Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.87□□□□□ -2.27
CD28P10747 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.87□□□□□ -2.27
CD28P10747 Z82188.1-201ENST00000436709 154 ntBASIC0.87□□□□□ -2.27
CD28P10747 AL135790.2-201ENST00000437701 267 ntBASIC0.87□□□□□ -2.27
CD28P10747 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.87□□□□□ -2.27
CD28P10747 PCMTD1P1-201ENST00000455560 355 ntBASIC0.87□□□□□ -2.27
CD28P10747 SNORA31.10-201ENST00000516482 106 ntBASIC0.87□□□□□ -2.27
CD28P10747 AC024909.2-201ENST00000553035 286 ntBASIC0.87□□□□□ -2.27
CD28P10747 ZNF519P2-201ENST00000557032 169 ntBASIC0.87□□□□□ -2.27
CD28P10747 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.87□□□□□ -2.27
CD28P10747 MZT1P2-201ENST00000604387 248 ntBASIC0.87□□□□□ -2.27
CD28P10747 AL365434.2-201ENST00000607979 234 ntBASIC0.87□□□□□ -2.27
CD28P10747 AC021506.2-201ENST00000612354 169 ntBASIC0.87□□□□□ -2.27
CD28P10747 AL359075.3-201ENST00000613288 217 ntBASIC0.87□□□□□ -2.27
CD28P10747 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.87□□□□□ -2.27
CD28P10747 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.87□□□□□ -2.27
CD28P10747 MTND4P12-201ENST00000498999 1377 ntBASIC0.86□□□□□ -2.27
CD28P10747 Y_RNA.100-201ENST00000363141 102 ntBASIC0.86□□□□□ -2.27
CD28P10747 Y_RNA.319-201ENST00000365138 92 ntBASIC0.86□□□□□ -2.27
CD28P10747 RNU6-1080P-201ENST00000383982 107 ntBASIC0.86□□□□□ -2.27
CD28P10747 RNU6-17P-201ENST00000384245 107 ntBASIC0.86□□□□□ -2.27
CD28P10747 RNU6-18P-201ENST00000384527 107 ntBASIC0.86□□□□□ -2.27
CD28P10747 RNU6-1031P-201ENST00000384773 107 ntBASIC0.86□□□□□ -2.27
CD28P10747 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
CD28P10747 SNORA12.1-201ENST00000390873 148 ntBASIC0.86□□□□□ -2.27
CD28P10747 RNA5SP109-201ENST00000391010 116 ntBASIC0.86□□□□□ -2.27
CD28P10747 AL590002.1-201ENST00000406554 418 ntBASIC0.86□□□□□ -2.27
CD28P10747 MIR1253-201ENST00000408273 105 ntBASIC0.86□□□□□ -2.27
CD28P10747 AL590632.1-201ENST00000424289 371 ntBASIC0.86□□□□□ -2.27
CD28P10747 TOMM22P2-201ENST00000430735 237 ntBASIC0.86□□□□□ -2.27
CD28P10747 Z83846.1-201ENST00000446798 265 ntBASIC0.86□□□□□ -2.27
CD28P10747 RPS29P1-201ENST00000465274 159 ntBASIC0.86□□□□□ -2.27
CD28P10747 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.86□□□□□ -2.27
CD28P10747 RPS23P4-201ENST00000487908 423 ntBASIC0.86□□□□□ -2.27
CD28P10747 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.86□□□□□ -2.27
CD28P10747 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.86□□□□□ -2.27
CD28P10747 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.86□□□□□ -2.27
CD28P10747 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.86□□□□□ -2.27
CD28P10747 AC019288.1-201ENST00000557918 224 ntBASIC0.86□□□□□ -2.27
CD28P10747 CYP3A52P-201ENST00000563326 91 ntBASIC0.86□□□□□ -2.27
CD28P10747 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.86□□□□□ -2.27
CD28P10747 AC004584.2-201ENST00000570407 410 ntBASIC0.86□□□□□ -2.27
CD28P10747 MIR3664-201ENST00000579074 99 ntBASIC0.86□□□□□ -2.27
CD28P10747 MIR3672-201ENST00000584290 82 ntBASIC0.86□□□□□ -2.27
CD28P10747 FAM106DP-201ENST00000586416 501 ntBASIC0.86□□□□□ -2.27
CD28P10747 AC022432.1-201ENST00000595739 310 ntBASIC0.86□□□□□ -2.27
CD28P10747 AL050343.2-201ENST00000607338 280 ntBASIC0.86□□□□□ -2.27
CD28P10747 AC040896.1-201ENST00000613819 479 ntBASIC0.86□□□□□ -2.27
CD28P10747 RMST_2.1-201ENST00000617263 136 ntBASIC0.86□□□□□ -2.27
CD28P10747 AC009033.1-201ENST00000624279 431 ntBASIC0.86□□□□□ -2.27
CD28P10747 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.86□□□□□ -2.27
CD28P10747 AC099654.12-201ENST00000639868 649 ntBASIC0.86□□□□□ -2.27
CD28P10747 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
CD28P10747 RNU6-596P-201ENST00000365395 98 ntBASIC0.85□□□□□ -2.27
CD28P10747 MIR32-201ENST00000384965 70 ntBASIC0.85□□□□□ -2.27
CD28P10747 MIR618-201ENST00000385287 98 ntBASIC0.85□□□□□ -2.27
CD28P10747 RNU6-159P-201ENST00000391080 106 ntBASIC0.85□□□□□ -2.27
CD28P10747 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.85□□□□□ -2.27
CD28P10747 AC243428.1-201ENST00000421099 264 ntBASIC0.85□□□□□ -2.27
CD28P10747 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.85□□□□□ -2.27
CD28P10747 RNU7-34P-201ENST00000459394 64 ntBASIC0.85□□□□□ -2.27
CD28P10747 RPL39P38-201ENST00000467018 153 ntBASIC0.85□□□□□ -2.27
CD28P10747 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.85□□□□□ -2.27
CD28P10747 RPL30P10-201ENST00000488148 337 ntBASIC0.85□□□□□ -2.27
CD28P10747 RNU1-142P-201ENST00000516682 145 ntBASIC0.85□□□□□ -2.27
CD28P10747 RNU6-256P-201ENST00000516747 97 ntBASIC0.85□□□□□ -2.27
CD28P10747 Y_RNA.704-201ENST00000516851 102 ntBASIC0.85□□□□□ -2.27
CD28P10747 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.85□□□□□ -2.27
CD28P10747 POLR3GP2-201ENST00000588366 668 ntBASIC0.85□□□□□ -2.27
CD28P10747 AL929325.1-201ENST00000603096 117 ntBASIC0.85□□□□□ -2.27
CD28P10747 AC097065.2-201ENST00000608159 533 ntBASIC0.85□□□□□ -2.27
CD28P10747 U6.73-201ENST00000619194 103 ntBASIC0.85□□□□□ -2.27
CD28P10747 AC006504.8-201ENST00000621046 635 ntBASIC0.85□□□□□ -2.27
CD28P10747 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.85□□□□□ -2.27
CD28P10747 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.85□□□□□ -2.27
CD28P10747 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.85□□□□□ -2.27
CD28P10747 MIR6767-201ENST00000637302 66 ntBASIC0.85□□□□□ -2.27
CD28P10747 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.85□□□□□ -2.27
CD28P10747 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.84□□□□□ -2.27
CD28P10747 RNA5SP327-201ENST00000362494 101 ntBASIC0.84□□□□□ -2.27
CD28P10747 RNU6-873P-201ENST00000363833 107 ntBASIC0.84□□□□□ -2.27
CD28P10747 Y_RNA.414-201ENST00000384011 101 ntBASIC0.84□□□□□ -2.27
CD28P10747 SNORD116-2-201ENST00000384274 95 ntBASIC0.84□□□□□ -2.27
CD28P10747 RNU6-790P-201ENST00000384479 105 ntBASIC0.84□□□□□ -2.27
CD28P10747 SNORD116-6-201ENST00000384711 96 ntBASIC0.84□□□□□ -2.27
CD28P10747 MIR517A-201ENST00000385001 87 ntBASIC0.84□□□□□ -2.27
CD28P10747 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
CD28P10747 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.84□□□□□ -2.27
CD28P10747 PGBD4P5-201ENST00000445958 426 ntBASIC0.84□□□□□ -2.27
CD28P10747 RNU1-117P-201ENST00000517041 158 ntBASIC0.84□□□□□ -2.27
CD28P10747 RNA5SP454-201ENST00000517231 127 ntBASIC0.84□□□□□ -2.27
CD28P10747 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.84□□□□□ -2.27
CD28P10747 Y_RNA.38-201ENST00000362617 102 ntBASIC0.83□□□□□ -2.28
CD28P10747 RNU5F-3P-201ENST00000363767 117 ntBASIC0.83□□□□□ -2.28
CD28P10747 Y_RNA.194-201ENST00000363985 102 ntBASIC0.83□□□□□ -2.28
CD28P10747 Y_RNA.373-201ENST00000365600 103 ntBASIC0.83□□□□□ -2.28
CD28P10747 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.83□□□□□ -2.28
CD28P10747 SNORA70.7-201ENST00000384159 133 ntBASIC0.83□□□□□ -2.28
CD28P10747 MIR222-201ENST00000384992 110 ntBASIC0.83□□□□□ -2.28
CD28P10747 RNA5SP323-201ENST00000391094 133 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms