Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 CYCSP46-201ENST00000423569 204 ntBASIC0.29□□□□□ -2.36
APOA1P02647 MTCO1P19-201ENST00000443487 500 ntBASIC0.29□□□□□ -2.36
APOA1P02647 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.29□□□□□ -2.36
APOA1P02647 SNORD65B-201ENST00000459126 73 ntBASIC0.29□□□□□ -2.36
APOA1P02647 AP000870.1-201ENST00000472927 406 ntBASIC0.29□□□□□ -2.36
APOA1P02647 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.29□□□□□ -2.36
APOA1P02647 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.29□□□□□ -2.36
APOA1P02647 SNORA68.3-201ENST00000515906 83 ntBASIC0.29□□□□□ -2.36
APOA1P02647 SNORA25.14-201ENST00000516481 132 ntBASIC0.29□□□□□ -2.36
APOA1P02647 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.29□□□□□ -2.36
APOA1P02647 7SK.7-201ENST00000603504 247 ntBASIC0.29□□□□□ -2.36
APOA1P02647 MIR8076-201ENST00000611401 83 ntBASIC0.29□□□□□ -2.36
APOA1P02647 AC100810.6-201ENST00000638068 285 ntBASIC0.29□□□□□ -2.36
APOA1P02647 MTND5P16-201ENST00000460269 1703 ntBASIC0.28□□□□□ -2.36
APOA1P02647 RNU6-727P-201ENST00000363592 107 ntBASIC0.28□□□□□ -2.36
APOA1P02647 Y_RNA.415-201ENST00000384012 112 ntBASIC0.28□□□□□ -2.36
APOA1P02647 RNA5SP482-201ENST00000391269 118 ntBASIC0.28□□□□□ -2.36
APOA1P02647 MTCYBP10-201ENST00000424905 650 ntBASIC0.28□□□□□ -2.36
APOA1P02647 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.28□□□□□ -2.36
APOA1P02647 RNU6-189P-201ENST00000516120 101 ntBASIC0.28□□□□□ -2.36
APOA1P02647 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.28□□□□□ -2.36
APOA1P02647 AC010620.1-201ENST00000601088 1102 ntBASIC0.28□□□□□ -2.36
APOA1P02647 snoU13.31-201ENST00000607291 104 ntBASIC0.28□□□□□ -2.36
APOA1P02647 RNU6-94P-201ENST00000607728 107 ntBASIC0.28□□□□□ -2.36
APOA1P02647 AL390237.1-201ENST00000404226 1415 ntBASIC0.28□□□□□ -2.37
APOA1P02647 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.28□□□□□ -2.37
APOA1P02647 MIRLET7C-201ENST00000362160 84 ntBASIC0.27□□□□□ -2.37
APOA1P02647 SNORA1B-201ENST00000362535 133 ntBASIC0.27□□□□□ -2.37
APOA1P02647 RNU6-793P-201ENST00000384233 104 ntBASIC0.27□□□□□ -2.37
APOA1P02647 MIR562-201ENST00000384894 95 ntBASIC0.27□□□□□ -2.37
APOA1P02647 RNU6-584P-201ENST00000410350 95 ntBASIC0.27□□□□□ -2.37
APOA1P02647 MTATP6P18-201ENST00000417994 673 ntBASIC0.27□□□□□ -2.37
APOA1P02647 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.27□□□□□ -2.37
APOA1P02647 RNU7-63P-201ENST00000459054 62 ntBASIC0.27□□□□□ -2.37
APOA1P02647 AC091021.1-201ENST00000468051 388 ntBASIC0.27□□□□□ -2.37
APOA1P02647 AC097462.1-201ENST00000514125 324 ntBASIC0.27□□□□□ -2.37
APOA1P02647 RNA5SP458-201ENST00000516188 119 ntBASIC0.27□□□□□ -2.37
APOA1P02647 RNU7-172P-201ENST00000517125 64 ntBASIC0.27□□□□□ -2.37
APOA1P02647 RPL21P9-201ENST00000556149 474 ntBASIC0.27□□□□□ -2.37
APOA1P02647 AC006435.5-201ENST00000624486 112 ntBASIC0.27□□□□□ -2.37
APOA1P02647 RNA5SP347-201ENST00000362445 119 ntBASIC0.26□□□□□ -2.37
APOA1P02647 SNORD115-8-201ENST00000363856 82 ntBASIC0.26□□□□□ -2.37
APOA1P02647 SNORD115-38-201ENST00000365037 82 ntBASIC0.26□□□□□ -2.37
APOA1P02647 RNY1P8-201ENST00000383970 114 ntBASIC0.26□□□□□ -2.37
APOA1P02647 AL606923.1-201ENST00000406616 190 ntBASIC0.26□□□□□ -2.37
APOA1P02647 RNU6-994P-201ENST00000410507 111 ntBASIC0.26□□□□□ -2.37
APOA1P02647 RNU6-248P-201ENST00000410720 107 ntBASIC0.26□□□□□ -2.37
APOA1P02647 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.26□□□□□ -2.37
APOA1P02647 RNU6-341P-201ENST00000516973 96 ntBASIC0.26□□□□□ -2.37
APOA1P02647 AP002004.2-201ENST00000531656 154 ntBASIC0.26□□□□□ -2.37
APOA1P02647 AC027288.2-201ENST00000553028 243 ntBASIC0.26□□□□□ -2.37
APOA1P02647 AL359821.1-201ENST00000605519 182 ntBASIC0.26□□□□□ -2.37
APOA1P02647 AL357078.3-201ENST00000607528 618 ntBASIC0.26□□□□□ -2.37
APOA1P02647 AF246928.1-201ENST00000623768 87 ntBASIC0.26□□□□□ -2.37
APOA1P02647 SNORA25.3-201ENST00000363205 127 ntBASIC0.25□□□□□ -2.37
APOA1P02647 Y_RNA.336-201ENST00000365307 109 ntBASIC0.25□□□□□ -2.37
APOA1P02647 RNU6-996P-201ENST00000365438 107 ntBASIC0.25□□□□□ -2.37
APOA1P02647 RNU6-933P-201ENST00000384424 107 ntBASIC0.25□□□□□ -2.37
APOA1P02647 MIR891A-201ENST00000401237 79 ntBASIC0.25□□□□□ -2.37
APOA1P02647 MTCO3P19-201ENST00000415864 321 ntBASIC0.25□□□□□ -2.37
APOA1P02647 AC073415.1-201ENST00000449240 153 ntBASIC0.25□□□□□ -2.37
APOA1P02647 RNU7-125P-201ENST00000458760 62 ntBASIC0.25□□□□□ -2.37
APOA1P02647 TRMT112P2-201ENST00000512910 132 ntBASIC0.25□□□□□ -2.37
APOA1P02647 AC108729.3-201ENST00000513484 108 ntBASIC0.25□□□□□ -2.37
APOA1P02647 RNU6-1129P-201ENST00000515964 104 ntBASIC0.25□□□□□ -2.37
APOA1P02647 RNU6-229P-201ENST00000516614 102 ntBASIC0.25□□□□□ -2.37
APOA1P02647 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.25□□□□□ -2.37
APOA1P02647 AC104383.1-201ENST00000530297 370 ntBASIC0.25□□□□□ -2.37
APOA1P02647 AL157687.1-201ENST00000554853 619 ntBASIC0.25□□□□□ -2.37
APOA1P02647 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
APOA1P02647 MTND4P12-201ENST00000498999 1377 ntBASIC0.24□□□□□ -2.37
APOA1P02647 MIRLET7D-201ENST00000362263 87 ntBASIC0.24□□□□□ -2.37
APOA1P02647 RNU6-873P-201ENST00000363833 107 ntBASIC0.24□□□□□ -2.37
APOA1P02647 Y_RNA.201-201ENST00000364052 96 ntBASIC0.24□□□□□ -2.37
APOA1P02647 RNU6-1297P-201ENST00000384415 104 ntBASIC0.24□□□□□ -2.37
APOA1P02647 MIR32-201ENST00000384965 70 ntBASIC0.24□□□□□ -2.37
APOA1P02647 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
APOA1P02647 MIR1185-1-201ENST00000408598 86 ntBASIC0.24□□□□□ -2.37
APOA1P02647 MTCO2P11-201ENST00000431069 680 ntBASIC0.24□□□□□ -2.37
APOA1P02647 MTND4P18-201ENST00000447010 465 ntBASIC0.24□□□□□ -2.37
APOA1P02647 TPTE2P5-203ENST00000458118 728 ntBASIC0.24□□□□□ -2.37
APOA1P02647 HMGN2P26-201ENST00000463169 339 ntBASIC0.24□□□□□ -2.37
APOA1P02647 MTND3P3-201ENST00000505004 126 ntBASIC0.24□□□□□ -2.37
APOA1P02647 RNU6-1198P-201ENST00000516904 67 ntBASIC0.24□□□□□ -2.37
APOA1P02647 RNU6-232P-201ENST00000517144 64 ntBASIC0.24□□□□□ -2.37
APOA1P02647 AP001372.4-201ENST00000524889 472 ntBASIC0.24□□□□□ -2.37
APOA1P02647 AP003716.2-201ENST00000528260 108 ntBASIC0.24□□□□□ -2.37
APOA1P02647 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.24□□□□□ -2.37
APOA1P02647 MIR4524B-201ENST00000581569 115 ntBASIC0.24□□□□□ -2.37
APOA1P02647 AL512605.2-201ENST00000592972 256 ntBASIC0.24□□□□□ -2.37
APOA1P02647 MIR96-201ENST00000362288 78 ntBASIC0.23□□□□□ -2.37
APOA1P02647 RNU1-93P-201ENST00000364704 169 ntBASIC0.23□□□□□ -2.37
APOA1P02647 MIR140-201ENST00000385282 100 ntBASIC0.23□□□□□ -2.37
APOA1P02647 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
APOA1P02647 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.23□□□□□ -2.37
APOA1P02647 MRPS18CP6-201ENST00000423587 223 ntBASIC0.23□□□□□ -2.37
APOA1P02647 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.23□□□□□ -2.37
APOA1P02647 MTCO1P29-201ENST00000496868 288 ntBASIC0.23□□□□□ -2.37
APOA1P02647 AC010598.1-201ENST00000510378 103 ntBASIC0.23□□□□□ -2.37
APOA1P02647 RNU6-1116P-201ENST00000517269 99 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 166.7 ms