Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 RNU6-344P-201ENST00000516635 111 ntBASIC0.66□□□□□ -2.3
COL4A2P08572 RNU11-2P-201ENST00000516898 142 ntBASIC0.66□□□□□ -2.3
COL4A2P08572 AP003484.1-201ENST00000530974 250 ntBASIC0.66□□□□□ -2.3
COL4A2P08572 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
COL4A2P08572 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
COL4A2P08572 AC025423.5-201ENST00000550230 219 ntBASIC0.66□□□□□ -2.3
COL4A2P08572 RNU6-89P-201ENST00000606519 100 ntBASIC0.66□□□□□ -2.3
COL4A2P08572 AC009229.3-201ENST00000608056 282 ntBASIC0.66□□□□□ -2.3
COL4A2P08572 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.66□□□□□ -2.3
COL4A2P08572 RNU6-137P-201ENST00000363680 108 ntBASIC0.65□□□□□ -2.31
COL4A2P08572 Y_RNA.287-201ENST00000364853 94 ntBASIC0.65□□□□□ -2.31
COL4A2P08572 Y_RNA.373-201ENST00000365600 103 ntBASIC0.65□□□□□ -2.31
COL4A2P08572 SNORA69-201ENST00000383895 132 ntBASIC0.65□□□□□ -2.31
COL4A2P08572 RNU6-245P-201ENST00000384020 107 ntBASIC0.65□□□□□ -2.31
COL4A2P08572 RNU6-35P-201ENST00000384530 107 ntBASIC0.65□□□□□ -2.31
COL4A2P08572 RNU6-331P-201ENST00000384724 107 ntBASIC0.65□□□□□ -2.31
COL4A2P08572 MIR515-2-201ENST00000384883 83 ntBASIC0.65□□□□□ -2.31
COL4A2P08572 MIR515-1-201ENST00000384884 83 ntBASIC0.65□□□□□ -2.31
COL4A2P08572 EIF4E2P1-201ENST00000393781 255 ntBASIC0.65□□□□□ -2.31
COL4A2P08572 RNU6-1054P-201ENST00000411293 104 ntBASIC0.65□□□□□ -2.31
COL4A2P08572 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.65□□□□□ -2.31
COL4A2P08572 AL353193.1-201ENST00000421444 268 ntBASIC0.65□□□□□ -2.31
COL4A2P08572 AC010154.1-201ENST00000425857 269 ntBASIC0.65□□□□□ -2.31
COL4A2P08572 TIMM9P3-201ENST00000428659 274 ntBASIC0.65□□□□□ -2.31
COL4A2P08572 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.65□□□□□ -2.31
COL4A2P08572 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.65□□□□□ -2.31
COL4A2P08572 NDUFB4P10-201ENST00000452541 359 ntBASIC0.65□□□□□ -2.31
COL4A2P08572 RNU7-94P-201ENST00000459576 63 ntBASIC0.65□□□□□ -2.31
COL4A2P08572 CCDC34P1-201ENST00000507441 517 ntBASIC0.65□□□□□ -2.31
COL4A2P08572 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.65□□□□□ -2.31
COL4A2P08572 OSBPL9P5-201ENST00000542581 171 ntBASIC0.65□□□□□ -2.31
COL4A2P08572 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.65□□□□□ -2.31
COL4A2P08572 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.65□□□□□ -2.31
COL4A2P08572 CYP3A52P-201ENST00000563326 91 ntBASIC0.65□□□□□ -2.31
COL4A2P08572 AC100830.2-201ENST00000581636 240 ntBASIC0.65□□□□□ -2.31
COL4A2P08572 AC004492.1-201ENST00000607036 742 ntBASIC0.65□□□□□ -2.31
COL4A2P08572 AC139792.3-201ENST00000623525 224 ntBASIC0.65□□□□□ -2.31
COL4A2P08572 AC090582.1-201ENST00000636321 199 ntBASIC0.65□□□□□ -2.31
COL4A2P08572 RNU6-254P-201ENST00000363377 107 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 Y_RNA.151-201ENST00000363566 112 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 SNORD115-8-201ENST00000363856 82 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 SNORD115-38-201ENST00000365037 82 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 RNU6-968P-201ENST00000384076 107 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 MIR521-1-201ENST00000384902 87 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 MIR1197-201ENST00000408818 88 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 RNU4-55P-201ENST00000410731 137 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 RNU6-325P-201ENST00000411132 105 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 AC092447.3-201ENST00000426027 686 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 HMGN2P34-201ENST00000437647 269 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 MTCO1P19-201ENST00000443487 500 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 PCMTD1P1-201ENST00000455560 355 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 RNU6-221P-201ENST00000459541 99 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 SNORA19.2-201ENST00000516013 114 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 AL512310.8-201ENST00000550183 120 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.64□□□□□ -2.31
COL4A2P08572 AC096720.1-201ENST00000604441 183 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 RN7SKP299-201ENST00000606679 301 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 AC092807.2-201ENST00000609367 243 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 AL133215.3-201ENST00000609801 448 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 AC009509.4-201ENST00000619202 509 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 RNU6-1085P-201ENST00000363576 107 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 RNU1-124P-201ENST00000363861 145 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 Y_RNA.274-201ENST00000364714 101 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 RNU6-534P-201ENST00000364877 106 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 SNORA22-201ENST00000383907 134 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 Y_RNA.409-201ENST00000383990 98 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 RNU6-790P-201ENST00000384479 105 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 SNORA22C-201ENST00000384614 134 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 Y_RNA.553-201ENST00000384670 102 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 MIR32-201ENST00000384965 70 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 MIR548B-201ENST00000385247 97 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 RNU6-440P-201ENST00000390882 105 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 Y_RNA.582-201ENST00000391023 95 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 MRPL35P1-201ENST00000404272 572 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 MIR1185-2-201ENST00000408687 86 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 RNU6-57P-201ENST00000411348 103 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 RPL37P10-201ENST00000412884 288 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.64□□□□□ -2.31
COL4A2P08572 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.64□□□□□ -2.31
COL4A2P08572 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.64□□□□□ -2.31
COL4A2P08572 RNU6-1208P-201ENST00000459588 107 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.64□□□□□ -2.31
COL4A2P08572 AC091133.4-201ENST00000511142 308 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 RN7SKP88-201ENST00000516847 250 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 MIR3664-201ENST00000579074 99 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 AL162424.1-201ENST00000602325 221 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 7SK.8-201ENST00000612110 250 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 7SK.11-201ENST00000615477 250 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.64□□□□□ -2.31
COL4A2P08572 7SK.13-201ENST00000622040 250 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 AL078596.1-201ENST00000624856 447 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 snoZ196.1-201ENST00000625269 89 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 MIR3974-201ENST00000637126 96 ntBASIC0.64□□□□□ -2.31
COL4A2P08572 RNU6-280P-201ENST00000364145 104 ntBASIC0.63□□□□□ -2.31
COL4A2P08572 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.63□□□□□ -2.31
COL4A2P08572 RNU6-259P-201ENST00000383999 107 ntBASIC0.63□□□□□ -2.31
COL4A2P08572 RNU6-1065P-201ENST00000384513 106 ntBASIC0.63□□□□□ -2.31
COL4A2P08572 Y_RNA.518-201ENST00000384552 113 ntBASIC0.63□□□□□ -2.31
COL4A2P08572 MIR146A-201ENST00000385201 99 ntBASIC0.63□□□□□ -2.31
COL4A2P08572 RNU6-1186P-201ENST00000410429 97 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms