Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.26□□□□□ -2.37
TPM1P09493 MIR1276-201ENST00000408707 83 ntBASIC0.26□□□□□ -2.37
TPM1P09493 AC133104.1-201ENST00000429100 218 ntBASIC0.26□□□□□ -2.37
TPM1P09493 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.26□□□□□ -2.37
TPM1P09493 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.26□□□□□ -2.37
TPM1P09493 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.26□□□□□ -2.37
TPM1P09493 SNORA14.1-201ENST00000516113 141 ntBASIC0.26□□□□□ -2.37
TPM1P09493 MIR5000-201ENST00000577717 103 ntBASIC0.26□□□□□ -2.37
TPM1P09493 7SK.7-201ENST00000603504 247 ntBASIC0.26□□□□□ -2.37
TPM1P09493 AC122133.1-201ENST00000613964 233 ntBASIC0.26□□□□□ -2.37
TPM1P09493 MIR6788-201ENST00000618842 66 ntBASIC0.26□□□□□ -2.37
TPM1P09493 AC005592.1-201ENST00000566527 1640 ntBASIC0.26□□□□□ -2.37
TPM1P09493 MIRLET7C-201ENST00000362160 84 ntBASIC0.25□□□□□ -2.37
TPM1P09493 RNU6-137P-201ENST00000363680 108 ntBASIC0.25□□□□□ -2.37
TPM1P09493 MIR526A1-201ENST00000384897 85 ntBASIC0.25□□□□□ -2.37
TPM1P09493 AL049545.1-201ENST00000401856 572 ntBASIC0.25□□□□□ -2.37
TPM1P09493 MIR548J-201ENST00000408833 112 ntBASIC0.25□□□□□ -2.37
TPM1P09493 RNU2-9P-201ENST00000410194 145 ntBASIC0.25□□□□□ -2.37
TPM1P09493 AL603825.1-201ENST00000438481 80 ntBASIC0.25□□□□□ -2.37
TPM1P09493 AL356010.1-201ENST00000456364 102 ntBASIC0.25□□□□□ -2.37
TPM1P09493 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.25□□□□□ -2.37
TPM1P09493 AK6P2-201ENST00000549020 471 ntBASIC0.25□□□□□ -2.37
TPM1P09493 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.25□□□□□ -2.37
TPM1P09493 RNU6-181P-201ENST00000363225 107 ntBASIC0.24□□□□□ -2.37
TPM1P09493 RNU6-348P-201ENST00000384386 107 ntBASIC0.24□□□□□ -2.37
TPM1P09493 RNA5SP219-201ENST00000390940 113 ntBASIC0.24□□□□□ -2.37
TPM1P09493 RNA5SP482-201ENST00000391269 118 ntBASIC0.24□□□□□ -2.37
TPM1P09493 MRPS18CP6-201ENST00000423587 223 ntBASIC0.24□□□□□ -2.37
TPM1P09493 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC0.24□□□□□ -2.37
TPM1P09493 RNU7-180P-201ENST00000459240 63 ntBASIC0.24□□□□□ -2.37
TPM1P09493 RPL23AP75-201ENST00000491601 451 ntBASIC0.24□□□□□ -2.37
TPM1P09493 RNU6-237P-201ENST00000515985 71 ntBASIC0.24□□□□□ -2.37
TPM1P09493 RNU6-445P-201ENST00000516949 107 ntBASIC0.24□□□□□ -2.37
TPM1P09493 AC023157.2-201ENST00000540596 141 ntBASIC0.24□□□□□ -2.37
TPM1P09493 AC100810.6-201ENST00000638068 285 ntBASIC0.24□□□□□ -2.37
TPM1P09493 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.23□□□□□ -2.37
TPM1P09493 SNORD115-8-201ENST00000363856 82 ntBASIC0.23□□□□□ -2.37
TPM1P09493 Y_RNA.191-201ENST00000363972 113 ntBASIC0.23□□□□□ -2.37
TPM1P09493 SNORD115-38-201ENST00000365037 82 ntBASIC0.23□□□□□ -2.37
TPM1P09493 RNU6-784P-201ENST00000384330 106 ntBASIC0.23□□□□□ -2.37
TPM1P09493 SNORD65B-201ENST00000459126 73 ntBASIC0.23□□□□□ -2.37
TPM1P09493 MTATP6P9-201ENST00000515039 680 ntBASIC0.23□□□□□ -2.37
TPM1P09493 RNU6-496P-201ENST00000516145 99 ntBASIC0.23□□□□□ -2.37
TPM1P09493 MRPS36P3-201ENST00000519284 130 ntBASIC0.23□□□□□ -2.37
TPM1P09493 AC104576.1-201ENST00000524225 88 ntBASIC0.23□□□□□ -2.37
TPM1P09493 AC027288.2-201ENST00000553028 243 ntBASIC0.23□□□□□ -2.37
TPM1P09493 MIR151B-201ENST00000584249 96 ntBASIC0.23□□□□□ -2.37
TPM1P09493 MIR6504-201ENST00000613520 61 ntBASIC0.23□□□□□ -2.37
TPM1P09493 AL390237.1-201ENST00000404226 1415 ntBASIC0.22□□□□□ -2.37
TPM1P09493 RNU4-28P-201ENST00000364739 141 ntBASIC0.22□□□□□ -2.37
TPM1P09493 Y_RNA.336-201ENST00000365307 109 ntBASIC0.22□□□□□ -2.37
TPM1P09493 VTRNA1-3-201ENST00000365645 89 ntBASIC0.22□□□□□ -2.37
TPM1P09493 RNU6-1329P-201ENST00000365664 107 ntBASIC0.22□□□□□ -2.37
TPM1P09493 RNU6-342P-201ENST00000384521 104 ntBASIC0.22□□□□□ -2.37
TPM1P09493 MIR216A-201ENST00000385063 110 ntBASIC0.22□□□□□ -2.37
TPM1P09493 MIR1185-1-201ENST00000408598 86 ntBASIC0.22□□□□□ -2.37
TPM1P09493 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.22□□□□□ -2.37
TPM1P09493 AC010469.2-201ENST00000496412 480 ntBASIC0.22□□□□□ -2.37
TPM1P09493 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.22□□□□□ -2.37
TPM1P09493 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.22□□□□□ -2.37
TPM1P09493 AC097462.1-201ENST00000514125 324 ntBASIC0.22□□□□□ -2.37
TPM1P09493 SNORA18.6-201ENST00000516792 115 ntBASIC0.22□□□□□ -2.37
TPM1P09493 RNU6-341P-201ENST00000516973 96 ntBASIC0.22□□□□□ -2.37
TPM1P09493 AC087854.1-201ENST00000519706 414 ntBASIC0.22□□□□□ -2.37
TPM1P09493 AP001372.4-201ENST00000524889 472 ntBASIC0.22□□□□□ -2.37
TPM1P09493 AP002004.2-201ENST00000531656 154 ntBASIC0.22□□□□□ -2.37
TPM1P09493 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.22□□□□□ -2.37
TPM1P09493 HULC.1-201ENST00000612720 240 ntBASIC0.22□□□□□ -2.37
TPM1P09493 RNY1P8-201ENST00000383970 114 ntBASIC0.21□□□□□ -2.38
TPM1P09493 MIR140-201ENST00000385282 100 ntBASIC0.21□□□□□ -2.38
TPM1P09493 MTCO3P19-201ENST00000415864 321 ntBASIC0.21□□□□□ -2.38
TPM1P09493 MTND4P32-201ENST00000437189 1237 ntBASIC0.21□□□□□ -2.38
TPM1P09493 AC010620.1-201ENST00000601088 1102 ntBASIC0.21□□□□□ -2.38
TPM1P09493 RNU6-94P-201ENST00000607728 107 ntBASIC0.21□□□□□ -2.38
TPM1P09493 MIR8076-201ENST00000611401 83 ntBASIC0.21□□□□□ -2.38
TPM1P09493 uc_338.34-201ENST00000617467 174 ntBASIC0.21□□□□□ -2.38
TPM1P09493 MIR6513-201ENST00000621188 64 ntBASIC0.21□□□□□ -2.38
TPM1P09493 SNORA1B-201ENST00000362535 133 ntBASIC0.2□□□□□ -2.38
TPM1P09493 RNU6-1327P-201ENST00000365302 105 ntBASIC0.2□□□□□ -2.38
TPM1P09493 SNORD105-201ENST00000386910 85 ntBASIC0.2□□□□□ -2.38
TPM1P09493 BX295541.1-201ENST00000417774 250 ntBASIC0.2□□□□□ -2.38
TPM1P09493 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.2□□□□□ -2.38
TPM1P09493 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.2□□□□□ -2.38
TPM1P09493 AC108740.1-201ENST00000498629 225 ntBASIC0.2□□□□□ -2.38
TPM1P09493 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.2□□□□□ -2.38
TPM1P09493 CCDC34P1-201ENST00000507441 517 ntBASIC0.2□□□□□ -2.38
TPM1P09493 SNORA25.14-201ENST00000516481 132 ntBASIC0.2□□□□□ -2.38
TPM1P09493 RNU7-172P-201ENST00000517125 64 ntBASIC0.2□□□□□ -2.38
TPM1P09493 MTND4P7-201ENST00000523876 130 ntBASIC0.2□□□□□ -2.38
TPM1P09493 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.2□□□□□ -2.38
TPM1P09493 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.2□□□□□ -2.38
TPM1P09493 RPL21P9-201ENST00000556149 474 ntBASIC0.2□□□□□ -2.38
TPM1P09493 AC016597.2-201ENST00000613256 341 ntBASIC0.2□□□□□ -2.38
TPM1P09493 RNU6-833P-201ENST00000363486 107 ntBASIC0.19□□□□□ -2.38
TPM1P09493 Y_RNA.267-201ENST00000364679 109 ntBASIC0.19□□□□□ -2.38
TPM1P09493 MIR891A-201ENST00000401237 79 ntBASIC0.19□□□□□ -2.38
TPM1P09493 SNORD111-201ENST00000408139 94 ntBASIC0.19□□□□□ -2.38
TPM1P09493 RNU6-994P-201ENST00000410507 111 ntBASIC0.19□□□□□ -2.38
TPM1P09493 RNU6-177P-201ENST00000411257 104 ntBASIC0.19□□□□□ -2.38
TPM1P09493 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms