Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 RNU6-479P-201ENST00000516348 105 ntBASIC2.35□□□□□ -2.03
TNFRSF1BP20333 RNU6-107P-201ENST00000516643 102 ntBASIC2.35□□□□□ -2.03
TNFRSF1BP20333 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.35□□□□□ -2.03
TNFRSF1BP20333 SCARNA17.4-201ENST00000614296 143 ntBASIC2.35□□□□□ -2.03
TNFRSF1BP20333 AC008873.1-201ENST00000625051 138 ntBASIC2.35□□□□□ -2.03
TNFRSF1BP20333 AL137790.1-201ENST00000634283 177 ntBASIC2.35□□□□□ -2.03
TNFRSF1BP20333 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
TNFRSF1BP20333 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
TNFRSF1BP20333 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
TNFRSF1BP20333 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.34□□□□□ -2.03
TNFRSF1BP20333 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
TNFRSF1BP20333 Y_RNA.8-201ENST00000362353 102 ntBASIC2.34□□□□□ -2.03
TNFRSF1BP20333 SNORD32B-201ENST00000364460 84 ntBASIC2.34□□□□□ -2.03
TNFRSF1BP20333 Y_RNA.398-201ENST00000383952 99 ntBASIC2.34□□□□□ -2.03
TNFRSF1BP20333 RNU6-1117P-201ENST00000384525 104 ntBASIC2.34□□□□□ -2.03
TNFRSF1BP20333 AC009963.1-201ENST00000417265 157 ntBASIC2.34□□□□□ -2.03
TNFRSF1BP20333 AC024067.1-201ENST00000426199 223 ntBASIC2.34□□□□□ -2.03
TNFRSF1BP20333 AC091021.1-201ENST00000468051 388 ntBASIC2.34□□□□□ -2.03
TNFRSF1BP20333 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.34□□□□□ -2.03
TNFRSF1BP20333 RNU1-117P-201ENST00000517041 158 ntBASIC2.34□□□□□ -2.03
TNFRSF1BP20333 AP002001.1-203ENST00000534002 267 ntBASIC2.34□□□□□ -2.03
TNFRSF1BP20333 MRPS18CP4-201ENST00000535821 231 ntBASIC2.34□□□□□ -2.03
TNFRSF1BP20333 RPL21P9-201ENST00000556149 474 ntBASIC2.34□□□□□ -2.03
TNFRSF1BP20333 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.34□□□□□ -2.03
TNFRSF1BP20333 MIR5092-201ENST00000583139 88 ntBASIC2.34□□□□□ -2.03
TNFRSF1BP20333 AC093732.2-201ENST00000607950 274 ntBASIC2.34□□□□□ -2.03
TNFRSF1BP20333 AL137847.3-201ENST00000611521 109 ntBASIC2.34□□□□□ -2.03
TNFRSF1BP20333 AC010297.1-201ENST00000623948 149 ntBASIC2.34□□□□□ -2.03
TNFRSF1BP20333 AC090517.3-201ENST00000625170 141 ntBASIC2.34□□□□□ -2.03
TNFRSF1BP20333 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
TNFRSF1BP20333 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
TNFRSF1BP20333 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
TNFRSF1BP20333 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
TNFRSF1BP20333 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
TNFRSF1BP20333 MIR6073-201ENST00000352083 89 ntBASIC2.33□□□□□ -2.04
TNFRSF1BP20333 U3.8-201ENST00000363675 217 ntBASIC2.33□□□□□ -2.04
TNFRSF1BP20333 Y_RNA.292-201ENST00000364904 97 ntBASIC2.33□□□□□ -2.04
TNFRSF1BP20333 Y_RNA.435-201ENST00000384095 112 ntBASIC2.33□□□□□ -2.04
TNFRSF1BP20333 RNU6-1289P-201ENST00000384431 106 ntBASIC2.33□□□□□ -2.04
TNFRSF1BP20333 RNU6-959P-201ENST00000384671 107 ntBASIC2.33□□□□□ -2.04
TNFRSF1BP20333 SNORA12-201ENST00000391162 147 ntBASIC2.33□□□□□ -2.04
TNFRSF1BP20333 HMGN2P35-201ENST00000412164 270 ntBASIC2.33□□□□□ -2.04
TNFRSF1BP20333 MICF-203ENST00000432679 129 ntBASIC2.33□□□□□ -2.04
TNFRSF1BP20333 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.33□□□□□ -2.04
TNFRSF1BP20333 SNORD2.1-201ENST00000458762 69 ntBASIC2.33□□□□□ -2.04
TNFRSF1BP20333 Y_RNA.638-201ENST00000459374 113 ntBASIC2.33□□□□□ -2.04
TNFRSF1BP20333 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.33□□□□□ -2.04
TNFRSF1BP20333 RAC1P5-201ENST00000512182 576 ntBASIC2.33□□□□□ -2.04
TNFRSF1BP20333 RNU2-12P-201ENST00000517216 168 ntBASIC2.33□□□□□ -2.04
TNFRSF1BP20333 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
TNFRSF1BP20333 MIR3944-201ENST00000581277 108 ntBASIC2.33□□□□□ -2.04
TNFRSF1BP20333 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.33□□□□□ -2.04
TNFRSF1BP20333 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
TNFRSF1BP20333 AC073349.3-201ENST00000617616 186 ntBASIC2.33□□□□□ -2.04
TNFRSF1BP20333 AC002064.3-201ENST00000623448 346 ntBASIC2.33□□□□□ -2.04
TNFRSF1BP20333 MIR7157-201ENST00000635801 60 ntBASIC2.33□□□□□ -2.04
TNFRSF1BP20333 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
TNFRSF1BP20333 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.32□□□□□ -2.04
TNFRSF1BP20333 AC010329.5-201ENST00000623497 2174 ntBASIC2.32□□□□□ -2.04
TNFRSF1BP20333 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
TNFRSF1BP20333 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
TNFRSF1BP20333 MIR208A-201ENST00000362287 71 ntBASIC2.32□□□□□ -2.04
TNFRSF1BP20333 RNU4-80P-201ENST00000363200 141 ntBASIC2.32□□□□□ -2.04
TNFRSF1BP20333 SNORD46.1-201ENST00000364139 104 ntBASIC2.32□□□□□ -2.04
TNFRSF1BP20333 Y_RNA.233-201ENST00000364407 101 ntBASIC2.32□□□□□ -2.04
TNFRSF1BP20333 SNORD87-201ENST00000364849 89 ntBASIC2.32□□□□□ -2.04
TNFRSF1BP20333 RNU1-51P-201ENST00000365345 176 ntBASIC2.32□□□□□ -2.04
TNFRSF1BP20333 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
TNFRSF1BP20333 Y_RNA.441-201ENST00000384123 112 ntBASIC2.32□□□□□ -2.04
TNFRSF1BP20333 SNORA22C-201ENST00000384614 134 ntBASIC2.32□□□□□ -2.04
TNFRSF1BP20333 MIR128-1-201ENST00000384921 82 ntBASIC2.32□□□□□ -2.04
TNFRSF1BP20333 RNA5SP504-201ENST00000410676 117 ntBASIC2.32□□□□□ -2.04
TNFRSF1BP20333 RNU5E-9P-201ENST00000411164 104 ntBASIC2.32□□□□□ -2.04
TNFRSF1BP20333 RNU6-1199P-201ENST00000411249 104 ntBASIC2.32□□□□□ -2.04
TNFRSF1BP20333 AC105272.1-201ENST00000438604 198 ntBASIC2.32□□□□□ -2.04
TNFRSF1BP20333 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.32□□□□□ -2.04
TNFRSF1BP20333 RNU6-966P-201ENST00000516479 104 ntBASIC2.32□□□□□ -2.04
TNFRSF1BP20333 RNA5SP367-201ENST00000516557 118 ntBASIC2.32□□□□□ -2.04
TNFRSF1BP20333 AP005660.1-201ENST00000522972 293 ntBASIC2.32□□□□□ -2.04
TNFRSF1BP20333 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.32□□□□□ -2.04
TNFRSF1BP20333 AP001485.1-201ENST00000604799 199 ntBASIC2.32□□□□□ -2.04
TNFRSF1BP20333 AC108706.1-201ENST00000611053 297 ntBASIC2.32□□□□□ -2.04
TNFRSF1BP20333 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
TNFRSF1BP20333 AC073346.2-201ENST00000624724 2058 ntBASIC2.31□□□□□ -2.04
TNFRSF1BP20333 RNU6-1020P-201ENST00000363684 107 ntBASIC2.31□□□□□ -2.04
TNFRSF1BP20333 Y_RNA.217-201ENST00000364214 105 ntBASIC2.31□□□□□ -2.04
TNFRSF1BP20333 MIR586-201ENST00000385035 97 ntBASIC2.31□□□□□ -2.04
TNFRSF1BP20333 MIR9-1-201ENST00000385198 89 ntBASIC2.31□□□□□ -2.04
TNFRSF1BP20333 RNU6-1168P-201ENST00000390831 104 ntBASIC2.31□□□□□ -2.04
TNFRSF1BP20333 AL139095.1-201ENST00000404326 391 ntBASIC2.31□□□□□ -2.04
TNFRSF1BP20333 Y_RNA.597-201ENST00000410463 100 ntBASIC2.31□□□□□ -2.04
TNFRSF1BP20333 RNU2-52P-201ENST00000410680 190 ntBASIC2.31□□□□□ -2.04
TNFRSF1BP20333 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.31□□□□□ -2.04
TNFRSF1BP20333 RPS12P2-201ENST00000439728 269 ntBASIC2.31□□□□□ -2.04
TNFRSF1BP20333 Y_RNA.641-201ENST00000459414 105 ntBASIC2.31□□□□□ -2.04
TNFRSF1BP20333 AC140059.1-201ENST00000489238 361 ntBASIC2.31□□□□□ -2.04
TNFRSF1BP20333 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.31□□□□□ -2.04
TNFRSF1BP20333 Y_RNA.662-201ENST00000516028 97 ntBASIC2.31□□□□□ -2.04
TNFRSF1BP20333 RNU6-191P-201ENST00000516295 94 ntBASIC2.31□□□□□ -2.04
TNFRSF1BP20333 RNU5F-4P-201ENST00000516581 114 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms