Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 MIR7154-201ENST00000620673 73 ntBASIC4.17□□□□□ -1.74
ALDH1A1P00352 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ALDH1A1P00352 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
ALDH1A1P00352 AC026241.1-201ENST00000517873 2142 ntBASIC4.16□□□□□ -1.74
ALDH1A1P00352 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.16□□□□□ -1.74
ALDH1A1P00352 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ALDH1A1P00352 RNA5SP502-201ENST00000362694 119 ntBASIC4.16□□□□□ -1.74
ALDH1A1P00352 RNY4P6-201ENST00000363667 96 ntBASIC4.16□□□□□ -1.74
ALDH1A1P00352 RNU6-1210P-201ENST00000363775 107 ntBASIC4.16□□□□□ -1.74
ALDH1A1P00352 RNU4-13P-201ENST00000364019 141 ntBASIC4.16□□□□□ -1.74
ALDH1A1P00352 RNU6-1134P-201ENST00000365156 101 ntBASIC4.16□□□□□ -1.74
ALDH1A1P00352 MIR607-201ENST00000385241 96 ntBASIC4.16□□□□□ -1.74
ALDH1A1P00352 Y_RNA.593-201ENST00000410292 98 ntBASIC4.16□□□□□ -1.74
ALDH1A1P00352 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.16□□□□□ -1.74
ALDH1A1P00352 PGBD4P5-201ENST00000445958 426 ntBASIC4.16□□□□□ -1.74
ALDH1A1P00352 RNU7-57P-201ENST00000459540 60 ntBASIC4.16□□□□□ -1.74
ALDH1A1P00352 AC093663.1-201ENST00000497190 394 ntBASIC4.16□□□□□ -1.74
ALDH1A1P00352 AC005921.1-201ENST00000510589 286 ntBASIC4.16□□□□□ -1.74
ALDH1A1P00352 AC011602.1-201ENST00000546484 331 ntBASIC4.16□□□□□ -1.74
ALDH1A1P00352 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.16□□□□□ -1.74
ALDH1A1P00352 MIR5004-201ENST00000579078 107 ntBASIC4.16□□□□□ -1.74
ALDH1A1P00352 HMGN2P15-201ENST00000585707 270 ntBASIC4.16□□□□□ -1.74
ALDH1A1P00352 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.16□□□□□ -1.74
ALDH1A1P00352 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
ALDH1A1P00352 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
ALDH1A1P00352 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ALDH1A1P00352 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ALDH1A1P00352 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
ALDH1A1P00352 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.15□□□□□ -1.74
ALDH1A1P00352 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
ALDH1A1P00352 MIR302B-201ENST00000362188 73 ntBASIC4.15□□□□□ -1.75
ALDH1A1P00352 RNA5SP374-201ENST00000362939 125 ntBASIC4.15□□□□□ -1.75
ALDH1A1P00352 RNU6-1209P-201ENST00000363655 107 ntBASIC4.15□□□□□ -1.75
ALDH1A1P00352 MIR181A2-201ENST00000384863 110 ntBASIC4.15□□□□□ -1.75
ALDH1A1P00352 SNORD17-201ENST00000390930 237 ntBASIC4.15□□□□□ -1.75
ALDH1A1P00352 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ALDH1A1P00352 AC245291.1-201ENST00000419501 328 ntBASIC4.15□□□□□ -1.75
ALDH1A1P00352 AC018634.1-201ENST00000437554 401 ntBASIC4.15□□□□□ -1.75
ALDH1A1P00352 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.15□□□□□ -1.75
ALDH1A1P00352 SNORA70.18-201ENST00000516696 98 ntBASIC4.15□□□□□ -1.75
ALDH1A1P00352 SNORD19.2-201ENST00000516978 73 ntBASIC4.15□□□□□ -1.75
ALDH1A1P00352 AL162274.2-201ENST00000614406 332 ntBASIC4.15□□□□□ -1.75
ALDH1A1P00352 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ALDH1A1P00352 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ALDH1A1P00352 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
ALDH1A1P00352 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
ALDH1A1P00352 USP8P1-201ENST00000494673 3183 ntBASIC4.14□□□□□ -1.75
ALDH1A1P00352 Y_RNA.93-201ENST00000363066 109 ntBASIC4.14□□□□□ -1.75
ALDH1A1P00352 SNORD14D-201ENST00000384390 87 ntBASIC4.14□□□□□ -1.75
ALDH1A1P00352 RNU6-972P-201ENST00000391208 107 ntBASIC4.14□□□□□ -1.75
ALDH1A1P00352 AL117342.1-201ENST00000404861 406 ntBASIC4.14□□□□□ -1.75
ALDH1A1P00352 AC023141.4-201ENST00000412031 328 ntBASIC4.14□□□□□ -1.75
ALDH1A1P00352 RNU6-221P-201ENST00000459541 99 ntBASIC4.14□□□□□ -1.75
ALDH1A1P00352 AC011406.1-201ENST00000512440 370 ntBASIC4.14□□□□□ -1.75
ALDH1A1P00352 RNU6-1098P-201ENST00000516772 96 ntBASIC4.14□□□□□ -1.75
ALDH1A1P00352 IGLV3-26-201ENST00000520756 302 ntBASIC4.14□□□□□ -1.75
ALDH1A1P00352 IGKV3-31-201ENST00000523109 329 ntBASIC4.14□□□□□ -1.75
ALDH1A1P00352 HSPE1P7-201ENST00000604681 321 ntBASIC4.14□□□□□ -1.75
ALDH1A1P00352 AP003355.3-201ENST00000623465 114 ntBASIC4.14□□□□□ -1.75
ALDH1A1P00352 AC006386.2-201ENST00000624491 75 ntBASIC4.14□□□□□ -1.75
ALDH1A1P00352 AC012005.1-201ENST00000624575 75 ntBASIC4.14□□□□□ -1.75
ALDH1A1P00352 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
ALDH1A1P00352 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
ALDH1A1P00352 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
ALDH1A1P00352 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ALDH1A1P00352 AL365361.1-201ENST00000566942 3481 ntBASIC4.13□□□□□ -1.75
ALDH1A1P00352 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.13□□□□□ -1.75
ALDH1A1P00352 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.13□□□□□ -1.75
ALDH1A1P00352 snoU2_19.1-201ENST00000362361 80 ntBASIC4.13□□□□□ -1.75
ALDH1A1P00352 RNU6-655P-201ENST00000362858 107 ntBASIC4.13□□□□□ -1.75
ALDH1A1P00352 RNA5SP189-201ENST00000364920 115 ntBASIC4.13□□□□□ -1.75
ALDH1A1P00352 RNA5SP167-201ENST00000365461 116 ntBASIC4.13□□□□□ -1.75
ALDH1A1P00352 MIR93-201ENST00000385024 80 ntBASIC4.13□□□□□ -1.75
ALDH1A1P00352 RNA5SP354-201ENST00000391247 136 ntBASIC4.13□□□□□ -1.75
ALDH1A1P00352 MIR1255A-201ENST00000408338 113 ntBASIC4.13□□□□□ -1.75
ALDH1A1P00352 RN7SKP111-201ENST00000410349 271 ntBASIC4.13□□□□□ -1.75
ALDH1A1P00352 AC063976.3-201ENST00000426849 329 ntBASIC4.13□□□□□ -1.75
ALDH1A1P00352 AC080013.2-201ENST00000460866 323 ntBASIC4.13□□□□□ -1.75
ALDH1A1P00352 RN7SL504P-201ENST00000494496 287 ntBASIC4.13□□□□□ -1.75
ALDH1A1P00352 RNU6-504P-201ENST00000516568 104 ntBASIC4.13□□□□□ -1.75
ALDH1A1P00352 RNU6-1149P-201ENST00000516810 97 ntBASIC4.13□□□□□ -1.75
ALDH1A1P00352 AC107934.2-201ENST00000518653 310 ntBASIC4.13□□□□□ -1.75
ALDH1A1P00352 IGHVIII-67-2-201ENST00000519849 88 ntBASIC4.13□□□□□ -1.75
ALDH1A1P00352 AC027419.1-201ENST00000522976 328 ntBASIC4.13□□□□□ -1.75
ALDH1A1P00352 AC141557.1-201ENST00000540982 400 ntBASIC4.13□□□□□ -1.75
ALDH1A1P00352 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
ALDH1A1P00352 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
ALDH1A1P00352 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
ALDH1A1P00352 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
ALDH1A1P00352 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ALDH1A1P00352 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
ALDH1A1P00352 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ALDH1A1P00352 SNORA31-201ENST00000362607 130 ntBASIC4.12□□□□□ -1.75
ALDH1A1P00352 Y_RNA.221-201ENST00000364248 96 ntBASIC4.12□□□□□ -1.75
ALDH1A1P00352 MIR1283-1-201ENST00000408494 87 ntBASIC4.12□□□□□ -1.75
ALDH1A1P00352 RNA5SP39-201ENST00000411245 120 ntBASIC4.12□□□□□ -1.75
ALDH1A1P00352 AC004552.1-201ENST00000419089 348 ntBASIC4.12□□□□□ -1.75
ALDH1A1P00352 U3.44-201ENST00000458938 192 ntBASIC4.12□□□□□ -1.75
ALDH1A1P00352 RPS26P3-201ENST00000470205 348 ntBASIC4.12□□□□□ -1.75
ALDH1A1P00352 AC084357.1-201ENST00000473404 255 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms