Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 RPL23AP63-201ENST00000498752 471 ntBASIC1.93□□□□□ -2.1
CHMP24386 HMGN1P13-201ENST00000505795 138 ntBASIC1.93□□□□□ -2.1
CHMP24386 Y_RNA.702-201ENST00000516843 96 ntBASIC1.93□□□□□ -2.1
CHMP24386 RNA5SP364-201ENST00000516938 78 ntBASIC1.93□□□□□ -2.1
CHMP24386 RNA5SP437-201ENST00000517249 129 ntBASIC1.93□□□□□ -2.1
CHMP24386 CYCSP23-201ENST00000519781 313 ntBASIC1.93□□□□□ -2.1
CHMP24386 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.93□□□□□ -2.1
CHMP24386 AL355375.2-201ENST00000574825 175 ntBASIC1.93□□□□□ -2.1
CHMP24386 AC104260.1-201ENST00000616660 539 ntBASIC1.93□□□□□ -2.1
CHMP24386 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
CHMP24386 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.93□□□□□ -2.1
CHMP24386 ZNF355P-201ENST00000427301 3216 ntBASIC1.92□□□□□ -2.1
CHMP24386 RNU6-661P-201ENST00000362409 107 ntBASIC1.92□□□□□ -2.1
CHMP24386 Y_RNA.356-201ENST00000365475 113 ntBASIC1.92□□□□□ -2.1
CHMP24386 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CHMP24386 RNY4P36-201ENST00000391116 96 ntBASIC1.92□□□□□ -2.1
CHMP24386 RNA5SP467-201ENST00000391274 118 ntBASIC1.92□□□□□ -2.1
CHMP24386 HSPE1P9-201ENST00000440046 311 ntBASIC1.92□□□□□ -2.1
CHMP24386 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.92□□□□□ -2.1
CHMP24386 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.92□□□□□ -2.1
CHMP24386 RPL36AP21-201ENST00000490372 323 ntBASIC1.92□□□□□ -2.1
CHMP24386 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.92□□□□□ -2.1
CHMP24386 AC105758.1-201ENST00000506038 399 ntBASIC1.92□□□□□ -2.1
CHMP24386 RNU6-470P-201ENST00000515954 104 ntBASIC1.92□□□□□ -2.1
CHMP24386 SUB1P3-201ENST00000564581 315 ntBASIC1.92□□□□□ -2.1
CHMP24386 AC012493.3-201ENST00000604494 112 ntBASIC1.92□□□□□ -2.1
CHMP24386 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.92□□□□□ -2.1
CHMP24386 AL357075.2-201ENST00000614906 189 ntBASIC1.92□□□□□ -2.1
CHMP24386 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.92□□□□□ -2.1
CHMP24386 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
CHMP24386 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CHMP24386 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CHMP24386 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.91□□□□□ -2.1
CHMP24386 SNORD114-1-201ENST00000362705 72 ntBASIC1.91□□□□□ -2.1
CHMP24386 RNU6-1145P-201ENST00000384246 107 ntBASIC1.91□□□□□ -2.1
CHMP24386 SNORA64-201ENST00000384674 134 ntBASIC1.91□□□□□ -2.1
CHMP24386 SNORA69.1-201ENST00000390904 137 ntBASIC1.91□□□□□ -2.1
CHMP24386 SUMO2P12-201ENST00000405924 140 ntBASIC1.91□□□□□ -2.1
CHMP24386 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.91□□□□□ -2.1
CHMP24386 TOMM22P2-201ENST00000430735 237 ntBASIC1.91□□□□□ -2.1
CHMP24386 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CHMP24386 HMGB3P17-201ENST00000504195 649 ntBASIC1.91□□□□□ -2.1
CHMP24386 SNORA44.1-201ENST00000517031 108 ntBASIC1.91□□□□□ -2.1
CHMP24386 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.91□□□□□ -2.1
CHMP24386 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.91□□□□□ -2.1
CHMP24386 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
CHMP24386 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
CHMP24386 AC073544.1-201ENST00000600110 1595 ntBASIC1.9□□□□□ -2.1
CHMP24386 SNORA63D-201ENST00000364359 132 ntBASIC1.9□□□□□ -2.11
CHMP24386 RNY3P14-201ENST00000384309 102 ntBASIC1.9□□□□□ -2.11
CHMP24386 SNORD116-29-201ENST00000384516 83 ntBASIC1.9□□□□□ -2.11
CHMP24386 Y_RNA.529-201ENST00000384586 119 ntBASIC1.9□□□□□ -2.11
CHMP24386 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
CHMP24386 HSPE1P21-201ENST00000438283 308 ntBASIC1.9□□□□□ -2.11
CHMP24386 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.9□□□□□ -2.11
CHMP24386 HMGN2P23-201ENST00000456759 269 ntBASIC1.9□□□□□ -2.11
CHMP24386 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CHMP24386 RN7SKP49-201ENST00000516675 260 ntBASIC1.9□□□□□ -2.11
CHMP24386 AC027419.1-201ENST00000522976 328 ntBASIC1.9□□□□□ -2.11
CHMP24386 AP001094.1-201ENST00000579805 193 ntBASIC1.9□□□□□ -2.11
CHMP24386 AC080078.3-201ENST00000605407 463 ntBASIC1.9□□□□□ -2.11
CHMP24386 AC084781.2-201ENST00000615568 161 ntBASIC1.9□□□□□ -2.11
CHMP24386 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.89□□□□□ -2.11
CHMP24386 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.89□□□□□ -2.11
CHMP24386 RNU6-414P-201ENST00000363705 104 ntBASIC1.89□□□□□ -2.11
CHMP24386 RNU6-1264P-201ENST00000383891 107 ntBASIC1.89□□□□□ -2.11
CHMP24386 RNU6-318P-201ENST00000384283 103 ntBASIC1.89□□□□□ -2.11
CHMP24386 MIR504-201ENST00000385065 83 ntBASIC1.89□□□□□ -2.11
CHMP24386 MIR30A-201ENST00000385092 71 ntBASIC1.89□□□□□ -2.11
CHMP24386 RNU6-1186P-201ENST00000410429 97 ntBASIC1.89□□□□□ -2.11
CHMP24386 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.89□□□□□ -2.11
CHMP24386 MTCO2P27-201ENST00000420740 428 ntBASIC1.89□□□□□ -2.11
CHMP24386 PCNPP5-201ENST00000452246 481 ntBASIC1.89□□□□□ -2.11
CHMP24386 ELOCP24-201ENST00000456370 334 ntBASIC1.89□□□□□ -2.11
CHMP24386 AC112492.4-201ENST00000456549 352 ntBASIC1.89□□□□□ -2.11
CHMP24386 Y_RNA.632-201ENST00000459189 102 ntBASIC1.89□□□□□ -2.11
CHMP24386 RNU7-169P-201ENST00000459456 61 ntBASIC1.89□□□□□ -2.11
CHMP24386 AC025465.3-201ENST00000510570 311 ntBASIC1.89□□□□□ -2.11
CHMP24386 RNA5SP481-201ENST00000516814 122 ntBASIC1.89□□□□□ -2.11
CHMP24386 RNU7-4P-201ENST00000516961 62 ntBASIC1.89□□□□□ -2.11
CHMP24386 Y_RNA.718-201ENST00000517110 102 ntBASIC1.89□□□□□ -2.11
CHMP24386 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.89□□□□□ -2.11
CHMP24386 AL137100.2-201ENST00000555786 315 ntBASIC1.89□□□□□ -2.11
CHMP24386 AC022432.1-201ENST00000595739 310 ntBASIC1.89□□□□□ -2.11
CHMP24386 AL359075.3-201ENST00000613288 217 ntBASIC1.89□□□□□ -2.11
CHMP24386 MIR6715A-201ENST00000615929 79 ntBASIC1.89□□□□□ -2.11
CHMP24386 AC087588.2-201ENST00000617667 426 ntBASIC1.89□□□□□ -2.11
CHMP24386 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
CHMP24386 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.89□□□□□ -2.11
CHMP24386 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CHMP24386 RNU6-1301P-201ENST00000362724 104 ntBASIC1.88□□□□□ -2.11
CHMP24386 Y_RNA.67-201ENST00000362870 100 ntBASIC1.88□□□□□ -2.11
CHMP24386 Y_RNA.70-201ENST00000362886 110 ntBASIC1.88□□□□□ -2.11
CHMP24386 Y_RNA.263-201ENST00000364659 114 ntBASIC1.88□□□□□ -2.11
CHMP24386 Y_RNA.314-201ENST00000365114 102 ntBASIC1.88□□□□□ -2.11
CHMP24386 Y_RNA.498-201ENST00000384460 102 ntBASIC1.88□□□□□ -2.11
CHMP24386 Y_RNA.592-201ENST00000410274 109 ntBASIC1.88□□□□□ -2.11
CHMP24386 Y_RNA.605-201ENST00000410577 105 ntBASIC1.88□□□□□ -2.11
CHMP24386 ELOCP21-201ENST00000412558 336 ntBASIC1.88□□□□□ -2.11
CHMP24386 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 163.7 ms