Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 SNORA16B-201ENST00000364674 135 ntBASIC2.13□□□□□ -2.07
PCNAP12004 RNU6-639P-201ENST00000384074 107 ntBASIC2.13□□□□□ -2.07
PCNAP12004 Y_RNA.458-201ENST00000384240 102 ntBASIC2.13□□□□□ -2.07
PCNAP12004 Y_RNA.471-201ENST00000384312 102 ntBASIC2.13□□□□□ -2.07
PCNAP12004 Y_RNA.498-201ENST00000384460 102 ntBASIC2.13□□□□□ -2.07
PCNAP12004 MIR597-201ENST00000384968 97 ntBASIC2.13□□□□□ -2.07
PCNAP12004 AL590004.1-201ENST00000405321 300 ntBASIC2.13□□□□□ -2.07
PCNAP12004 RNU2-20P-201ENST00000410425 191 ntBASIC2.13□□□□□ -2.07
PCNAP12004 SDAD1P3-201ENST00000427380 333 ntBASIC2.13□□□□□ -2.07
PCNAP12004 RAB28P5-201ENST00000427490 651 ntBASIC2.13□□□□□ -2.07
PCNAP12004 RPEP5-201ENST00000441137 268 ntBASIC2.13□□□□□ -2.07
PCNAP12004 MRPS17P9-201ENST00000511924 393 ntBASIC2.13□□□□□ -2.07
PCNAP12004 SCARNA15.1-201ENST00000516384 125 ntBASIC2.13□□□□□ -2.07
PCNAP12004 RNA5SP137-201ENST00000516833 135 ntBASIC2.13□□□□□ -2.07
PCNAP12004 AP005660.1-201ENST00000522972 293 ntBASIC2.13□□□□□ -2.07
PCNAP12004 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.13□□□□□ -2.07
PCNAP12004 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.13□□□□□ -2.07
PCNAP12004 AC002984.1-201ENST00000591692 448 ntBASIC2.13□□□□□ -2.07
PCNAP12004 AC008749.1-201ENST00000597650 306 ntBASIC2.13□□□□□ -2.07
PCNAP12004 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.13□□□□□ -2.07
PCNAP12004 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.13□□□□□ -2.07
PCNAP12004 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
PCNAP12004 U3.8-201ENST00000363675 217 ntBASIC2.12□□□□□ -2.07
PCNAP12004 HMGN2P39-201ENST00000398005 273 ntBASIC2.12□□□□□ -2.07
PCNAP12004 AL079342.1-201ENST00000401460 267 ntBASIC2.12□□□□□ -2.07
PCNAP12004 RNU6-101P-201ENST00000410323 104 ntBASIC2.12□□□□□ -2.07
PCNAP12004 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.12□□□□□ -2.07
PCNAP12004 Y_RNA.715-201ENST00000517082 110 ntBASIC2.12□□□□□ -2.07
PCNAP12004 AC087441.2-201ENST00000529141 262 ntBASIC2.12□□□□□ -2.07
PCNAP12004 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.12□□□□□ -2.07
PCNAP12004 MIR6852-201ENST00000621699 66 ntBASIC2.12□□□□□ -2.07
PCNAP12004 MIR6132-201ENST00000622083 109 ntBASIC2.12□□□□□ -2.07
PCNAP12004 AC006001.4-201ENST00000622243 395 ntBASIC2.12□□□□□ -2.07
PCNAP12004 AC130454.1-201ENST00000622948 401 ntBASIC2.12□□□□□ -2.07
PCNAP12004 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.12□□□□□ -2.07
PCNAP12004 AC245060.5-201ENST00000610778 3293 ntBASIC2.12□□□□□ -2.07
PCNAP12004 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.11□□□□□ -2.07
PCNAP12004 RNA5SP493-201ENST00000364115 91 ntBASIC2.11□□□□□ -2.07
PCNAP12004 Y_RNA.455-201ENST00000384230 98 ntBASIC2.11□□□□□ -2.07
PCNAP12004 MIR606-201ENST00000384851 96 ntBASIC2.11□□□□□ -2.07
PCNAP12004 MIR518A2-201ENST00000384966 87 ntBASIC2.11□□□□□ -2.07
PCNAP12004 RNU4-53P-201ENST00000410828 140 ntBASIC2.11□□□□□ -2.07
PCNAP12004 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
PCNAP12004 U8.20-201ENST00000459445 131 ntBASIC2.11□□□□□ -2.07
PCNAP12004 AC114982.1-201ENST00000469402 321 ntBASIC2.11□□□□□ -2.07
PCNAP12004 AC093852.1-201ENST00000503587 266 ntBASIC2.11□□□□□ -2.07
PCNAP12004 AC067942.3-201ENST00000512025 362 ntBASIC2.11□□□□□ -2.07
PCNAP12004 AC074133.1-201ENST00000515696 183 ntBASIC2.11□□□□□ -2.07
PCNAP12004 SNORA31.25-201ENST00000517242 134 ntBASIC2.11□□□□□ -2.07
PCNAP12004 AC022616.4-201ENST00000522985 181 ntBASIC2.11□□□□□ -2.07
PCNAP12004 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.11□□□□□ -2.07
PCNAP12004 AC113195.1-201ENST00000579952 141 ntBASIC2.11□□□□□ -2.07
PCNAP12004 RAC1P9-201ENST00000604990 392 ntBASIC2.11□□□□□ -2.07
PCNAP12004 AC009831.4-201ENST00000620744 325 ntBASIC2.11□□□□□ -2.07
PCNAP12004 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.11□□□□□ -2.07
PCNAP12004 MIR6873-201ENST00000622788 63 ntBASIC2.11□□□□□ -2.07
PCNAP12004 snoZ196.1-201ENST00000625269 89 ntBASIC2.11□□□□□ -2.07
PCNAP12004 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.11□□□□□ -2.07
PCNAP12004 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
PCNAP12004 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
PCNAP12004 RNU4-82P-201ENST00000362443 140 ntBASIC2.1□□□□□ -2.07
PCNAP12004 RNU6-23P-201ENST00000363283 107 ntBASIC2.1□□□□□ -2.07
PCNAP12004 Y_RNA.153-201ENST00000363615 91 ntBASIC2.1□□□□□ -2.07
PCNAP12004 RNU4-50P-201ENST00000364361 141 ntBASIC2.1□□□□□ -2.07
PCNAP12004 RNU6-20P-201ENST00000384106 107 ntBASIC2.1□□□□□ -2.07
PCNAP12004 RNU6-160P-201ENST00000384591 107 ntBASIC2.1□□□□□ -2.07
PCNAP12004 MIR1283-2-201ENST00000408621 87 ntBASIC2.1□□□□□ -2.07
PCNAP12004 MIR1185-2-201ENST00000408687 86 ntBASIC2.1□□□□□ -2.07
PCNAP12004 AC016909.1-201ENST00000415916 166 ntBASIC2.1□□□□□ -2.07
PCNAP12004 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.1□□□□□ -2.07
PCNAP12004 AL357134.1-201ENST00000445848 426 ntBASIC2.1□□□□□ -2.07
PCNAP12004 RNU6-948P-201ENST00000516374 107 ntBASIC2.1□□□□□ -2.07
PCNAP12004 RNU6-764P-201ENST00000516396 105 ntBASIC2.1□□□□□ -2.07
PCNAP12004 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.1□□□□□ -2.07
PCNAP12004 AL442663.2-201ENST00000554385 511 ntBASIC2.1□□□□□ -2.07
PCNAP12004 MIR3169-201ENST00000578032 83 ntBASIC2.1□□□□□ -2.07
PCNAP12004 AC005034.5-201ENST00000604219 466 ntBASIC2.1□□□□□ -2.07
PCNAP12004 AL121655.1-201ENST00000605811 308 ntBASIC2.1□□□□□ -2.07
PCNAP12004 AP000553.5-201ENST00000641933 54 ntBASIC2.1□□□□□ -2.07
PCNAP12004 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
PCNAP12004 RNU6-626P-201ENST00000363354 107 ntBASIC2.09□□□□□ -2.07
PCNAP12004 RNU6-454P-201ENST00000364292 107 ntBASIC2.09□□□□□ -2.07
PCNAP12004 SNORA63C-201ENST00000364578 129 ntBASIC2.09□□□□□ -2.07
PCNAP12004 AC117470.1-201ENST00000381974 330 ntBASIC2.09□□□□□ -2.07
PCNAP12004 RNU6-1264P-201ENST00000383891 107 ntBASIC2.09□□□□□ -2.07
PCNAP12004 RNU6-1235P-201ENST00000384559 107 ntBASIC2.09□□□□□ -2.07
PCNAP12004 Y_RNA.526-201ENST00000384572 110 ntBASIC2.09□□□□□ -2.07
PCNAP12004 MRPL35P1-201ENST00000404272 572 ntBASIC2.09□□□□□ -2.07
PCNAP12004 AL512604.1-201ENST00000404812 257 ntBASIC2.09□□□□□ -2.07
PCNAP12004 RNU6-985P-201ENST00000410182 104 ntBASIC2.09□□□□□ -2.07
PCNAP12004 RN7SKP284-201ENST00000411002 343 ntBASIC2.09□□□□□ -2.07
PCNAP12004 AC060773.1-201ENST00000421698 310 ntBASIC2.09□□□□□ -2.07
PCNAP12004 AC245102.2-201ENST00000448956 180 ntBASIC2.09□□□□□ -2.07
PCNAP12004 RNU6-498P-201ENST00000459468 107 ntBASIC2.09□□□□□ -2.07
PCNAP12004 AC008413.1-201ENST00000511864 177 ntBASIC2.09□□□□□ -2.07
PCNAP12004 RNU6-966P-201ENST00000516479 104 ntBASIC2.09□□□□□ -2.07
PCNAP12004 RNU6-1046P-201ENST00000516538 107 ntBASIC2.09□□□□□ -2.07
PCNAP12004 CYCSP23-201ENST00000519781 313 ntBASIC2.09□□□□□ -2.07
PCNAP12004 MIR4287-201ENST00000579398 78 ntBASIC2.09□□□□□ -2.07
PCNAP12004 AC006504.6-201ENST00000590142 199 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms