Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 EIF1P2-201ENST00000428233 350 ntBASIC1.86□□□□□ -2.11
VTNP04004 RNU6-107P-201ENST00000516643 102 ntBASIC1.86□□□□□ -2.11
VTNP04004 RNU6-1153P-201ENST00000516760 105 ntBASIC1.86□□□□□ -2.11
VTNP04004 AC091144.1-201ENST00000519573 138 ntBASIC1.86□□□□□ -2.11
VTNP04004 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.86□□□□□ -2.11
VTNP04004 MIR3935-201ENST00000583472 104 ntBASIC1.86□□□□□ -2.11
VTNP04004 uc_338.22-201ENST00000622722 187 ntBASIC1.86□□□□□ -2.11
VTNP04004 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.86□□□□□ -2.11
VTNP04004 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.86□□□□□ -2.11
VTNP04004 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
VTNP04004 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
VTNP04004 RNU6-661P-201ENST00000362409 107 ntBASIC1.85□□□□□ -2.11
VTNP04004 Y_RNA.31-201ENST00000362574 102 ntBASIC1.85□□□□□ -2.11
VTNP04004 RNA5SP361-201ENST00000362686 118 ntBASIC1.85□□□□□ -2.11
VTNP04004 RNU5F-3P-201ENST00000363767 117 ntBASIC1.85□□□□□ -2.11
VTNP04004 Y_RNA.415-201ENST00000384012 112 ntBASIC1.85□□□□□ -2.11
VTNP04004 RNU6-926P-201ENST00000384075 107 ntBASIC1.85□□□□□ -2.11
VTNP04004 RNU6-474P-201ENST00000384243 107 ntBASIC1.85□□□□□ -2.11
VTNP04004 SNORD14D-201ENST00000384390 87 ntBASIC1.85□□□□□ -2.11
VTNP04004 Y_RNA.496-201ENST00000384444 101 ntBASIC1.85□□□□□ -2.11
VTNP04004 RNU1-139P-201ENST00000391307 165 ntBASIC1.85□□□□□ -2.11
VTNP04004 MIR1283-1-201ENST00000408494 87 ntBASIC1.85□□□□□ -2.11
VTNP04004 MIR1283-2-201ENST00000408621 87 ntBASIC1.85□□□□□ -2.11
VTNP04004 Y_RNA.595-201ENST00000410403 105 ntBASIC1.85□□□□□ -2.11
VTNP04004 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.85□□□□□ -2.11
VTNP04004 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.85□□□□□ -2.11
VTNP04004 AC091179.3-201ENST00000474761 144 ntBASIC1.85□□□□□ -2.11
VTNP04004 Y_RNA.701-201ENST00000516812 110 ntBASIC1.85□□□□□ -2.11
VTNP04004 AP005660.1-201ENST00000522972 293 ntBASIC1.85□□□□□ -2.11
VTNP04004 HSBP1P1-201ENST00000555205 166 ntBASIC1.85□□□□□ -2.11
VTNP04004 AC006600.1-201ENST00000572529 153 ntBASIC1.85□□□□□ -2.11
VTNP04004 MIR4255-201ENST00000579351 72 ntBASIC1.85□□□□□ -2.11
VTNP04004 AC007485.1-201ENST00000616755 206 ntBASIC1.85□□□□□ -2.11
VTNP04004 U2.1-201ENST00000618978 145 ntBASIC1.85□□□□□ -2.11
VTNP04004 uc_338.20-201ENST00000621563 178 ntBASIC1.85□□□□□ -2.11
VTNP04004 AC022140.2-201ENST00000623500 188 ntBASIC1.85□□□□□ -2.11
VTNP04004 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
VTNP04004 MTND5P35-201ENST00000557537 1720 ntBASIC1.85□□□□□ -2.11
VTNP04004 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
VTNP04004 AC008555.8-201ENST00000623602 2168 ntBASIC1.84□□□□□ -2.11
VTNP04004 RNU1-62P-201ENST00000362599 164 ntBASIC1.84□□□□□ -2.11
VTNP04004 Y_RNA.39-201ENST00000362620 98 ntBASIC1.84□□□□□ -2.11
VTNP04004 RNU6-1164P-201ENST00000364428 107 ntBASIC1.84□□□□□ -2.11
VTNP04004 Y_RNA.252-201ENST00000364556 101 ntBASIC1.84□□□□□ -2.11
VTNP04004 RNU4-42P-201ENST00000364738 142 ntBASIC1.84□□□□□ -2.11
VTNP04004 Y_RNA.338-201ENST00000365320 114 ntBASIC1.84□□□□□ -2.11
VTNP04004 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
VTNP04004 MIR300-201ENST00000401138 83 ntBASIC1.84□□□□□ -2.11
VTNP04004 SUMO2P12-201ENST00000405924 140 ntBASIC1.84□□□□□ -2.11
VTNP04004 RNU4-62P-201ENST00000410125 130 ntBASIC1.84□□□□□ -2.11
VTNP04004 AC096920.1-201ENST00000423991 241 ntBASIC1.84□□□□□ -2.11
VTNP04004 AC139712.2-201ENST00000424302 339 ntBASIC1.84□□□□□ -2.11
VTNP04004 AC016717.1-201ENST00000448918 286 ntBASIC1.84□□□□□ -2.11
VTNP04004 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
VTNP04004 AC125232.2-201ENST00000592457 143 ntBASIC1.84□□□□□ -2.11
VTNP04004 SNORD11B-201ENST00000607707 90 ntBASIC1.84□□□□□ -2.11
VTNP04004 AC130454.1-201ENST00000622948 401 ntBASIC1.84□□□□□ -2.11
VTNP04004 SNORD42.2-201ENST00000365570 69 ntBASIC1.83□□□□□ -2.12
VTNP04004 RNU6-708P-201ENST00000384217 107 ntBASIC1.83□□□□□ -2.12
VTNP04004 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
VTNP04004 AC123900.1-201ENST00000420390 96 ntBASIC1.83□□□□□ -2.12
VTNP04004 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.83□□□□□ -2.12
VTNP04004 BX510359.4-201ENST00000423750 193 ntBASIC1.83□□□□□ -2.12
VTNP04004 AL160004.2-201ENST00000432935 350 ntBASIC1.83□□□□□ -2.12
VTNP04004 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.83□□□□□ -2.12
VTNP04004 CHEK2P4-201ENST00000450340 246 ntBASIC1.83□□□□□ -2.12
VTNP04004 RPS27P21-201ENST00000486977 252 ntBASIC1.83□□□□□ -2.12
VTNP04004 Y_RNA.683-201ENST00000516508 93 ntBASIC1.83□□□□□ -2.12
VTNP04004 RNU6-344P-201ENST00000516635 111 ntBASIC1.83□□□□□ -2.12
VTNP04004 CBX3P4-201ENST00000538909 354 ntBASIC1.83□□□□□ -2.12
VTNP04004 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.83□□□□□ -2.12
VTNP04004 MIR3618-201ENST00000580330 88 ntBASIC1.83□□□□□ -2.12
VTNP04004 AL078596.1-201ENST00000624856 447 ntBASIC1.83□□□□□ -2.12
VTNP04004 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.83□□□□□ -2.12
VTNP04004 AC009487.4-201ENST00000624969 3585 ntBASIC1.83□□□□□ -2.12
VTNP04004 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
VTNP04004 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
VTNP04004 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
VTNP04004 RNA5SP276-201ENST00000362580 94 ntBASIC1.82□□□□□ -2.12
VTNP04004 Y_RNA.128-201ENST00000363391 112 ntBASIC1.82□□□□□ -2.12
VTNP04004 Y_RNA.332-201ENST00000365271 113 ntBASIC1.82□□□□□ -2.12
VTNP04004 RNY1P14-201ENST00000384426 108 ntBASIC1.82□□□□□ -2.12
VTNP04004 MIR329-1-201ENST00000385028 80 ntBASIC1.82□□□□□ -2.12
VTNP04004 AL078595.1-201ENST00000404458 226 ntBASIC1.82□□□□□ -2.12
VTNP04004 AL512604.1-201ENST00000404812 257 ntBASIC1.82□□□□□ -2.12
VTNP04004 AL356379.1-201ENST00000414105 126 ntBASIC1.82□□□□□ -2.12
VTNP04004 HMGN2P19-201ENST00000425149 265 ntBASIC1.82□□□□□ -2.12
VTNP04004 AL137792.2-201ENST00000443484 235 ntBASIC1.82□□□□□ -2.12
VTNP04004 UQCRBP2-201ENST00000447827 297 ntBASIC1.82□□□□□ -2.12
VTNP04004 Y_RNA.639-201ENST00000458981 102 ntBASIC1.82□□□□□ -2.12
VTNP04004 RNU7-57P-201ENST00000459540 60 ntBASIC1.82□□□□□ -2.12
VTNP04004 Y_RNA.631-201ENST00000459607 101 ntBASIC1.82□□□□□ -2.12
VTNP04004 RNU4-77P-201ENST00000516692 156 ntBASIC1.82□□□□□ -2.12
VTNP04004 RN7SKP295-201ENST00000517264 153 ntBASIC1.82□□□□□ -2.12
VTNP04004 MIR4287-201ENST00000579398 78 ntBASIC1.82□□□□□ -2.12
VTNP04004 AL162373.1-201ENST00000620433 407 ntBASIC1.82□□□□□ -2.12
VTNP04004 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.81□□□□□ -2.12
VTNP04004 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
VTNP04004 ZNF702P-202ENST00000434269 1966 ntBASIC1.81□□□□□ -2.12
VTNP04004 MIR378A-201ENST00000362177 66 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms