Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 MIR4529-201ENST00000578110 78 ntBASIC1.95□□□□□ -2.1
RAF1P04049 MIR5006-201ENST00000583027 110 ntBASIC1.95□□□□□ -2.1
RAF1P04049 AC010999.1-201ENST00000611856 324 ntBASIC1.95□□□□□ -2.1
RAF1P04049 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.95□□□□□ -2.1
RAF1P04049 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.95□□□□□ -2.1
RAF1P04049 MIR219B-201ENST00000637023 88 ntBASIC1.95□□□□□ -2.1
RAF1P04049 AL359851.1-201ENST00000569460 4997 ntBASIC1.95□□□□□ -2.1
RAF1P04049 Y_RNA.27-201ENST00000362540 103 ntBASIC1.94□□□□□ -2.1
RAF1P04049 Y_RNA.162-201ENST00000363683 102 ntBASIC1.94□□□□□ -2.1
RAF1P04049 Y_RNA.179-201ENST00000363844 90 ntBASIC1.94□□□□□ -2.1
RAF1P04049 Y_RNA.238-201ENST00000364441 102 ntBASIC1.94□□□□□ -2.1
RAF1P04049 SNORA16B-201ENST00000364674 135 ntBASIC1.94□□□□□ -2.1
RAF1P04049 Y_RNA.389-201ENST00000383924 113 ntBASIC1.94□□□□□ -2.1
RAF1P04049 Y_RNA.424-201ENST00000384063 103 ntBASIC1.94□□□□□ -2.1
RAF1P04049 RNU6-1145P-201ENST00000384246 107 ntBASIC1.94□□□□□ -2.1
RAF1P04049 MIR320B2-201ENST00000408479 138 ntBASIC1.94□□□□□ -2.1
RAF1P04049 SNORA11.4-201ENST00000408823 129 ntBASIC1.94□□□□□ -2.1
RAF1P04049 RNA5SP247-201ENST00000411181 105 ntBASIC1.94□□□□□ -2.1
RAF1P04049 AC009237.7-201ENST00000447357 229 ntBASIC1.94□□□□□ -2.1
RAF1P04049 RPS23P5-201ENST00000495419 428 ntBASIC1.94□□□□□ -2.1
RAF1P04049 AC093852.1-201ENST00000503587 266 ntBASIC1.94□□□□□ -2.1
RAF1P04049 ATP5EP1-201ENST00000510257 156 ntBASIC1.94□□□□□ -2.1
RAF1P04049 RNA5SP200-201ENST00000516360 103 ntBASIC1.94□□□□□ -2.1
RAF1P04049 RN7SKP49-201ENST00000516675 260 ntBASIC1.94□□□□□ -2.1
RAF1P04049 RNU1-40P-201ENST00000516816 164 ntBASIC1.94□□□□□ -2.1
RAF1P04049 RNU1-97P-201ENST00000516872 164 ntBASIC1.94□□□□□ -2.1
RAF1P04049 RNA5SP364-201ENST00000516938 78 ntBASIC1.94□□□□□ -2.1
RAF1P04049 RNA5SP490-201ENST00000517141 136 ntBASIC1.94□□□□□ -2.1
RAF1P04049 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.94□□□□□ -2.1
RAF1P04049 AC007229.1-201ENST00000590455 412 ntBASIC1.94□□□□□ -2.1
RAF1P04049 AC124312.5-201ENST00000604451 268 ntBASIC1.94□□□□□ -2.1
RAF1P04049 AL360085.1-201ENST00000604713 532 ntBASIC1.94□□□□□ -2.1
RAF1P04049 RPL17P51-201ENST00000605218 238 ntBASIC1.94□□□□□ -2.1
RAF1P04049 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.94□□□□□ -2.1
RAF1P04049 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.94□□□□□ -2.1
RAF1P04049 MIR6132-201ENST00000622083 109 ntBASIC1.94□□□□□ -2.1
RAF1P04049 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
RAF1P04049 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
RAF1P04049 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.93□□□□□ -2.1
RAF1P04049 RNU1-62P-201ENST00000362599 164 ntBASIC1.93□□□□□ -2.1
RAF1P04049 RNU6-727P-201ENST00000363592 107 ntBASIC1.93□□□□□ -2.1
RAF1P04049 RNU6-793P-201ENST00000384233 104 ntBASIC1.93□□□□□ -2.1
RAF1P04049 SNORD14D-201ENST00000384390 87 ntBASIC1.93□□□□□ -2.1
RAF1P04049 SNORA64-201ENST00000384674 134 ntBASIC1.93□□□□□ -2.1
RAF1P04049 MIR518A2-201ENST00000384966 87 ntBASIC1.93□□□□□ -2.1
RAF1P04049 MIR17-201ENST00000385012 84 ntBASIC1.93□□□□□ -2.1
RAF1P04049 AL357139.1-201ENST00000407792 426 ntBASIC1.93□□□□□ -2.1
RAF1P04049 RNU6-985P-201ENST00000410182 104 ntBASIC1.93□□□□□ -2.1
RAF1P04049 RNU2-40P-201ENST00000410833 196 ntBASIC1.93□□□□□ -2.1
RAF1P04049 SRIP3-201ENST00000413200 219 ntBASIC1.93□□□□□ -2.1
RAF1P04049 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.93□□□□□ -2.1
RAF1P04049 AC245102.2-201ENST00000448956 180 ntBASIC1.93□□□□□ -2.1
RAF1P04049 RPL23AP7-203ENST00000449021 469 ntBASIC1.93□□□□□ -2.1
RAF1P04049 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.93□□□□□ -2.1
RAF1P04049 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.93□□□□□ -2.1
RAF1P04049 AC025033.1-201ENST00000463883 194 ntBASIC1.93□□□□□ -2.1
RAF1P04049 AC055731.1-201ENST00000474387 401 ntBASIC1.93□□□□□ -2.1
RAF1P04049 RNU5F-4P-201ENST00000516581 114 ntBASIC1.93□□□□□ -2.1
RAF1P04049 RNU6-1012P-201ENST00000516606 109 ntBASIC1.93□□□□□ -2.1
RAF1P04049 RNU6-344P-201ENST00000516635 111 ntBASIC1.93□□□□□ -2.1
RAF1P04049 RNU2-19P-201ENST00000517288 84 ntBASIC1.93□□□□□ -2.1
RAF1P04049 AC022616.4-201ENST00000522985 181 ntBASIC1.93□□□□□ -2.1
RAF1P04049 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.93□□□□□ -2.1
RAF1P04049 AC113195.1-201ENST00000579952 141 ntBASIC1.93□□□□□ -2.1
RAF1P04049 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.93□□□□□ -2.1
RAF1P04049 AL357075.2-201ENST00000614906 189 ntBASIC1.93□□□□□ -2.1
RAF1P04049 U6.92-201ENST00000636464 89 ntBASIC1.93□□□□□ -2.1
RAF1P04049 CENPCP1-201ENST00000533085 2578 ntBASIC1.93□□□□□ -2.1
RAF1P04049 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.92□□□□□ -2.1
RAF1P04049 MTND5P35-201ENST00000557537 1720 ntBASIC1.92□□□□□ -2.1
RAF1P04049 AL356292.1-201ENST00000283110 373 ntBASIC1.92□□□□□ -2.1
RAF1P04049 RNU5F-3P-201ENST00000363767 117 ntBASIC1.92□□□□□ -2.1
RAF1P04049 Y_RNA.338-201ENST00000365320 114 ntBASIC1.92□□□□□ -2.1
RAF1P04049 Y_RNA.455-201ENST00000384230 98 ntBASIC1.92□□□□□ -2.1
RAF1P04049 SNORA67.2-201ENST00000384300 149 ntBASIC1.92□□□□□ -2.1
RAF1P04049 AL033519.2-201ENST00000403958 392 ntBASIC1.92□□□□□ -2.1
RAF1P04049 SNORD12B-201ENST00000410433 91 ntBASIC1.92□□□□□ -2.1
RAF1P04049 RNA5SP504-201ENST00000410676 117 ntBASIC1.92□□□□□ -2.1
RAF1P04049 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.92□□□□□ -2.1
RAF1P04049 MTND2P23-201ENST00000422990 651 ntBASIC1.92□□□□□ -2.1
RAF1P04049 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.92□□□□□ -2.1
RAF1P04049 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RAF1P04049 RNA5SP233-201ENST00000459153 113 ntBASIC1.92□□□□□ -2.1
RAF1P04049 RNU7-14P-201ENST00000459331 62 ntBASIC1.92□□□□□ -2.1
RAF1P04049 U8.20-201ENST00000459445 131 ntBASIC1.92□□□□□ -2.1
RAF1P04049 RNU6-764P-201ENST00000516396 105 ntBASIC1.92□□□□□ -2.1
RAF1P04049 Y_RNA.683-201ENST00000516508 93 ntBASIC1.92□□□□□ -2.1
RAF1P04049 Y_RNA.721-201ENST00000517207 102 ntBASIC1.92□□□□□ -2.1
RAF1P04049 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.92□□□□□ -2.1
RAF1P04049 MIR3935-201ENST00000583472 104 ntBASIC1.92□□□□□ -2.1
RAF1P04049 RPS29P30-201ENST00000600975 111 ntBASIC1.92□□□□□ -2.1
RAF1P04049 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
RAF1P04049 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
RAF1P04049 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.91□□□□□ -2.1
RAF1P04049 Y_RNA.153-201ENST00000363615 91 ntBASIC1.91□□□□□ -2.1
RAF1P04049 Y_RNA.415-201ENST00000384012 112 ntBASIC1.91□□□□□ -2.1
RAF1P04049 RNU6-926P-201ENST00000384075 107 ntBASIC1.91□□□□□ -2.1
RAF1P04049 MIR221-201ENST00000385135 110 ntBASIC1.91□□□□□ -2.1
RAF1P04049 MIR29C-201ENST00000385231 88 ntBASIC1.91□□□□□ -2.1
RAF1P04049 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms