Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 RNU6-296P-201ENST00000384608 107 ntBASIC0.65□□□□□ -2.3
COL4A1P02462 RNA5SP219-201ENST00000390940 113 ntBASIC0.65□□□□□ -2.3
COL4A1P02462 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
COL4A1P02462 MIR208B-201ENST00000401172 77 ntBASIC0.65□□□□□ -2.3
COL4A1P02462 RNA5SP511-201ENST00000410487 115 ntBASIC0.65□□□□□ -2.3
COL4A1P02462 RNA5SP494-201ENST00000410653 129 ntBASIC0.65□□□□□ -2.3
COL4A1P02462 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.65□□□□□ -2.3
COL4A1P02462 AC016717.1-201ENST00000448918 286 ntBASIC0.65□□□□□ -2.3
COL4A1P02462 MTCO3P8-201ENST00000453691 755 ntBASIC0.65□□□□□ -2.3
COL4A1P02462 PCMTD1P1-201ENST00000455560 355 ntBASIC0.65□□□□□ -2.3
COL4A1P02462 snoU13.9-201ENST00000458927 103 ntBASIC0.65□□□□□ -2.3
COL4A1P02462 RNU6-1208P-201ENST00000459588 107 ntBASIC0.65□□□□□ -2.3
COL4A1P02462 AL512360.1-201ENST00000555346 234 ntBASIC0.65□□□□□ -2.3
COL4A1P02462 AC245505.1-201ENST00000556398 224 ntBASIC0.65□□□□□ -2.3
COL4A1P02462 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.65□□□□□ -2.3
COL4A1P02462 HMGB1P33-201ENST00000563485 527 ntBASIC0.65□□□□□ -2.3
COL4A1P02462 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.65□□□□□ -2.3
COL4A1P02462 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.65□□□□□ -2.3
COL4A1P02462 MIR3611-201ENST00000584484 83 ntBASIC0.65□□□□□ -2.3
COL4A1P02462 AC243829.6-201ENST00000612652 106 ntBASIC0.65□□□□□ -2.3
COL4A1P02462 DISC2.1-201ENST00000612827 205 ntBASIC0.65□□□□□ -2.3
COL4A1P02462 MIR424-201ENST00000362227 98 ntBASIC0.65□□□□□ -2.31
COL4A1P02462 RNU6-222P-201ENST00000362438 107 ntBASIC0.65□□□□□ -2.31
COL4A1P02462 SNORD113-7-201ENST00000363762 77 ntBASIC0.65□□□□□ -2.31
COL4A1P02462 RNU6-877P-201ENST00000383868 107 ntBASIC0.65□□□□□ -2.31
COL4A1P02462 RNU6-1286P-201ENST00000383871 107 ntBASIC0.65□□□□□ -2.31
COL4A1P02462 RNU6-338P-201ENST00000383888 105 ntBASIC0.65□□□□□ -2.31
COL4A1P02462 RNU6-933P-201ENST00000384424 107 ntBASIC0.65□□□□□ -2.31
COL4A1P02462 MIR520A-201ENST00000384862 85 ntBASIC0.65□□□□□ -2.31
COL4A1P02462 MTCO3P40-201ENST00000392516 676 ntBASIC0.65□□□□□ -2.31
COL4A1P02462 EIF4E2P1-201ENST00000393781 255 ntBASIC0.65□□□□□ -2.31
COL4A1P02462 RNU6-325P-201ENST00000411132 105 ntBASIC0.65□□□□□ -2.31
COL4A1P02462 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.65□□□□□ -2.31
COL4A1P02462 ERLEC1P1-201ENST00000433806 578 ntBASIC0.65□□□□□ -2.31
COL4A1P02462 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.65□□□□□ -2.31
COL4A1P02462 AL359672.1-201ENST00000442302 409 ntBASIC0.65□□□□□ -2.31
COL4A1P02462 MTND1P11-201ENST00000456661 876 ntBASIC0.65□□□□□ -2.31
COL4A1P02462 RNU7-187P-201ENST00000458985 68 ntBASIC0.65□□□□□ -2.31
COL4A1P02462 AC019235.1-201ENST00000503847 207 ntBASIC0.65□□□□□ -2.31
COL4A1P02462 AC091435.1-201ENST00000505442 584 ntBASIC0.65□□□□□ -2.31
COL4A1P02462 SNORA25.14-201ENST00000516481 132 ntBASIC0.65□□□□□ -2.31
COL4A1P02462 SUMO2P18-201ENST00000518873 252 ntBASIC0.65□□□□□ -2.31
COL4A1P02462 SUMO2P16-201ENST00000519475 264 ntBASIC0.65□□□□□ -2.31
COL4A1P02462 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.65□□□□□ -2.31
COL4A1P02462 ZNF519P2-201ENST00000557032 169 ntBASIC0.65□□□□□ -2.31
COL4A1P02462 AC100830.2-201ENST00000581636 240 ntBASIC0.65□□□□□ -2.31
COL4A1P02462 AC103591.3-201ENST00000608684 209 ntBASIC0.65□□□□□ -2.31
COL4A1P02462 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
COL4A1P02462 BX322639.1-202ENST00000423987 2213 ntBASIC0.65□□□□□ -2.31
COL4A1P02462 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.64□□□□□ -2.31
COL4A1P02462 Y_RNA.123-201ENST00000363338 102 ntBASIC0.64□□□□□ -2.31
COL4A1P02462 RNU1-96P-201ENST00000364163 162 ntBASIC0.64□□□□□ -2.31
COL4A1P02462 RNU6-648P-201ENST00000410190 107 ntBASIC0.64□□□□□ -2.31
COL4A1P02462 AL135790.2-201ENST00000437701 267 ntBASIC0.64□□□□□ -2.31
COL4A1P02462 MTND1P1-201ENST00000445453 368 ntBASIC0.64□□□□□ -2.31
COL4A1P02462 HMGN2P9-201ENST00000476875 229 ntBASIC0.64□□□□□ -2.31
COL4A1P02462 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.64□□□□□ -2.31
COL4A1P02462 RNU1-142P-201ENST00000516682 145 ntBASIC0.64□□□□□ -2.31
COL4A1P02462 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.64□□□□□ -2.31
COL4A1P02462 AC025423.5-201ENST00000550230 219 ntBASIC0.64□□□□□ -2.31
COL4A1P02462 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.64□□□□□ -2.31
COL4A1P02462 MIR4636-201ENST00000582271 80 ntBASIC0.64□□□□□ -2.31
COL4A1P02462 NBR2-204ENST00000587322 63 ntBASIC0.64□□□□□ -2.31
COL4A1P02462 AP003465.2-201ENST00000602571 373 ntBASIC0.64□□□□□ -2.31
COL4A1P02462 AC087588.2-201ENST00000617667 426 ntBASIC0.64□□□□□ -2.31
COL4A1P02462 AC009248.2-201ENST00000619826 254 ntBASIC0.64□□□□□ -2.31
COL4A1P02462 AC097520.1-201ENST00000624435 385 ntBASIC0.64□□□□□ -2.31
COL4A1P02462 AC068137.3-201ENST00000639191 341 ntBASIC0.64□□□□□ -2.31
COL4A1P02462 ZNF204P-201ENST00000416749 2397 ntBASIC0.64□□□□□ -2.31
COL4A1P02462 RNU6-137P-201ENST00000363680 108 ntBASIC0.63□□□□□ -2.31
COL4A1P02462 SNORA63D-201ENST00000364359 132 ntBASIC0.63□□□□□ -2.31
COL4A1P02462 RNU6-1240P-201ENST00000365155 104 ntBASIC0.63□□□□□ -2.31
COL4A1P02462 RNU6-1026P-201ENST00000384465 108 ntBASIC0.63□□□□□ -2.31
COL4A1P02462 MIR32-201ENST00000384965 70 ntBASIC0.63□□□□□ -2.31
COL4A1P02462 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.63□□□□□ -2.31
COL4A1P02462 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.63□□□□□ -2.31
COL4A1P02462 AC004386.2-201ENST00000441858 148 ntBASIC0.63□□□□□ -2.31
COL4A1P02462 AC099513.1-201ENST00000490423 301 ntBASIC0.63□□□□□ -2.31
COL4A1P02462 UBL5P1-201ENST00000507979 193 ntBASIC0.63□□□□□ -2.31
COL4A1P02462 SNORA19.2-201ENST00000516013 114 ntBASIC0.63□□□□□ -2.31
COL4A1P02462 RNU6-902P-201ENST00000517212 91 ntBASIC0.63□□□□□ -2.31
COL4A1P02462 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.63□□□□□ -2.31
COL4A1P02462 APOOP3-201ENST00000536787 586 ntBASIC0.63□□□□□ -2.31
COL4A1P02462 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
COL4A1P02462 AL442163.3-201ENST00000554110 156 ntBASIC0.63□□□□□ -2.31
COL4A1P02462 PIGPP4-201ENST00000584447 307 ntBASIC0.63□□□□□ -2.31
COL4A1P02462 AC010525.2-201ENST00000590920 195 ntBASIC0.63□□□□□ -2.31
COL4A1P02462 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.63□□□□□ -2.31
COL4A1P02462 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.63□□□□□ -2.31
COL4A1P02462 Y_RNA.402-201ENST00000383972 102 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 SNORA32.2-201ENST00000384049 122 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 RNU6-790P-201ENST00000384479 105 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 MIR515-2-201ENST00000384883 83 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 MIR515-1-201ENST00000384884 83 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 AL117342.1-201ENST00000404861 406 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 MIR1185-2-201ENST00000408687 86 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 AC004866.1-201ENST00000411748 78 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 AL161935.2-201ENST00000414627 60 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 DLGAP5P1-201ENST00000430307 464 ntBASIC0.62□□□□□ -2.31
COL4A1P02462 AC245047.4-201ENST00000433189 144 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms