Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC243994.1-201ENST00000618627 109 ntBASIC0.32□□□□□ -2.36
HLA-DQB2P05538 MIR6515-201ENST00000619843 57 ntBASIC0.32□□□□□ -2.36
HLA-DQB2P05538 7SK.10-201ENST00000621414 298 ntBASIC0.32□□□□□ -2.36
HLA-DQB2P05538 AC244015.1-201ENST00000622301 99 ntBASIC0.32□□□□□ -2.36
HLA-DQB2P05538 Y_RNA.265-201ENST00000364677 108 ntBASIC0.31□□□□□ -2.36
HLA-DQB2P05538 SNORD87-201ENST00000364849 89 ntBASIC0.31□□□□□ -2.36
HLA-DQB2P05538 VTRNA1-3-201ENST00000365645 89 ntBASIC0.31□□□□□ -2.36
HLA-DQB2P05538 RNU6-517P-201ENST00000384362 110 ntBASIC0.31□□□□□ -2.36
HLA-DQB2P05538 RNU6-163P-201ENST00000384396 106 ntBASIC0.31□□□□□ -2.36
HLA-DQB2P05538 Y_RNA.560-201ENST00000384689 102 ntBASIC0.31□□□□□ -2.36
HLA-DQB2P05538 RNU6-248P-201ENST00000410720 107 ntBASIC0.31□□□□□ -2.36
HLA-DQB2P05538 SNORD42A-201ENST00000459584 64 ntBASIC0.31□□□□□ -2.36
HLA-DQB2P05538 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.31□□□□□ -2.36
HLA-DQB2P05538 SNORD111.1-201ENST00000516421 86 ntBASIC0.31□□□□□ -2.36
HLA-DQB2P05538 SNORA18.6-201ENST00000516792 115 ntBASIC0.31□□□□□ -2.36
HLA-DQB2P05538 AC025627.3-201ENST00000582078 182 ntBASIC0.31□□□□□ -2.36
HLA-DQB2P05538 AL117336.2-201ENST00000602435 335 ntBASIC0.31□□□□□ -2.36
HLA-DQB2P05538 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.31□□□□□ -2.36
HLA-DQB2P05538 HULC.1-201ENST00000612720 240 ntBASIC0.31□□□□□ -2.36
HLA-DQB2P05538 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.31□□□□□ -2.36
HLA-DQB2P05538 AC134026.1-201ENST00000623249 2239 ntBASIC0.3□□□□□ -2.36
HLA-DQB2P05538 Y_RNA.100-201ENST00000363141 102 ntBASIC0.3□□□□□ -2.36
HLA-DQB2P05538 RNU6-245P-201ENST00000384020 107 ntBASIC0.3□□□□□ -2.36
HLA-DQB2P05538 RNA5SP219-201ENST00000390940 113 ntBASIC0.3□□□□□ -2.36
HLA-DQB2P05538 AL049545.1-201ENST00000401856 572 ntBASIC0.3□□□□□ -2.36
HLA-DQB2P05538 CYCSP46-201ENST00000423569 204 ntBASIC0.3□□□□□ -2.36
HLA-DQB2P05538 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.3□□□□□ -2.36
HLA-DQB2P05538 MTND4P32-201ENST00000437189 1237 ntBASIC0.3□□□□□ -2.36
HLA-DQB2P05538 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.3□□□□□ -2.36
HLA-DQB2P05538 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.3□□□□□ -2.36
HLA-DQB2P05538 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.3□□□□□ -2.36
HLA-DQB2P05538 RNU7-12P-201ENST00000516030 62 ntBASIC0.3□□□□□ -2.36
HLA-DQB2P05538 MTND4LP26-201ENST00000518144 282 ntBASIC0.3□□□□□ -2.36
HLA-DQB2P05538 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
HLA-DQB2P05538 AC090616.2-202ENST00000584248 222 ntBASIC0.3□□□□□ -2.36
HLA-DQB2P05538 AC131055.1-201ENST00000584626 316 ntBASIC0.3□□□□□ -2.36
HLA-DQB2P05538 MIR3192-201ENST00000584920 77 ntBASIC0.3□□□□□ -2.36
HLA-DQB2P05538 AC004223.2-201ENST00000590309 544 ntBASIC0.3□□□□□ -2.36
HLA-DQB2P05538 FER-210ENST00000628534 558 ntTSL 5 BASIC0.3□□□□□ -2.36
HLA-DQB2P05538 MIRLET7C-201ENST00000362160 84 ntBASIC0.29□□□□□ -2.36
HLA-DQB2P05538 RNU6-1266P-201ENST00000362794 105 ntBASIC0.29□□□□□ -2.36
HLA-DQB2P05538 RNU6-137P-201ENST00000363680 108 ntBASIC0.29□□□□□ -2.36
HLA-DQB2P05538 SNORD115-8-201ENST00000363856 82 ntBASIC0.29□□□□□ -2.36
HLA-DQB2P05538 SNORD115-38-201ENST00000365037 82 ntBASIC0.29□□□□□ -2.36
HLA-DQB2P05538 RNU6-1329P-201ENST00000365664 107 ntBASIC0.29□□□□□ -2.36
HLA-DQB2P05538 SNORA50A-201ENST00000384225 134 ntBASIC0.29□□□□□ -2.36
HLA-DQB2P05538 RNU6-784P-201ENST00000384330 106 ntBASIC0.29□□□□□ -2.36
HLA-DQB2P05538 RNU6-1237P-201ENST00000384777 107 ntBASIC0.29□□□□□ -2.36
HLA-DQB2P05538 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.29□□□□□ -2.36
HLA-DQB2P05538 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.29□□□□□ -2.36
HLA-DQB2P05538 NDUFA5P4-201ENST00000436704 385 ntBASIC0.29□□□□□ -2.36
HLA-DQB2P05538 MRPS10P1-201ENST00000448483 130 ntBASIC0.29□□□□□ -2.36
HLA-DQB2P05538 RPL23AP75-201ENST00000491601 451 ntBASIC0.29□□□□□ -2.36
HLA-DQB2P05538 AC091133.4-201ENST00000511142 308 ntBASIC0.29□□□□□ -2.36
HLA-DQB2P05538 RNU6-1129P-201ENST00000515964 104 ntBASIC0.29□□□□□ -2.36
HLA-DQB2P05538 MTND1P35-201ENST00000526739 508 ntBASIC0.29□□□□□ -2.36
HLA-DQB2P05538 AP003716.2-201ENST00000528260 108 ntBASIC0.29□□□□□ -2.36
HLA-DQB2P05538 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.29□□□□□ -2.36
HLA-DQB2P05538 MIR4438-201ENST00000585271 93 ntBASIC0.29□□□□□ -2.36
HLA-DQB2P05538 Z83818.1-201ENST00000603584 150 ntBASIC0.29□□□□□ -2.36
HLA-DQB2P05538 AC008536.2-201ENST00000607284 349 ntBASIC0.29□□□□□ -2.36
HLA-DQB2P05538 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.29□□□□□ -2.36
HLA-DQB2P05538 MIR6079-201ENST00000635807 62 ntBASIC0.29□□□□□ -2.36
HLA-DQB2P05538 AL589743.1-201ENST00000551932 2712 ntBASIC0.28□□□□□ -2.36
HLA-DQB2P05538 RNA5SP264-201ENST00000363115 107 ntBASIC0.28□□□□□ -2.36
HLA-DQB2P05538 Y_RNA.355-201ENST00000365462 98 ntBASIC0.28□□□□□ -2.36
HLA-DQB2P05538 RNU6-584P-201ENST00000410350 95 ntBASIC0.28□□□□□ -2.36
HLA-DQB2P05538 AL663109.1-201ENST00000411498 844 ntBASIC0.28□□□□□ -2.36
HLA-DQB2P05538 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.28□□□□□ -2.36
HLA-DQB2P05538 MTCYBP8-201ENST00000422855 651 ntBASIC0.28□□□□□ -2.36
HLA-DQB2P05538 AC244098.3-201ENST00000424803 96 ntBASIC0.28□□□□□ -2.36
HLA-DQB2P05538 RPL23AP50-201ENST00000434149 455 ntBASIC0.28□□□□□ -2.36
HLA-DQB2P05538 AL162725.1-201ENST00000435405 301 ntBASIC0.28□□□□□ -2.36
HLA-DQB2P05538 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.28□□□□□ -2.36
HLA-DQB2P05538 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.28□□□□□ -2.36
HLA-DQB2P05538 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.28□□□□□ -2.36
HLA-DQB2P05538 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.28□□□□□ -2.36
HLA-DQB2P05538 RN7SKP12-201ENST00000516275 143 ntBASIC0.28□□□□□ -2.36
HLA-DQB2P05538 RNU7-28P-201ENST00000516759 62 ntBASIC0.28□□□□□ -2.36
HLA-DQB2P05538 RNA5SP54-201ENST00000516951 92 ntBASIC0.28□□□□□ -2.36
HLA-DQB2P05538 RNU6-58P-201ENST00000517143 103 ntBASIC0.28□□□□□ -2.36
HLA-DQB2P05538 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.28□□□□□ -2.36
HLA-DQB2P05538 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.28□□□□□ -2.36
HLA-DQB2P05538 AC109810.1-201ENST00000534066 224 ntBASIC0.28□□□□□ -2.36
HLA-DQB2P05538 AC023157.2-201ENST00000540596 141 ntBASIC0.28□□□□□ -2.36
HLA-DQB2P05538 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.28□□□□□ -2.36
HLA-DQB2P05538 MIR4424-201ENST00000585257 86 ntBASIC0.28□□□□□ -2.36
HLA-DQB2P05538 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
HLA-DQB2P05538 uc_338.34-201ENST00000617467 174 ntBASIC0.28□□□□□ -2.36
HLA-DQB2P05538 AC005592.1-201ENST00000566527 1640 ntBASIC0.27□□□□□ -2.37
HLA-DQB2P05538 RNU6-1120P-201ENST00000362988 108 ntBASIC0.27□□□□□ -2.37
HLA-DQB2P05538 SNORA36.2-201ENST00000384004 127 ntBASIC0.27□□□□□ -2.37
HLA-DQB2P05538 MIR526A1-201ENST00000384897 85 ntBASIC0.27□□□□□ -2.37
HLA-DQB2P05538 RNA5SP222-201ENST00000411039 105 ntBASIC0.27□□□□□ -2.37
HLA-DQB2P05538 MTCYBP10-201ENST00000424905 650 ntBASIC0.27□□□□□ -2.37
HLA-DQB2P05538 MTCO2P12-201ENST00000427426 682 ntBASIC0.27□□□□□ -2.37
HLA-DQB2P05538 DAP3P1-201ENST00000441522 278 ntBASIC0.27□□□□□ -2.37
HLA-DQB2P05538 AC073415.1-201ENST00000449240 153 ntBASIC0.27□□□□□ -2.37
HLA-DQB2P05538 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.27□□□□□ -2.37
HLA-DQB2P05538 RNU6-1110P-201ENST00000516462 101 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms