Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
MT-ND1P03886 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
MT-ND1P03886 RNU6-1301P-201ENST00000362724 104 ntBASIC1.65□□□□□ -2.15
MT-ND1P03886 Y_RNA.132-201ENST00000363421 102 ntBASIC1.65□□□□□ -2.15
MT-ND1P03886 Y_RNA.179-201ENST00000363844 90 ntBASIC1.65□□□□□ -2.15
MT-ND1P03886 RNU6-1305P-201ENST00000364353 104 ntBASIC1.65□□□□□ -2.15
MT-ND1P03886 RNU6-793P-201ENST00000384233 104 ntBASIC1.65□□□□□ -2.15
MT-ND1P03886 Y_RNA.460-201ENST00000384255 102 ntBASIC1.65□□□□□ -2.15
MT-ND1P03886 RNY1P14-201ENST00000384426 108 ntBASIC1.65□□□□□ -2.15
MT-ND1P03886 RNU6-1026P-201ENST00000384465 108 ntBASIC1.65□□□□□ -2.15
MT-ND1P03886 Y_RNA.500-201ENST00000384466 111 ntBASIC1.65□□□□□ -2.15
MT-ND1P03886 MIR625-201ENST00000385047 85 ntBASIC1.65□□□□□ -2.15
MT-ND1P03886 AC114482.1-201ENST00000418010 247 ntBASIC1.65□□□□□ -2.15
MT-ND1P03886 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.65□□□□□ -2.15
MT-ND1P03886 Y_RNA.661-201ENST00000516003 99 ntBASIC1.65□□□□□ -2.15
MT-ND1P03886 RNU4-77P-201ENST00000516692 156 ntBASIC1.65□□□□□ -2.15
MT-ND1P03886 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.65□□□□□ -2.15
MT-ND1P03886 MIR3618-201ENST00000580330 88 ntBASIC1.65□□□□□ -2.15
MT-ND1P03886 AC116312.1-201ENST00000606841 314 ntBASIC1.65□□□□□ -2.15
MT-ND1P03886 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.65□□□□□ -2.15
MT-ND1P03886 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.65□□□□□ -2.15
MT-ND1P03886 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.65□□□□□ -2.15
MT-ND1P03886 MTND5P35-201ENST00000557537 1720 ntBASIC1.65□□□□□ -2.15
MT-ND1P03886 LINC02555-201ENST00000563933 1951 ntBASIC1.65□□□□□ -2.15
MT-ND1P03886 Y_RNA.112-201ENST00000363250 102 ntBASIC1.64□□□□□ -2.15
MT-ND1P03886 RNU6-879P-201ENST00000364328 108 ntBASIC1.64□□□□□ -2.15
MT-ND1P03886 Y_RNA.428-201ENST00000384078 102 ntBASIC1.64□□□□□ -2.15
MT-ND1P03886 Y_RNA.431-201ENST00000384086 102 ntBASIC1.64□□□□□ -2.15
MT-ND1P03886 MIR586-201ENST00000385035 97 ntBASIC1.64□□□□□ -2.15
MT-ND1P03886 MIR548B-201ENST00000385247 97 ntBASIC1.64□□□□□ -2.15
MT-ND1P03886 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
MT-ND1P03886 MIR300-201ENST00000401138 83 ntBASIC1.64□□□□□ -2.15
MT-ND1P03886 MIR320B2-201ENST00000408479 138 ntBASIC1.64□□□□□ -2.15
MT-ND1P03886 AL445685.2-201ENST00000422551 342 ntBASIC1.64□□□□□ -2.15
MT-ND1P03886 RPL31P63-201ENST00000422565 375 ntBASIC1.64□□□□□ -2.15
MT-ND1P03886 PMCHL1-202ENST00000423102 261 ntBASIC1.64□□□□□ -2.15
MT-ND1P03886 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.64□□□□□ -2.15
MT-ND1P03886 MTND4P28-201ENST00000426217 387 ntBASIC1.64□□□□□ -2.15
MT-ND1P03886 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.64□□□□□ -2.15
MT-ND1P03886 AC099799.1-201ENST00000439809 192 ntBASIC1.64□□□□□ -2.15
MT-ND1P03886 AC007395.1-201ENST00000451333 677 ntBASIC1.64□□□□□ -2.15
MT-ND1P03886 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.64□□□□□ -2.15
MT-ND1P03886 RNU1-131P-201ENST00000458943 161 ntBASIC1.64□□□□□ -2.15
MT-ND1P03886 AC008834.1-201ENST00000511612 175 ntBASIC1.64□□□□□ -2.15
MT-ND1P03886 RNU6-1170P-201ENST00000515974 106 ntBASIC1.64□□□□□ -2.15
MT-ND1P03886 RNU6-976P-201ENST00000516086 111 ntBASIC1.64□□□□□ -2.15
MT-ND1P03886 RNU6-1153P-201ENST00000516760 105 ntBASIC1.64□□□□□ -2.15
MT-ND1P03886 SNORD116.3-201ENST00000517176 78 ntBASIC1.64□□□□□ -2.15
MT-ND1P03886 MIR3198-2-201ENST00000577868 80 ntBASIC1.64□□□□□ -2.15
MT-ND1P03886 MIR3169-201ENST00000578032 83 ntBASIC1.64□□□□□ -2.15
MT-ND1P03886 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.64□□□□□ -2.15
MT-ND1P03886 AC092447.9-201ENST00000603395 144 ntBASIC1.64□□□□□ -2.15
MT-ND1P03886 AC010900.2-201ENST00000604508 210 ntBASIC1.64□□□□□ -2.15
MT-ND1P03886 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.64□□□□□ -2.15
MT-ND1P03886 SNORD58B-201ENST00000607313 66 ntBASIC1.64□□□□□ -2.15
MT-ND1P03886 SNORD11B-201ENST00000607707 90 ntBASIC1.64□□□□□ -2.15
MT-ND1P03886 AC007485.1-201ENST00000616755 206 ntBASIC1.64□□□□□ -2.15
MT-ND1P03886 AC090971.5-201ENST00000621102 293 ntBASIC1.64□□□□□ -2.15
MT-ND1P03886 AC008873.1-201ENST00000625051 138 ntBASIC1.64□□□□□ -2.15
MT-ND1P03886 MIR4272-201ENST00000635924 64 ntBASIC1.64□□□□□ -2.15
MT-ND1P03886 AC068205.3-201ENST00000636385 468 ntBASIC1.64□□□□□ -2.15
MT-ND1P03886 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
MT-ND1P03886 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.64□□□□□ -2.15
MT-ND1P03886 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
MT-ND1P03886 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
MT-ND1P03886 U8.2-201ENST00000363156 134 ntBASIC1.63□□□□□ -2.15
MT-ND1P03886 RNU6-975P-201ENST00000384296 105 ntBASIC1.63□□□□□ -2.15
MT-ND1P03886 Y_RNA.605-201ENST00000410577 105 ntBASIC1.63□□□□□ -2.15
MT-ND1P03886 ELOCP21-201ENST00000412558 336 ntBASIC1.63□□□□□ -2.15
MT-ND1P03886 HSPE1P21-201ENST00000438283 308 ntBASIC1.63□□□□□ -2.15
MT-ND1P03886 AC112492.4-201ENST00000456549 352 ntBASIC1.63□□□□□ -2.15
MT-ND1P03886 RNA5SP182-201ENST00000516064 82 ntBASIC1.63□□□□□ -2.15
MT-ND1P03886 RNU7-4P-201ENST00000516961 62 ntBASIC1.63□□□□□ -2.15
MT-ND1P03886 HSBP1P1-201ENST00000555205 166 ntBASIC1.63□□□□□ -2.15
MT-ND1P03886 AC091544.4-201ENST00000555268 342 ntBASIC1.63□□□□□ -2.15
MT-ND1P03886 AC005786.1-201ENST00000588553 154 ntBASIC1.63□□□□□ -2.15
MT-ND1P03886 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.63□□□□□ -2.15
MT-ND1P03886 AC022513.1-201ENST00000624512 117 ntBASIC1.63□□□□□ -2.15
MT-ND1P03886 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
MT-ND1P03886 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.63□□□□□ -2.15
MT-ND1P03886 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.63□□□□□ -2.15
MT-ND1P03886 AL356292.1-201ENST00000283110 373 ntBASIC1.62□□□□□ -2.15
MT-ND1P03886 Y_RNA.216-201ENST00000364205 93 ntBASIC1.62□□□□□ -2.15
MT-ND1P03886 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.62□□□□□ -2.15
MT-ND1P03886 MIR9-3-201ENST00000385084 90 ntBASIC1.62□□□□□ -2.15
MT-ND1P03886 RPS20P15-201ENST00000412792 311 ntBASIC1.62□□□□□ -2.15
MT-ND1P03886 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.62□□□□□ -2.15
MT-ND1P03886 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.62□□□□□ -2.15
MT-ND1P03886 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.62□□□□□ -2.15
MT-ND1P03886 RNU7-57P-201ENST00000459540 60 ntBASIC1.62□□□□□ -2.15
MT-ND1P03886 RNVU1-2-201ENST00000516326 135 ntBASIC1.62□□□□□ -2.15
MT-ND1P03886 Y_RNA.683-201ENST00000516508 93 ntBASIC1.62□□□□□ -2.15
MT-ND1P03886 Y_RNA.701-201ENST00000516812 110 ntBASIC1.62□□□□□ -2.15
MT-ND1P03886 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.62□□□□□ -2.15
MT-ND1P03886 AC091144.1-201ENST00000519573 138 ntBASIC1.62□□□□□ -2.15
MT-ND1P03886 AC144568.1-201ENST00000520139 137 ntBASIC1.62□□□□□ -2.15
MT-ND1P03886 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.62□□□□□ -2.15
MT-ND1P03886 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.62□□□□□ -2.15
MT-ND1P03886 MIR4753-201ENST00000585119 83 ntBASIC1.62□□□□□ -2.15
MT-ND1P03886 U2.1-201ENST00000618978 145 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 148.9 ms