Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 MIR450B-201ENST00000401182 78 ntBASIC0.17□□□□□ -2.38
APOEP02649 MIR1185-2-201ENST00000408687 86 ntBASIC0.17□□□□□ -2.38
APOEP02649 MRPS18CP6-201ENST00000423587 223 ntBASIC0.17□□□□□ -2.38
APOEP02649 RPL31P35-201ENST00000431058 377 ntBASIC0.17□□□□□ -2.38
APOEP02649 MTCO1P19-201ENST00000443487 500 ntBASIC0.17□□□□□ -2.38
APOEP02649 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.17□□□□□ -2.38
APOEP02649 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC0.17□□□□□ -2.38
APOEP02649 RNU6-1037P-201ENST00000459571 107 ntBASIC0.17□□□□□ -2.38
APOEP02649 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.17□□□□□ -2.38
APOEP02649 UBE2V1P12-201ENST00000503954 474 ntBASIC0.17□□□□□ -2.38
APOEP02649 Y_RNA.670-201ENST00000516255 105 ntBASIC0.17□□□□□ -2.38
APOEP02649 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.17□□□□□ -2.38
APOEP02649 MIR5583-1-201ENST00000580941 59 ntBASIC0.17□□□□□ -2.38
APOEP02649 MIR548AB-201ENST00000584917 84 ntBASIC0.17□□□□□ -2.38
APOEP02649 AL138726.1-201ENST00000614873 333 ntBASIC0.17□□□□□ -2.38
APOEP02649 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
APOEP02649 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.16□□□□□ -2.38
APOEP02649 Y_RNA.100-201ENST00000363141 102 ntBASIC0.16□□□□□ -2.38
APOEP02649 SNORA25.3-201ENST00000363205 127 ntBASIC0.16□□□□□ -2.38
APOEP02649 SNORD114-26-201ENST00000363543 72 ntBASIC0.16□□□□□ -2.38
APOEP02649 SNORD87-201ENST00000364849 89 ntBASIC0.16□□□□□ -2.38
APOEP02649 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.16□□□□□ -2.38
APOEP02649 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.16□□□□□ -2.38
APOEP02649 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.16□□□□□ -2.38
APOEP02649 AP000870.1-201ENST00000472927 406 ntBASIC0.16□□□□□ -2.38
APOEP02649 AC108740.1-201ENST00000498629 225 ntBASIC0.16□□□□□ -2.38
APOEP02649 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.16□□□□□ -2.38
APOEP02649 RNU6-58P-201ENST00000517143 103 ntBASIC0.16□□□□□ -2.38
APOEP02649 AP003716.2-201ENST00000528260 108 ntBASIC0.16□□□□□ -2.38
APOEP02649 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC0.16□□□□□ -2.38
APOEP02649 ELOCP32-201ENST00000548625 324 ntBASIC0.16□□□□□ -2.38
APOEP02649 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC0.16□□□□□ -2.38
APOEP02649 MIR1273G-201ENST00000577677 100 ntBASIC0.16□□□□□ -2.38
APOEP02649 MIR4514-201ENST00000581410 57 ntBASIC0.16□□□□□ -2.38
APOEP02649 MIR4438-201ENST00000585271 93 ntBASIC0.16□□□□□ -2.38
APOEP02649 SNORD11B-201ENST00000607707 90 ntBASIC0.16□□□□□ -2.38
APOEP02649 AC006566.1-201ENST00000608943 513 ntBASIC0.16□□□□□ -2.38
APOEP02649 AC137590.2-201ENST00000619709 240 ntBASIC0.16□□□□□ -2.38
APOEP02649 MIR6079-201ENST00000635807 62 ntBASIC0.16□□□□□ -2.38
APOEP02649 MIR140-201ENST00000385282 100 ntBASIC0.15□□□□□ -2.39
APOEP02649 MIR320B2-201ENST00000408479 138 ntBASIC0.15□□□□□ -2.39
APOEP02649 MIR1185-1-201ENST00000408598 86 ntBASIC0.15□□□□□ -2.39
APOEP02649 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.15□□□□□ -2.39
APOEP02649 AC023157.2-201ENST00000540596 141 ntBASIC0.15□□□□□ -2.39
APOEP02649 AK6P2-201ENST00000549020 471 ntBASIC0.15□□□□□ -2.39
APOEP02649 AC005730.3-201ENST00000583067 366 ntBASIC0.15□□□□□ -2.39
APOEP02649 AL022161.1-201ENST00000604390 213 ntBASIC0.15□□□□□ -2.39
APOEP02649 TUSC7.1-201ENST00000610969 165 ntBASIC0.15□□□□□ -2.39
APOEP02649 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
APOEP02649 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.14□□□□□ -2.39
APOEP02649 AC090625.1-201ENST00000357130 210 ntBASIC0.14□□□□□ -2.39
APOEP02649 MIRLET7C-201ENST00000362160 84 ntBASIC0.14□□□□□ -2.39
APOEP02649 RNU6-349P-201ENST00000362402 107 ntBASIC0.14□□□□□ -2.39
APOEP02649 RNU4-41P-201ENST00000364426 143 ntBASIC0.14□□□□□ -2.39
APOEP02649 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.14□□□□□ -2.39
APOEP02649 AC009961.2-201ENST00000435771 251 ntBASIC0.14□□□□□ -2.39
APOEP02649 MTCO2P18-201ENST00000457151 658 ntBASIC0.14□□□□□ -2.39
APOEP02649 AC067940.1-201ENST00000458411 300 ntBASIC0.14□□□□□ -2.39
APOEP02649 RNU7-138P-201ENST00000459479 64 ntBASIC0.14□□□□□ -2.39
APOEP02649 GMFBP1-201ENST00000467831 427 ntBASIC0.14□□□□□ -2.39
APOEP02649 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.14□□□□□ -2.39
APOEP02649 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.14□□□□□ -2.39
APOEP02649 SNORA62.5-201ENST00000516634 120 ntBASIC0.14□□□□□ -2.39
APOEP02649 MTND1P5-201ENST00000517906 940 ntBASIC0.14□□□□□ -2.39
APOEP02649 MIR3941-201ENST00000582572 103 ntBASIC0.14□□□□□ -2.39
APOEP02649 FGF7P1-201ENST00000582820 288 ntBASIC0.14□□□□□ -2.39
APOEP02649 7SK.7-201ENST00000603504 247 ntBASIC0.14□□□□□ -2.39
APOEP02649 AC064836.2-201ENST00000609491 462 ntBASIC0.14□□□□□ -2.39
APOEP02649 U2.17-201ENST00000611454 95 ntBASIC0.14□□□□□ -2.39
APOEP02649 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.14□□□□□ -2.39
APOEP02649 OR5AK4P-201ENST00000635912 903 ntBASIC0.14□□□□□ -2.39
APOEP02649 RNU6-1266P-201ENST00000362794 105 ntBASIC0.13□□□□□ -2.39
APOEP02649 RNU6-1317P-201ENST00000364582 104 ntBASIC0.13□□□□□ -2.39
APOEP02649 RNU6-1297P-201ENST00000384415 104 ntBASIC0.13□□□□□ -2.39
APOEP02649 SNORD105-201ENST00000386910 85 ntBASIC0.13□□□□□ -2.39
APOEP02649 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.13□□□□□ -2.39
APOEP02649 AC093019.1-201ENST00000443135 252 ntBASIC0.13□□□□□ -2.39
APOEP02649 AC091133.4-201ENST00000511142 308 ntBASIC0.13□□□□□ -2.39
APOEP02649 RNU2-56P-201ENST00000516826 190 ntBASIC0.13□□□□□ -2.39
APOEP02649 RNU6-1116P-201ENST00000517269 99 ntBASIC0.13□□□□□ -2.39
APOEP02649 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.13□□□□□ -2.39
APOEP02649 AC027288.2-201ENST00000553028 243 ntBASIC0.13□□□□□ -2.39
APOEP02649 AC023932.2-201ENST00000603176 175 ntBASIC0.13□□□□□ -2.39
APOEP02649 AL136317.1-201ENST00000612653 226 ntBASIC0.13□□□□□ -2.39
APOEP02649 AC091925.1-201ENST00000623204 462 ntBASIC0.13□□□□□ -2.39
APOEP02649 AC010608.3-201ENST00000625048 527 ntBASIC0.13□□□□□ -2.39
APOEP02649 MIR103A1-201ENST00000362165 78 ntBASIC0.12□□□□□ -2.39
APOEP02649 MIR330-201ENST00000362196 94 ntBASIC0.12□□□□□ -2.39
APOEP02649 RNU4-67P-201ENST00000364569 141 ntBASIC0.12□□□□□ -2.39
APOEP02649 RNU6-1327P-201ENST00000365302 105 ntBASIC0.12□□□□□ -2.39
APOEP02649 RNU6-994P-201ENST00000410507 111 ntBASIC0.12□□□□□ -2.39
APOEP02649 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.12□□□□□ -2.39
APOEP02649 HMGN2P26-201ENST00000463169 339 ntBASIC0.12□□□□□ -2.39
APOEP02649 AC036111.3-201ENST00000526389 112 ntBASIC0.12□□□□□ -2.39
APOEP02649 AL137161.1-201ENST00000532231 390 ntBASIC0.12□□□□□ -2.39
APOEP02649 MIR3682-201ENST00000581338 84 ntBASIC0.12□□□□□ -2.39
APOEP02649 AL390237.1-201ENST00000404226 1415 ntBASIC0.12□□□□□ -2.39
APOEP02649 RNU6-222P-201ENST00000362438 107 ntBASIC0.11□□□□□ -2.39
APOEP02649 Y_RNA.267-201ENST00000364679 109 ntBASIC0.11□□□□□ -2.39
APOEP02649 RNU6-793P-201ENST00000384233 104 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms