Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.22□□□□□ -1.89
ITGA4P13612 SSXP5-201ENST00000443473 287 ntBASIC3.22□□□□□ -1.89
ITGA4P13612 SCARNA3-201ENST00000517097 143 ntBASIC3.22□□□□□ -1.89
ITGA4P13612 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.22□□□□□ -1.89
ITGA4P13612 AC107016.2-201ENST00000547968 190 ntBASIC3.22□□□□□ -1.89
ITGA4P13612 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.22□□□□□ -1.89
ITGA4P13612 MIR4753-201ENST00000585119 83 ntBASIC3.22□□□□□ -1.89
ITGA4P13612 AL133393.1-201ENST00000603277 287 ntBASIC3.22□□□□□ -1.89
ITGA4P13612 RNU2-4P-201ENST00000606190 192 ntBASIC3.22□□□□□ -1.89
ITGA4P13612 U2.15-201ENST00000611544 191 ntBASIC3.22□□□□□ -1.89
ITGA4P13612 U2.16-201ENST00000613119 191 ntBASIC3.22□□□□□ -1.89
ITGA4P13612 U2.12-201ENST00000613778 191 ntBASIC3.22□□□□□ -1.89
ITGA4P13612 U2.9-201ENST00000615427 191 ntBASIC3.22□□□□□ -1.89
ITGA4P13612 U2.11-201ENST00000616345 191 ntBASIC3.22□□□□□ -1.89
ITGA4P13612 U2.2-201ENST00000616535 191 ntBASIC3.22□□□□□ -1.89
ITGA4P13612 AC013791.1-201ENST00000616619 62 ntBASIC3.22□□□□□ -1.89
ITGA4P13612 U2.3-201ENST00000617785 191 ntBASIC3.22□□□□□ -1.89
ITGA4P13612 U2.19-201ENST00000618602 191 ntBASIC3.22□□□□□ -1.89
ITGA4P13612 RNU2-1-201ENST00000618664 191 ntBASIC3.22□□□□□ -1.89
ITGA4P13612 U2.6-201ENST00000619225 191 ntBASIC3.22□□□□□ -1.89
ITGA4P13612 U2.5-201ENST00000619465 191 ntBASIC3.22□□□□□ -1.89
ITGA4P13612 U2.10-201ENST00000620268 191 ntBASIC3.22□□□□□ -1.89
ITGA4P13612 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ITGA4P13612 AL355596.1-201ENST00000565399 3996 ntBASIC3.22□□□□□ -1.89
ITGA4P13612 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ITGA4P13612 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
ITGA4P13612 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
ITGA4P13612 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
ITGA4P13612 Y_RNA.7-201ENST00000362352 102 ntBASIC3.21□□□□□ -1.9
ITGA4P13612 Y_RNA.341-201ENST00000365341 102 ntBASIC3.21□□□□□ -1.9
ITGA4P13612 Y_RNA.368-201ENST00000365547 113 ntBASIC3.21□□□□□ -1.9
ITGA4P13612 RNU6-851P-201ENST00000384565 107 ntBASIC3.21□□□□□ -1.9
ITGA4P13612 MTCO2P33-201ENST00000402100 465 ntBASIC3.21□□□□□ -1.9
ITGA4P13612 RNA5SP274-201ENST00000410484 108 ntBASIC3.21□□□□□ -1.9
ITGA4P13612 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.21□□□□□ -1.9
ITGA4P13612 RNU7-57P-201ENST00000459540 60 ntBASIC3.21□□□□□ -1.9
ITGA4P13612 AC090515.1-201ENST00000465295 476 ntBASIC3.21□□□□□ -1.9
ITGA4P13612 AP004217.1-201ENST00000480579 346 ntBASIC3.21□□□□□ -1.9
ITGA4P13612 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.21□□□□□ -1.9
ITGA4P13612 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.21□□□□□ -1.9
ITGA4P13612 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.21□□□□□ -1.9
ITGA4P13612 MTND5P41-201ENST00000517498 206 ntBASIC3.21□□□□□ -1.9
ITGA4P13612 AC109329.2-201ENST00000519658 482 ntBASIC3.21□□□□□ -1.9
ITGA4P13612 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.21□□□□□ -1.9
ITGA4P13612 MIR3910-1-201ENST00000580936 111 ntBASIC3.21□□□□□ -1.9
ITGA4P13612 AC105245.1-201ENST00000581934 244 ntBASIC3.21□□□□□ -1.9
ITGA4P13612 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
ITGA4P13612 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
ITGA4P13612 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
ITGA4P13612 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
ITGA4P13612 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.2□□□□□ -1.9
ITGA4P13612 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.2□□□□□ -1.9
ITGA4P13612 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
ITGA4P13612 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.2□□□□□ -1.9
ITGA4P13612 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ITGA4P13612 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ITGA4P13612 Y_RNA.238-201ENST00000364441 102 ntBASIC3.2□□□□□ -1.9
ITGA4P13612 SNORD14D-201ENST00000384390 87 ntBASIC3.2□□□□□ -1.9
ITGA4P13612 MIR181B1-201ENST00000385240 110 ntBASIC3.2□□□□□ -1.9
ITGA4P13612 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
ITGA4P13612 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.2□□□□□ -1.9
ITGA4P13612 RNU6-394P-201ENST00000410735 107 ntBASIC3.2□□□□□ -1.9
ITGA4P13612 RNU6-1135P-201ENST00000411083 103 ntBASIC3.2□□□□□ -1.9
ITGA4P13612 RNU5E-9P-201ENST00000411164 104 ntBASIC3.2□□□□□ -1.9
ITGA4P13612 AL135938.1-201ENST00000443141 297 ntBASIC3.2□□□□□ -1.9
ITGA4P13612 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.2□□□□□ -1.9
ITGA4P13612 SEM1P1-201ENST00000506694 209 ntBASIC3.2□□□□□ -1.9
ITGA4P13612 SNORA70.12-201ENST00000516084 153 ntBASIC3.2□□□□□ -1.9
ITGA4P13612 RNA5SP367-201ENST00000516557 118 ntBASIC3.2□□□□□ -1.9
ITGA4P13612 MIR3144-201ENST00000579460 79 ntBASIC3.2□□□□□ -1.9
ITGA4P13612 AC025754.2-201ENST00000606491 432 ntBASIC3.2□□□□□ -1.9
ITGA4P13612 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.2□□□□□ -1.9
ITGA4P13612 MIR7157-201ENST00000635801 60 ntBASIC3.2□□□□□ -1.9
ITGA4P13612 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.2□□□□□ -1.9
ITGA4P13612 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
ITGA4P13612 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.2□□□□□ -1.9
ITGA4P13612 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.19□□□□□ -1.9
ITGA4P13612 Y_RNA.124-201ENST00000363339 93 ntBASIC3.19□□□□□ -1.9
ITGA4P13612 RNU4-10P-201ENST00000364383 140 ntBASIC3.19□□□□□ -1.9
ITGA4P13612 Y_RNA.310-201ENST00000365063 113 ntBASIC3.19□□□□□ -1.9
ITGA4P13612 Y_RNA.456-201ENST00000384232 111 ntBASIC3.19□□□□□ -1.9
ITGA4P13612 SNORA19-201ENST00000384737 128 ntBASIC3.19□□□□□ -1.9
ITGA4P13612 U6atac.2-201ENST00000408644 118 ntBASIC3.19□□□□□ -1.9
ITGA4P13612 AC074290.1-201ENST00000448883 135 ntBASIC3.19□□□□□ -1.9
ITGA4P13612 RPS29P12-201ENST00000460178 152 ntBASIC3.19□□□□□ -1.9
ITGA4P13612 AC114982.1-201ENST00000469402 321 ntBASIC3.19□□□□□ -1.9
ITGA4P13612 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.19□□□□□ -1.9
ITGA4P13612 AC091826.1-201ENST00000514065 313 ntBASIC3.19□□□□□ -1.9
ITGA4P13612 RNU6-965P-201ENST00000516721 96 ntBASIC3.19□□□□□ -1.9
ITGA4P13612 AC018630.3-201ENST00000542637 96 ntBASIC3.19□□□□□ -1.9
ITGA4P13612 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.19□□□□□ -1.9
ITGA4P13612 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ITGA4P13612 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ITGA4P13612 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
ITGA4P13612 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.18□□□□□ -1.9
ITGA4P13612 AC096644.4-201ENST00000563417 2912 ntBASIC3.18□□□□□ -1.9
ITGA4P13612 Y_RNA.293-201ENST00000364908 93 ntBASIC3.18□□□□□ -1.9
ITGA4P13612 SNORA9.2-201ENST00000365361 133 ntBASIC3.18□□□□□ -1.9
ITGA4P13612 Y_RNA.398-201ENST00000383952 99 ntBASIC3.18□□□□□ -1.9
ITGA4P13612 RNU6-975P-201ENST00000384296 105 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 145.5 ms