Protein–RNA interactions for Protein: P08247

SYP, Synaptophysin, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPP08247 AC010332.2-201ENST00000613083 1904 ntBASIC3.19□□□□□ -1.9
SYPP08247 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
SYPP08247 RNU6-1290P-201ENST00000362957 109 ntBASIC3.19□□□□□ -1.9
SYPP08247 Y_RNA.229-201ENST00000364347 113 ntBASIC3.19□□□□□ -1.9
SYPP08247 RNU6-1083P-201ENST00000384022 107 ntBASIC3.19□□□□□ -1.9
SYPP08247 MIR1294-201ENST00000408503 142 ntBASIC3.19□□□□□ -1.9
SYPP08247 AC126124.2-201ENST00000413542 321 ntBASIC3.19□□□□□ -1.9
SYPP08247 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.19□□□□□ -1.9
SYPP08247 AL121890.1-201ENST00000435457 205 ntBASIC3.19□□□□□ -1.9
SYPP08247 HSPE1P13-201ENST00000451143 297 ntBASIC3.19□□□□□ -1.9
SYPP08247 AC006539.3-201ENST00000454258 129 ntBASIC3.19□□□□□ -1.9
SYPP08247 RNU7-14P-201ENST00000459331 62 ntBASIC3.19□□□□□ -1.9
SYPP08247 RNU7-57P-201ENST00000459540 60 ntBASIC3.19□□□□□ -1.9
SYPP08247 SCARNA17.1-201ENST00000516211 143 ntBASIC3.19□□□□□ -1.9
SYPP08247 SCARNA17.2-201ENST00000516334 143 ntBASIC3.19□□□□□ -1.9
SYPP08247 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.19□□□□□ -1.9
SYPP08247 MIR4724-201ENST00000579485 89 ntBASIC3.19□□□□□ -1.9
SYPP08247 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SYPP08247 SCARNA17.4-201ENST00000614296 143 ntBASIC3.19□□□□□ -1.9
SYPP08247 AL365222.1-201ENST00000614661 98 ntBASIC3.19□□□□□ -1.9
SYPP08247 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.19□□□□□ -1.9
SYPP08247 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.19□□□□□ -1.9
SYPP08247 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.19□□□□□ -1.9
SYPP08247 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.19□□□□□ -1.9
SYPP08247 AL159152.1-201ENST00000635019 2587 ntBASIC3.18□□□□□ -1.9
SYPP08247 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.18□□□□□ -1.9
SYPP08247 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SYPP08247 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SYPP08247 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SYPP08247 RNU6-486P-201ENST00000363116 107 ntBASIC3.18□□□□□ -1.9
SYPP08247 RNU6-944P-201ENST00000364023 107 ntBASIC3.18□□□□□ -1.9
SYPP08247 SNORA20B-201ENST00000384220 132 ntBASIC3.18□□□□□ -1.9
SYPP08247 RNU6-1274P-201ENST00000384557 107 ntBASIC3.18□□□□□ -1.9
SYPP08247 MT-TT-201ENST00000387460 66 ntBASIC3.18□□□□□ -1.9
SYPP08247 RNU6-735P-201ENST00000410612 107 ntBASIC3.18□□□□□ -1.9
SYPP08247 AL353705.1-201ENST00000433468 480 ntBASIC3.18□□□□□ -1.9
SYPP08247 HSPE1P21-201ENST00000438283 308 ntBASIC3.18□□□□□ -1.9
SYPP08247 AC010401.1-201ENST00000463867 348 ntBASIC3.18□□□□□ -1.9
SYPP08247 RN7SL442P-201ENST00000473804 320 ntBASIC3.18□□□□□ -1.9
SYPP08247 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.18□□□□□ -1.9
SYPP08247 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.18□□□□□ -1.9
SYPP08247 RNU7-115P-201ENST00000516433 55 ntBASIC3.18□□□□□ -1.9
SYPP08247 RNU6-1337P-201ENST00000516525 95 ntBASIC3.18□□□□□ -1.9
SYPP08247 RNU6-711P-201ENST00000517255 106 ntBASIC3.18□□□□□ -1.9
SYPP08247 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.18□□□□□ -1.9
SYPP08247 MIR3124-201ENST00000582636 67 ntBASIC3.18□□□□□ -1.9
SYPP08247 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.18□□□□□ -1.9
SYPP08247 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.18□□□□□ -1.9
SYPP08247 MIR548AY-201ENST00000617669 107 ntBASIC3.18□□□□□ -1.9
SYPP08247 AC012640.5-201ENST00000623897 319 ntBASIC3.18□□□□□ -1.9
SYPP08247 MIR7153-201ENST00000637758 57 ntBASIC3.18□□□□□ -1.9
SYPP08247 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
SYPP08247 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SYPP08247 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.17□□□□□ -1.9
SYPP08247 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.17□□□□□ -1.9
SYPP08247 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
SYPP08247 MAPK10-322ENST00000641485 4530 ntBASIC3.17□□□□□ -1.9
SYPP08247 MIR367-201ENST00000362299 68 ntBASIC3.17□□□□□ -1.9
SYPP08247 SNORA27.1-201ENST00000362604 124 ntBASIC3.17□□□□□ -1.9
SYPP08247 RNU1-72P-201ENST00000362976 153 ntBASIC3.17□□□□□ -1.9
SYPP08247 SNORA71.1-201ENST00000364523 117 ntBASIC3.17□□□□□ -1.9
SYPP08247 Y_RNA.337-201ENST00000365312 102 ntBASIC3.17□□□□□ -1.9
SYPP08247 RPL30P13-201ENST00000418873 348 ntBASIC3.17□□□□□ -1.9
SYPP08247 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.17□□□□□ -1.9
SYPP08247 AC022018.1-201ENST00000430685 241 ntBASIC3.17□□□□□ -1.9
SYPP08247 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.17□□□□□ -1.9
SYPP08247 AC074290.1-201ENST00000448883 135 ntBASIC3.17□□□□□ -1.9
SYPP08247 AL121914.1-201ENST00000450188 156 ntBASIC3.17□□□□□ -1.9
SYPP08247 AL137159.1-201ENST00000452808 512 ntBASIC3.17□□□□□ -1.9
SYPP08247 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.17□□□□□ -1.9
SYPP08247 RN7SL429P-201ENST00000479090 223 ntBASIC3.17□□□□□ -1.9
SYPP08247 RN7SL489P-201ENST00000486185 223 ntBASIC3.17□□□□□ -1.9
SYPP08247 RN7SL327P-201ENST00000488659 223 ntBASIC3.17□□□□□ -1.9
SYPP08247 AC083906.5-201ENST00000503722 328 ntBASIC3.17□□□□□ -1.9
SYPP08247 SNORA25.12-201ENST00000516202 82 ntBASIC3.17□□□□□ -1.9
SYPP08247 AC107934.2-201ENST00000518653 310 ntBASIC3.17□□□□□ -1.9
SYPP08247 MIR4753-201ENST00000585119 83 ntBASIC3.17□□□□□ -1.9
SYPP08247 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.17□□□□□ -1.9
SYPP08247 uc_338.1-201ENST00000612113 180 ntBASIC3.17□□□□□ -1.9
SYPP08247 RN7SL853P-201ENST00000617250 223 ntBASIC3.17□□□□□ -1.9
SYPP08247 AC022149.2-201ENST00000621061 203 ntBASIC3.17□□□□□ -1.9
SYPP08247 snoZ196.1-201ENST00000625269 89 ntBASIC3.17□□□□□ -1.9
SYPP08247 AC110079.1-202ENST00000635213 138 ntBASIC3.17□□□□□ -1.9
SYPP08247 AC068647.2-201ENST00000637380 353 ntBASIC3.17□□□□□ -1.9
SYPP08247 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SYPP08247 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SYPP08247 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SYPP08247 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SYPP08247 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.17□□□□□ -1.9
SYPP08247 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
SYPP08247 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SYPP08247 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SYPP08247 RNU6-234P-201ENST00000365229 104 ntBASIC3.16□□□□□ -1.9
SYPP08247 SNORA7.4-201ENST00000384249 137 ntBASIC3.16□□□□□ -1.9
SYPP08247 RNU6-301P-201ENST00000384277 107 ntBASIC3.16□□□□□ -1.9
SYPP08247 SNORD116-13-201ENST00000384408 92 ntBASIC3.16□□□□□ -1.9
SYPP08247 SNORA40-201ENST00000388090 126 ntBASIC3.16□□□□□ -1.9
SYPP08247 RNU6-1228P-201ENST00000391014 107 ntBASIC3.16□□□□□ -1.9
SYPP08247 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.16□□□□□ -1.9
SYPP08247 RNU6-221P-201ENST00000459541 99 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms