Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 HMGB3P17-201ENST00000504195 649 ntBASIC1.99□□□□□ -2.09
MBD4O95243 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
MBD4O95243 SNORA20.3-201ENST00000516880 132 ntBASIC1.99□□□□□ -2.09
MBD4O95243 CYCSP23-201ENST00000519781 313 ntBASIC1.99□□□□□ -2.09
MBD4O95243 CBX3P4-201ENST00000538909 354 ntBASIC1.99□□□□□ -2.09
MBD4O95243 MZT1P2-201ENST00000604387 248 ntBASIC1.99□□□□□ -2.09
MBD4O95243 MTND5P35-201ENST00000557537 1720 ntBASIC1.99□□□□□ -2.09
MBD4O95243 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
MBD4O95243 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
MBD4O95243 RNU6-1266P-201ENST00000362794 105 ntBASIC1.98□□□□□ -2.09
MBD4O95243 RNU6-414P-201ENST00000363705 104 ntBASIC1.98□□□□□ -2.09
MBD4O95243 Y_RNA.404-201ENST00000383978 102 ntBASIC1.98□□□□□ -2.09
MBD4O95243 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
MBD4O95243 AC138393.2-201ENST00000414742 246 ntBASIC1.98□□□□□ -2.09
MBD4O95243 AC016909.1-201ENST00000415916 166 ntBASIC1.98□□□□□ -2.09
MBD4O95243 RPL23AP50-201ENST00000434149 455 ntBASIC1.98□□□□□ -2.09
MBD4O95243 AC024995.1-201ENST00000523014 93 ntBASIC1.98□□□□□ -2.09
MBD4O95243 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.98□□□□□ -2.09
MBD4O95243 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.98□□□□□ -2.09
MBD4O95243 AC092794.2-201ENST00000620933 563 ntBASIC1.98□□□□□ -2.09
MBD4O95243 AL669831.3-213ENST00000636676 183 ntBASIC1.98□□□□□ -2.09
MBD4O95243 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
MBD4O95243 RNU6-417P-201ENST00000384712 107 ntBASIC1.97□□□□□ -2.09
MBD4O95243 RNU6-360P-201ENST00000390944 104 ntBASIC1.97□□□□□ -2.09
MBD4O95243 RPL31P63-201ENST00000422565 375 ntBASIC1.97□□□□□ -2.09
MBD4O95243 EIF1P2-201ENST00000428233 350 ntBASIC1.97□□□□□ -2.09
MBD4O95243 HSPE1P9-201ENST00000440046 311 ntBASIC1.97□□□□□ -2.09
MBD4O95243 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.97□□□□□ -2.09
MBD4O95243 RPL17P19-201ENST00000489069 552 ntBASIC1.97□□□□□ -2.09
MBD4O95243 SCARNA16.2-201ENST00000516520 172 ntBASIC1.97□□□□□ -2.09
MBD4O95243 RNA5SP437-201ENST00000517249 129 ntBASIC1.97□□□□□ -2.09
MBD4O95243 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.97□□□□□ -2.09
MBD4O95243 AC004584.2-201ENST00000570407 410 ntBASIC1.97□□□□□ -2.09
MBD4O95243 AC024614.2-201ENST00000577584 372 ntBASIC1.97□□□□□ -2.09
MBD4O95243 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.97□□□□□ -2.09
MBD4O95243 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.97□□□□□ -2.09
MBD4O95243 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.97□□□□□ -2.09
MBD4O95243 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
MBD4O95243 ZNF72P-201ENST00000425869 1908 ntBASIC1.96□□□□□ -2.1
MBD4O95243 RNU6-457P-201ENST00000363999 107 ntBASIC1.96□□□□□ -2.1
MBD4O95243 RNU6-439P-201ENST00000384188 106 ntBASIC1.96□□□□□ -2.1
MBD4O95243 RNU6-331P-201ENST00000384724 107 ntBASIC1.96□□□□□ -2.1
MBD4O95243 MIR934-201ENST00000401241 83 ntBASIC1.96□□□□□ -2.1
MBD4O95243 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.96□□□□□ -2.1
MBD4O95243 TOMM22P2-201ENST00000430735 237 ntBASIC1.96□□□□□ -2.1
MBD4O95243 HSPE1P21-201ENST00000438283 308 ntBASIC1.96□□□□□ -2.1
MBD4O95243 RNU7-87P-201ENST00000459343 62 ntBASIC1.96□□□□□ -2.1
MBD4O95243 MTND4P17-201ENST00000470444 350 ntBASIC1.96□□□□□ -2.1
MBD4O95243 AC027575.1-201ENST00000481064 460 ntBASIC1.96□□□□□ -2.1
MBD4O95243 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.96□□□□□ -2.1
MBD4O95243 AK6P2-201ENST00000549020 471 ntBASIC1.96□□□□□ -2.1
MBD4O95243 AC016727.1-205ENST00000605437 569 ntBASIC1.96□□□□□ -2.1
MBD4O95243 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
MBD4O95243 Y_RNA.287-201ENST00000364853 94 ntBASIC1.95□□□□□ -2.1
MBD4O95243 RNU6-370P-201ENST00000411008 104 ntBASIC1.95□□□□□ -2.1
MBD4O95243 MTND4P18-201ENST00000447010 465 ntBASIC1.95□□□□□ -2.1
MBD4O95243 HMGN1P12-201ENST00000499125 195 ntBASIC1.95□□□□□ -2.1
MBD4O95243 MIR3122-201ENST00000577243 73 ntBASIC1.95□□□□□ -2.1
MBD4O95243 AC022432.1-201ENST00000595739 310 ntBASIC1.95□□□□□ -2.1
MBD4O95243 AC006026.1-201ENST00000444025 1803 ntBASIC1.95□□□□□ -2.1
MBD4O95243 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
MBD4O95243 MIR424-201ENST00000362227 98 ntBASIC1.94□□□□□ -2.1
MBD4O95243 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.94□□□□□ -2.1
MBD4O95243 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
MBD4O95243 RNA5SP323-201ENST00000391094 133 ntBASIC1.94□□□□□ -2.1
MBD4O95243 MIR1267-201ENST00000408723 78 ntBASIC1.94□□□□□ -2.1
MBD4O95243 Y_RNA.595-201ENST00000410403 105 ntBASIC1.94□□□□□ -2.1
MBD4O95243 RNU6-1001P-201ENST00000411265 100 ntBASIC1.94□□□□□ -2.1
MBD4O95243 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.94□□□□□ -2.1
MBD4O95243 AC092423.1-201ENST00000430165 186 ntBASIC1.94□□□□□ -2.1
MBD4O95243 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.94□□□□□ -2.1
MBD4O95243 APOOP3-201ENST00000536787 586 ntBASIC1.94□□□□□ -2.1
MBD4O95243 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.94□□□□□ -2.1
MBD4O95243 MIR5690-201ENST00000583739 73 ntBASIC1.94□□□□□ -2.1
MBD4O95243 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.94□□□□□ -2.1
MBD4O95243 AC125232.2-201ENST00000592457 143 ntBASIC1.94□□□□□ -2.1
MBD4O95243 AL355073.2-201ENST00000612106 557 ntBASIC1.94□□□□□ -2.1
MBD4O95243 AL359075.3-201ENST00000613288 217 ntBASIC1.94□□□□□ -2.1
MBD4O95243 RNU6-1283P-201ENST00000365314 105 ntBASIC1.93□□□□□ -2.1
MBD4O95243 RNU4-14P-201ENST00000410858 122 ntBASIC1.93□□□□□ -2.1
MBD4O95243 RN7SKP101-201ENST00000411376 320 ntBASIC1.93□□□□□ -2.1
MBD4O95243 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.93□□□□□ -2.1
MBD4O95243 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.93□□□□□ -2.1
MBD4O95243 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.93□□□□□ -2.1
MBD4O95243 RPL26P26-201ENST00000480251 434 ntBASIC1.93□□□□□ -2.1
MBD4O95243 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.93□□□□□ -2.1
MBD4O95243 RNU6-107P-201ENST00000516643 102 ntBASIC1.93□□□□□ -2.1
MBD4O95243 HSBP1P1-201ENST00000555205 166 ntBASIC1.93□□□□□ -2.1
MBD4O95243 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.93□□□□□ -2.1
MBD4O95243 MIR4303-201ENST00000581299 66 ntBASIC1.93□□□□□ -2.1
MBD4O95243 AC025253.1-201ENST00000613623 543 ntBASIC1.93□□□□□ -2.1
MBD4O95243 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.93□□□□□ -2.1
MBD4O95243 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
MBD4O95243 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.92□□□□□ -2.1
MBD4O95243 WWP1P1-201ENST00000466609 2769 ntBASIC1.92□□□□□ -2.1
MBD4O95243 RNU6-874P-201ENST00000362390 105 ntBASIC1.92□□□□□ -2.1
MBD4O95243 Y_RNA.140-201ENST00000363474 103 ntBASIC1.92□□□□□ -2.1
MBD4O95243 SNORA33-201ENST00000363664 130 ntBASIC1.92□□□□□ -2.1
MBD4O95243 Y_RNA.557-201ENST00000384680 107 ntBASIC1.92□□□□□ -2.1
MBD4O95243 MIR329-1-201ENST00000385028 80 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms