613515 211 ntBASIC2.67□□□□□ -1.98
CD40P25942 U2.12-201ENST00000613778 191 ntBASIC2.67□□□□□ -1.98
CD40P25942 U2.20-201ENST00000613956 192 ntBASIC2.67□□□□□ -1.98
CD40P25942 U2.9-201ENST00000615427 191 ntBASIC2.67□□□□□ -1.98
CD40P25942 U2.11-201ENST00000616345 191 ntBASIC2.67□□□□□ -1.98
CD40P25942 U2.2-201ENST00000616535 191 ntBASIC2.67□□□□□ -1.98
CD40P25942 U2.3-201ENST00000617785 191 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms