Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 RNU6-718P-201ENST00000516166 105 ntBASIC1.02□□□□□ -2.25
CD74P04233 Y_RNA.673-201ENST00000516306 88 ntBASIC1.02□□□□□ -2.25
CD74P04233 RNU6-344P-201ENST00000516635 111 ntBASIC1.02□□□□□ -2.25
CD74P04233 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.02□□□□□ -2.25
CD74P04233 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.02□□□□□ -2.25
CD74P04233 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.02□□□□□ -2.25
CD74P04233 EIF1P4-201ENST00000572664 335 ntBASIC1.02□□□□□ -2.25
CD74P04233 SNORD11B-201ENST00000607707 90 ntBASIC1.02□□□□□ -2.25
CD74P04233 AL353149.1-201ENST00000610667 244 ntBASIC1.02□□□□□ -2.25
CD74P04233 AC093913.1-201ENST00000614178 329 ntBASIC1.02□□□□□ -2.25
CD74P04233 snoZ196.1-201ENST00000625269 89 ntBASIC1.02□□□□□ -2.25
CD74P04233 MIR302D-201ENST00000362275 68 ntBASIC1.01□□□□□ -2.25
CD74P04233 Y_RNA.48-201ENST00000362710 103 ntBASIC1.01□□□□□ -2.25
CD74P04233 SNORA7.1-201ENST00000363750 139 ntBASIC1.01□□□□□ -2.25
CD74P04233 Y_RNA.287-201ENST00000364853 94 ntBASIC1.01□□□□□ -2.25
CD74P04233 Y_RNA.327-201ENST00000365201 102 ntBASIC1.01□□□□□ -2.25
CD74P04233 Y_RNA.415-201ENST00000384012 112 ntBASIC1.01□□□□□ -2.25
CD74P04233 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.01□□□□□ -2.25
CD74P04233 MIR548F1-201ENST00000408667 84 ntBASIC1.01□□□□□ -2.25
CD74P04233 AC016909.1-201ENST00000415916 166 ntBASIC1.01□□□□□ -2.25
CD74P04233 COX6CP10-201ENST00000416832 224 ntBASIC1.01□□□□□ -2.25
CD74P04233 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.01□□□□□ -2.25
CD74P04233 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.01□□□□□ -2.25
CD74P04233 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.01□□□□□ -2.25
CD74P04233 MTND4LP16-201ENST00000440828 295 ntBASIC1.01□□□□□ -2.25
CD74P04233 RPS29P28-201ENST00000446439 141 ntBASIC1.01□□□□□ -2.25
CD74P04233 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.01□□□□□ -2.25
CD74P04233 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.01□□□□□ -2.25
CD74P04233 snoU13.27-201ENST00000459278 104 ntBASIC1.01□□□□□ -2.25
CD74P04233 RNU7-34P-201ENST00000459394 64 ntBASIC1.01□□□□□ -2.25
CD74P04233 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.01□□□□□ -2.25
CD74P04233 RNU6-864P-201ENST00000516256 108 ntBASIC1.01□□□□□ -2.25
CD74P04233 RNU6-1146P-201ENST00000516282 102 ntBASIC1.01□□□□□ -2.25
CD74P04233 RNA5SP481-201ENST00000516814 122 ntBASIC1.01□□□□□ -2.25
CD74P04233 RNU1-92P-201ENST00000517017 135 ntBASIC1.01□□□□□ -2.25
CD74P04233 RNA5SP454-201ENST00000517231 127 ntBASIC1.01□□□□□ -2.25
CD74P04233 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.01□□□□□ -2.25
CD74P04233 AC027288.2-201ENST00000553028 243 ntBASIC1.01□□□□□ -2.25
CD74P04233 AP003465.2-201ENST00000602571 373 ntBASIC1.01□□□□□ -2.25
CD74P04233 7SK.7-201ENST00000603504 247 ntBASIC1.01□□□□□ -2.25
CD74P04233 MIR6128-201ENST00000615528 109 ntBASIC1.01□□□□□ -2.25
CD74P04233 MIR8070-201ENST00000616510 88 ntBASIC1.01□□□□□ -2.25
CD74P04233 AC009248.2-201ENST00000619826 254 ntBASIC1.01□□□□□ -2.25
CD74P04233 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
CD74P04233 MTND4P12-201ENST00000498999 1377 ntBASIC1□□□□□ -2.25
CD74P04233 SNORD115-32-201ENST00000364079 82 ntBASIC1□□□□□ -2.25
CD74P04233 SNORD116-4-201ENST00000384733 96 ntBASIC1□□□□□ -2.25
CD74P04233 RNA5SP109-201ENST00000391010 116 ntBASIC1□□□□□ -2.25
CD74P04233 AC069257.2-201ENST00000441819 155 ntBASIC1□□□□□ -2.25
CD74P04233 AC025647.1-201ENST00000517879 253 ntBASIC1□□□□□ -2.25
CD74P04233 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1□□□□□ -2.25
CD74P04233 AL078604.3-201ENST00000615580 211 ntBASIC1□□□□□ -2.25
CD74P04233 AC008873.1-201ENST00000625051 138 ntBASIC1□□□□□ -2.25
CD74P04233 MIR3688-2-201ENST00000636963 87 ntBASIC1□□□□□ -2.25
CD74P04233 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
CD74P04233 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
CD74P04233 SNORD115-8-201ENST00000363856 82 ntBASIC0.99□□□□□ -2.25
CD74P04233 SNORD115-38-201ENST00000365037 82 ntBASIC0.99□□□□□ -2.25
CD74P04233 RNU6-245P-201ENST00000384020 107 ntBASIC0.99□□□□□ -2.25
CD74P04233 Y_RNA.473-201ENST00000384333 102 ntBASIC0.99□□□□□ -2.25
CD74P04233 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
CD74P04233 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
CD74P04233 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.99□□□□□ -2.25
CD74P04233 EIF1P1-201ENST00000421436 341 ntBASIC0.99□□□□□ -2.25
CD74P04233 USP9YP30-201ENST00000430729 455 ntBASIC0.99□□□□□ -2.25
CD74P04233 AC005002.2-201ENST00000438228 269 ntBASIC0.99□□□□□ -2.25
CD74P04233 AP000870.1-201ENST00000472927 406 ntBASIC0.99□□□□□ -2.25
CD74P04233 AC091179.3-201ENST00000474761 144 ntBASIC0.99□□□□□ -2.25
CD74P04233 AL163195.1-201ENST00000496941 348 ntBASIC0.99□□□□□ -2.25
CD74P04233 HMGN1P12-201ENST00000499125 195 ntBASIC0.99□□□□□ -2.25
CD74P04233 RNU4-49P-201ENST00000516080 140 ntBASIC0.99□□□□□ -2.25
CD74P04233 RNU6-566P-201ENST00000516790 107 ntBASIC0.99□□□□□ -2.25
CD74P04233 RNU6-1198P-201ENST00000516904 67 ntBASIC0.99□□□□□ -2.25
CD74P04233 RNU1-54P-201ENST00000517181 120 ntBASIC0.99□□□□□ -2.25
CD74P04233 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.99□□□□□ -2.25
CD74P04233 MIR4709-201ENST00000577272 72 ntBASIC0.99□□□□□ -2.25
CD74P04233 MIR4790-201ENST00000577799 79 ntBASIC0.99□□□□□ -2.25
CD74P04233 MIR5695-201ENST00000579717 85 ntBASIC0.99□□□□□ -2.25
CD74P04233 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.99□□□□□ -2.25
CD74P04233 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
CD74P04233 Y_RNA.157-201ENST00000363638 102 ntBASIC0.98□□□□□ -2.25
CD74P04233 SNORA72.2-201ENST00000365028 127 ntBASIC0.98□□□□□ -2.25
CD74P04233 RNU6-1240P-201ENST00000365155 104 ntBASIC0.98□□□□□ -2.25
CD74P04233 Y_RNA.405-201ENST00000383979 100 ntBASIC0.98□□□□□ -2.25
CD74P04233 RNU6-1013P-201ENST00000384180 107 ntBASIC0.98□□□□□ -2.25
CD74P04233 Y_RNA.451-201ENST00000384200 100 ntBASIC0.98□□□□□ -2.25
CD74P04233 RNU6-17P-201ENST00000384245 107 ntBASIC0.98□□□□□ -2.25
CD74P04233 RNU6-18P-201ENST00000384527 107 ntBASIC0.98□□□□□ -2.25
CD74P04233 Y_RNA.524-201ENST00000384564 100 ntBASIC0.98□□□□□ -2.25
CD74P04233 Y_RNA.561-201ENST00000384694 100 ntBASIC0.98□□□□□ -2.25
CD74P04233 MRPL35P1-201ENST00000404272 572 ntBASIC0.98□□□□□ -2.25
CD74P04233 MIR1287-201ENST00000408492 90 ntBASIC0.98□□□□□ -2.25
CD74P04233 RNU6-1186P-201ENST00000410429 97 ntBASIC0.98□□□□□ -2.25
CD74P04233 AC243428.1-201ENST00000421099 264 ntBASIC0.98□□□□□ -2.25
CD74P04233 MRPL35P3-201ENST00000421557 364 ntBASIC0.98□□□□□ -2.25
CD74P04233 RPS27P16-201ENST00000425758 201 ntBASIC0.98□□□□□ -2.25
CD74P04233 AC010154.1-201ENST00000425857 269 ntBASIC0.98□□□□□ -2.25
CD74P04233 RNU6-221P-201ENST00000459541 99 ntBASIC0.98□□□□□ -2.25
CD74P04233 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.98□□□□□ -2.25
CD74P04233 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms